RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 PRG4Q92954 1404 aaPredicted RBP38.14■■■■□ 3.7
PACRGL-233ENST00000515339 JPH4Q96JJ6 628 aa38.11■■■■□ 3.69
PACRGL-233ENST00000515339 CARMIL1Q5VZK9 1371 aa38.02■■■■□ 3.68
PACRGL-233ENST00000515339 KIAA0586Q9BVV6 1533 aa38■■■■□ 3.67
PACRGL-233ENST00000515339 IQGAP2Q13576 1575 aa37.73■■■■□ 3.63
PACRGL-233ENST00000515339 RAPGEF2Q9Y4G8 1499 aa37.72■■■■□ 3.63
PACRGL-233ENST00000515339 ADCY10Q96PN6 1610 aa37.69■■■■□ 3.62
PACRGL-233ENST00000515339 KIF13AQ9H1H9 1805 aa37.6■■■■□ 3.61
PACRGL-233ENST00000515339 CARMIL2Q6F5E8 1435 aa37.6■■■■□ 3.61
PACRGL-233ENST00000515339 TTBK1Q5TCY1 1321 aaPredicted RBP37.58■■■■□ 3.61
PACRGL-233ENST00000515339 PTPRGP23470 1445 aa37.57■■■■□ 3.6
PACRGL-233ENST00000515339 NPM1P06748 294 aaKnown RBP eCLIP37.56■■■■□ 3.6
PACRGL-233ENST00000515339 TNIKQ9UKE5 1360 aa37.54■■■■□ 3.6
PACRGL-233ENST00000515339 DISP1Q96F81 1524 aa37.51■■■■□ 3.6
PACRGL-233ENST00000515339 MAPKBP1O60336 1514 aa37.51■■■■□ 3.59
PACRGL-233ENST00000515339 UGGT2Q9NYU1 1516 aa37.48■■■■□ 3.59
PACRGL-233ENST00000515339 CTTNBP2Q8WZ74 1663 aa37.47■■■■□ 3.59
PACRGL-233ENST00000515339 PRXQ9BXM0 1461 aa37.44■■■■□ 3.58
PACRGL-233ENST00000515339 ABCC10Q5T3U5 1492 aa37.43■■■■□ 3.58
PACRGL-233ENST00000515339 KIAA0556O60303 1618 aa37.39■■■■□ 3.58
PACRGL-233ENST00000515339 DIP2BQ9P265 1576 aa37.39■■■■□ 3.58
PACRGL-233ENST00000515339 FAM69CQ0P6D2 419 aa37.38■■■■□ 3.57
PACRGL-233ENST00000515339 ABCC2Q92887 1545 aa37.34■■■■□ 3.57
PACRGL-233ENST00000515339 UACAQ9BZF9 1416 aa37.3■■■■□ 3.56
PACRGL-233ENST00000515339 UHRF1BP1LA0JNW5 1464 aa37.29■■■■□ 3.56
PACRGL-233ENST00000515339 CSRNP3Q8WYN3 585 aa37.23■■■■□ 3.55
PACRGL-233ENST00000515339 GOLGA3Q08378 1498 aa37.2■■■■□ 3.54
PACRGL-233ENST00000515339 ASXL2Q76L83 1435 aa37.18■■■■□ 3.54
PACRGL-233ENST00000515339 TSPOAP1O95153 1857 aa37.16■■■■□ 3.54
PACRGL-233ENST00000515339 KDM5BQ9UGL1 1544 aa37.14■■■■□ 3.54
PACRGL-233ENST00000515339 PLB1Q6P1J6 1458 aa37.13■■■■□ 3.53
PACRGL-233ENST00000515339 EEA1Q15075 1411 aa37.12■■■■□ 3.53
PACRGL-233ENST00000515339 ZCCHC11Q5TAX3 1644 aaKnown RBP37.12■■■■□ 3.53
PACRGL-233ENST00000515339 FAM9AQ8IZU1 332 aaPredicted RBP37.05■■■■□ 3.52
PACRGL-233ENST00000515339 ABCA8O94911 1581 aa37.01■■■■□ 3.52
PACRGL-233ENST00000515339 GLI2P10070 1586 aa37.01■■■■□ 3.52
PACRGL-233ENST00000515339 KDM6BO15054 1643 aa36.96■■■■□ 3.51
PACRGL-233ENST00000515339 EPRSP07814 1512 aaKnown RBP36.96■■■■□ 3.51
PACRGL-233ENST00000515339 P3H3Q8IVL6 736 aa36.96■■■■□ 3.51
PACRGL-233ENST00000515339 PPRC1Q5VV67 1664 aaKnown RBP36.94■■■■□ 3.5
PACRGL-233ENST00000515339 SAMD9Q5K651 1589 aa36.93■■■■□ 3.5
PACRGL-233ENST00000515339 CHIC1Q5VXU3 224 aa36.91■■■■□ 3.5
PACRGL-233ENST00000515339 WDR7Q9Y4E6 1490 aa36.88■■■■□ 3.49
PACRGL-233ENST00000515339 KIF21BO75037 1637 aa36.86■■■■□ 3.49
PACRGL-233ENST00000515339 MAP3K4Q9Y6R4 1608 aa36.86■■■■□ 3.49
PACRGL-233ENST00000515339 RANGAP1P46060 587 aaPredicted RBP36.81■■■■□ 3.48
PACRGL-233ENST00000515339 AEBP2Q6ZN18 517 aaPredicted RBP36.8■■■■□ 3.48
PACRGL-233ENST00000515339 ARID3CA6NKF2 412 aa36.76■■■■□ 3.48
PACRGL-233ENST00000515339 RAPGEF6Q8TEU7 1601 aa36.71■■■■□ 3.47
PACRGL-233ENST00000515339 KCNH8Q96L42 1107 aa36.7■■■■□ 3.47
PACRGL-233ENST00000515339 ATP10BO94823 1461 aa36.69■■■■□ 3.46
PACRGL-233ENST00000515339 FHOD3Q2V2M9 1422 aa36.69■■■■□ 3.46
PACRGL-233ENST00000515339 TEX14Q8IWB6 1497 aa36.69■■■■□ 3.46
PACRGL-233ENST00000515339 EHMT2Q96KQ7 1210 aa36.68■■■■□ 3.46
PACRGL-233ENST00000515339 CFAP43Q8NDM7 1665 aa36.65■■■■□ 3.46
PACRGL-233ENST00000515339 COL17A1Q9UMD9 1497 aaPredicted RBP36.62■■■■□ 3.45
PACRGL-233ENST00000515339 EFCAB5A4FU69 1503 aa36.6■■■■□ 3.45
PACRGL-233ENST00000515339 CD109Q6YHK3 1445 aa36.59■■■■□ 3.45
PACRGL-233ENST00000515339 NUP153P49790 1475 aaKnown RBP36.56■■■■□ 3.44
PACRGL-233ENST00000515339 UBTFP17480 764 aaKnown RBP36.55■■■■□ 3.44
PACRGL-233ENST00000515339 MAGI3Q5TCQ9 1506 aa36.54■■■■□ 3.44
PACRGL-233ENST00000515339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.5■■■■□ 3.43
PACRGL-233ENST00000515339 HNRNPUL2Q1KMD3 747 aaKnown RBP36.5■■■■□ 3.43
PACRGL-233ENST00000515339 ABCA9Q8IUA7 1624 aa36.45■■■■□ 3.42
PACRGL-233ENST00000515339 KDM4FA0A1W2PPD8 638 aa36.39■■■■□ 3.42
PACRGL-233ENST00000515339 ARHGAP35Q9NRY4 1499 aa36.36■■■■□ 3.41
PACRGL-233ENST00000515339 CDK13Q14004 1512 aaKnown RBP36.29■■■■□ 3.4
PACRGL-233ENST00000515339 PLEKHD1A6NEE1 506 aa36.27■■■■□ 3.4
PACRGL-233ENST00000515339 ARAP3Q8WWN8 1544 aa36.25■■■■□ 3.39
PACRGL-233ENST00000515339 FMN1Q68DA7 1419 aa36.25■■■■□ 3.39
PACRGL-233ENST00000515339 ADGRL1O94910 1474 aa36.23■■■■□ 3.39
PACRGL-233ENST00000515339 HECW1Q76N89 1606 aa36.21■■■■□ 3.39
PACRGL-233ENST00000515339 ATP1B4Q9UN42 357 aaPredicted RBP36.19■■■■□ 3.38
PACRGL-233ENST00000515339 NEO1Q92859 1461 aa36.18■■■■□ 3.38
PACRGL-233ENST00000515339 PHLDB1Q86UU1 1377 aa36.16■■■■□ 3.38
PACRGL-233ENST00000515339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.16■■■■□ 3.38
PACRGL-233ENST00000515339 TTC37Q6PGP7 1564 aa36.15■■■■□ 3.38
PACRGL-233ENST00000515339 RAPGEF3O95398 923 aa36.07■■■■□ 3.36
PACRGL-233ENST00000515339 LRRIQ1Q96JM4 1722 aa36.06■■■■□ 3.36
PACRGL-233ENST00000515339 FRMPD1Q5SYB0 1578 aa36.05■■■■□ 3.36
PACRGL-233ENST00000515339 FANCAO15360 1455 aa36.02■■■■□ 3.36
PACRGL-233ENST00000515339 CFAP74Q9C0B2 1584 aa36.02■■■■□ 3.36
PACRGL-233ENST00000515339 PCF11O94913 1555 aaKnown RBP35.99■■■■□ 3.35
PACRGL-233ENST00000515339 AKNAQ7Z591 1439 aa35.99■■■■□ 3.35
PACRGL-233ENST00000515339 KIF14Q15058 1648 aa35.95■■■■□ 3.35
PACRGL-233ENST00000515339 CDK11AQ9UQ88 783 aaPredicted RBP35.95■■■■□ 3.35
PACRGL-233ENST00000515339 RICTORQ6R327 1708 aa35.94■■■■□ 3.34
PACRGL-233ENST00000515339 DENND4BO75064 1496 aaPredicted RBP35.92■■■■□ 3.34
PACRGL-233ENST00000515339 CASKIN1Q8WXD9 1431 aa35.92■■■■□ 3.34
PACRGL-233ENST00000515339 CLIP1P30622 1438 aa35.91■■■■□ 3.34
PACRGL-233ENST00000515339 TROQ12816 1431 aaPredicted RBP35.91■■■■□ 3.34
PACRGL-233ENST00000515339 MYO5CQ9NQX4 1742 aa35.9■■■■□ 3.34
PACRGL-233ENST00000515339 PLCH2O75038 1416 aa35.9■■■■□ 3.34
PACRGL-233ENST00000515339 CCDC18Q5T9S5 1454 aa35.84■■■■□ 3.33
PACRGL-233ENST00000515339 FYCO1Q9BQS8 1478 aa35.81■■■■□ 3.32
PACRGL-233ENST00000515339 ARHGEF40Q8TER5 1519 aa35.81■■■■□ 3.32
PACRGL-233ENST00000515339 ZMYM4Q5VZL5 1548 aa35.78■■■■□ 3.32
PACRGL-233ENST00000515339 SCAPERQ9BY12 1400 aa35.76■■■■□ 3.32
PACRGL-233ENST00000515339 EFCAB2Q5VUJ9 269 aa35.74■■■■□ 3.31
PACRGL-233ENST00000515339 POGZQ7Z3K3 1410 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms