RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 RIMBP3CA6NJZ7 1639 aa25.79■■□□□ 1.72
MATR3-239ENST00000514694 RIMBP3BA6NNM3 1639 aa25.79■■□□□ 1.72
MATR3-239ENST00000514694 RIMBP3Q9UFD9 1639 aa25.79■■□□□ 1.72
MATR3-239ENST00000514694 KIAA0586Q9BVV6 1533 aa25.73■■□□□ 1.71
MATR3-239ENST00000514694 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
MATR3-239ENST00000514694 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
MATR3-239ENST00000514694 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
MATR3-239ENST00000514694 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
MATR3-239ENST00000514694 PRG4Q92954 1404 aaPredicted RBP25.63■■□□□ 1.69
MATR3-239ENST00000514694 IQGAP2Q13576 1575 aa25.6■■□□□ 1.69
MATR3-239ENST00000514694 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
MATR3-239ENST00000514694 KIF21BO75037 1637 aa25.56■■□□□ 1.68
MATR3-239ENST00000514694 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
MATR3-239ENST00000514694 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
MATR3-239ENST00000514694 UGGT2Q9NYU1 1516 aa25.48■■□□□ 1.67
MATR3-239ENST00000514694 DISP1Q96F81 1524 aa25.47■■□□□ 1.67
MATR3-239ENST00000514694 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
MATR3-239ENST00000514694 CARMIL2Q6F5E8 1435 aa25.39■■□□□ 1.66
MATR3-239ENST00000514694 KIAA0556O60303 1618 aa25.37■■□□□ 1.65
MATR3-239ENST00000514694 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
MATR3-239ENST00000514694 TNIKQ9UKE5 1360 aa25.34■■□□□ 1.65
MATR3-239ENST00000514694 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
MATR3-239ENST00000514694 PTPRGP23470 1445 aa25.32■■□□□ 1.64
MATR3-239ENST00000514694 RANGAP1P46060 587 aaPredicted RBP25.31■■□□□ 1.64
MATR3-239ENST00000514694 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
MATR3-239ENST00000514694 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
MATR3-239ENST00000514694 ADCY10Q96PN6 1610 aa25.22■■□□□ 1.63
MATR3-239ENST00000514694 FHOD3Q2V2M9 1422 aa25.17■■□□□ 1.62
MATR3-239ENST00000514694 UACAQ9BZF9 1416 aa25.16■■□□□ 1.62
MATR3-239ENST00000514694 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
MATR3-239ENST00000514694 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
MATR3-239ENST00000514694 EFCAB5A4FU69 1503 aa25.14■■□□□ 1.62
MATR3-239ENST00000514694 ARHGAP35Q9NRY4 1499 aa25.13■■□□□ 1.61
MATR3-239ENST00000514694 UHRF1BP1LA0JNW5 1464 aa25.12■■□□□ 1.61
MATR3-239ENST00000514694 ABCC2Q92887 1545 aa25.11■■□□□ 1.61
MATR3-239ENST00000514694 ABCA8O94911 1581 aa25.1■■□□□ 1.61
MATR3-239ENST00000514694 NPM1P06748 294 aaKnown RBP eCLIP25.02■■□□□ 1.6
MATR3-239ENST00000514694 KDM5BQ9UGL1 1544 aa25.02■■□□□ 1.6
MATR3-239ENST00000514694 CLIP1P30622 1438 aa25.01■■□□□ 1.59
MATR3-239ENST00000514694 MAPKBP1O60336 1514 aa24.98■■□□□ 1.59
MATR3-239ENST00000514694 ARID3CA6NKF2 412 aa24.97■■□□□ 1.59
MATR3-239ENST00000514694 TRHP20396 242 aaPredicted RBP24.96■■□□□ 1.59
MATR3-239ENST00000514694 RAPGEF6Q8TEU7 1601 aa24.96■■□□□ 1.59
MATR3-239ENST00000514694 CEP162Q5TB80 1403 aa24.95■■□□□ 1.59
MATR3-239ENST00000514694 ZCCHC11Q5TAX3 1644 aaKnown RBP24.95■■□□□ 1.58
MATR3-239ENST00000514694 NUP153P49790 1475 aaKnown RBP24.95■■□□□ 1.58
MATR3-239ENST00000514694 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
MATR3-239ENST00000514694 ASXL2Q76L83 1435 aa24.92■■□□□ 1.58
MATR3-239ENST00000514694 ATP10BO94823 1461 aa24.91■■□□□ 1.58
MATR3-239ENST00000514694 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
MATR3-239ENST00000514694 ABCC10Q5T3U5 1492 aa24.87■■□□□ 1.57
MATR3-239ENST00000514694 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
MATR3-239ENST00000514694 FAM69CQ0P6D2 419 aa24.81■■□□□ 1.56
MATR3-239ENST00000514694 KIF13AQ9H1H9 1805 aa24.81■■□□□ 1.56
MATR3-239ENST00000514694 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
MATR3-239ENST00000514694 WDR7Q9Y4E6 1490 aa24.8■■□□□ 1.56
MATR3-239ENST00000514694 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
MATR3-239ENST00000514694 CDK13Q14004 1512 aaKnown RBP24.79■■□□□ 1.56
MATR3-239ENST00000514694 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
MATR3-239ENST00000514694 EPRSP07814 1512 aaKnown RBP24.77■■□□□ 1.56
MATR3-239ENST00000514694 HECW1Q76N89 1606 aa24.76■■□□□ 1.55
MATR3-239ENST00000514694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
MATR3-239ENST00000514694 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
MATR3-239ENST00000514694 KCNH8Q96L42 1107 aa24.71■■□□□ 1.55
MATR3-239ENST00000514694 LRRIQ1Q96JM4 1722 aa24.71■■□□□ 1.55
MATR3-239ENST00000514694 GLI2P10070 1586 aa24.71■■□□□ 1.55
MATR3-239ENST00000514694 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.55
MATR3-239ENST00000514694 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
MATR3-239ENST00000514694 PLEKHD1A6NEE1 506 aa24.63■■□□□ 1.53
MATR3-239ENST00000514694 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
MATR3-239ENST00000514694 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
MATR3-239ENST00000514694 CCDC18Q5T9S5 1454 aa24.61■■□□□ 1.53
MATR3-239ENST00000514694 MAGI3Q5TCQ9 1506 aa24.58■■□□□ 1.53
MATR3-239ENST00000514694 PPRC1Q5VV67 1664 aaKnown RBP24.58■■□□□ 1.53
MATR3-239ENST00000514694 TSPOAP1O95153 1857 aa24.57■■□□□ 1.52
MATR3-239ENST00000514694 CD109Q6YHK3 1445 aa24.55■■□□□ 1.52
MATR3-239ENST00000514694 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
MATR3-239ENST00000514694 TROQ12816 1431 aaPredicted RBP24.54■■□□□ 1.52
MATR3-239ENST00000514694 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
MATR3-239ENST00000514694 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
MATR3-239ENST00000514694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.51■■□□□ 1.512e-7■□□□□ 10.6
MATR3-239ENST00000514694 KIF14Q15058 1648 aa24.51■■□□□ 1.51
MATR3-239ENST00000514694 TTC37Q6PGP7 1564 aa24.5■■□□□ 1.51
MATR3-239ENST00000514694 TEX14Q8IWB6 1497 aa24.44■■□□□ 1.5
MATR3-239ENST00000514694 COL17A1Q9UMD9 1497 aaPredicted RBP24.42■■□□□ 1.5
MATR3-239ENST00000514694 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
MATR3-239ENST00000514694 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
MATR3-239ENST00000514694 PLCH2O75038 1416 aa24.36■■□□□ 1.49
MATR3-239ENST00000514694 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
MATR3-239ENST00000514694 KDM6BO15054 1643 aa24.35■■□□□ 1.49
MATR3-239ENST00000514694 EHBP1L1Q8N3D4 1523 aa24.35■■□□□ 1.49
MATR3-239ENST00000514694 MAP3K1Q13233 1512 aa24.34■■□□□ 1.49
MATR3-239ENST00000514694 FANCAO15360 1455 aa24.32■■□□□ 1.48
MATR3-239ENST00000514694 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
MATR3-239ENST00000514694 NEO1Q92859 1461 aa24.32■■□□□ 1.48
MATR3-239ENST00000514694 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
MATR3-239ENST00000514694 ARAP3Q8WWN8 1544 aa24.28■■□□□ 1.48
MATR3-239ENST00000514694 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
MATR3-239ENST00000514694 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
MATR3-239ENST00000514694 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms