RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 NISCHQ9Y2I1 1504 aa37.27■■■■□ 3.56
MATR3-239ENST00000514694 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
MATR3-239ENST00000514694 ABCC9O60706 1549 aa32.21■■■□□ 2.75
MATR3-239ENST00000514694 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
MATR3-239ENST00000514694 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
MATR3-239ENST00000514694 NACADO15069 1562 aa30.96■■■□□ 2.55
MATR3-239ENST00000514694 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
MATR3-239ENST00000514694 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
MATR3-239ENST00000514694 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
MATR3-239ENST00000514694 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
MATR3-239ENST00000514694 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
MATR3-239ENST00000514694 PABPN1Q86U42 306 aaKnown RBP eCLIP30.16■■■□□ 2.42
MATR3-239ENST00000514694 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
MATR3-239ENST00000514694 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
MATR3-239ENST00000514694 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
MATR3-239ENST00000514694 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
MATR3-239ENST00000514694 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
MATR3-239ENST00000514694 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
MATR3-239ENST00000514694 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
MATR3-239ENST00000514694 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
MATR3-239ENST00000514694 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
MATR3-239ENST00000514694 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
MATR3-239ENST00000514694 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
MATR3-239ENST00000514694 NCAPD3P42695 1498 aa28.63■■■□□ 2.17
MATR3-239ENST00000514694 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
MATR3-239ENST00000514694 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
MATR3-239ENST00000514694 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
MATR3-239ENST00000514694 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
MATR3-239ENST00000514694 WIZO95785 1651 aa28.44■■■□□ 2.14
MATR3-239ENST00000514694 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
MATR3-239ENST00000514694 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
MATR3-239ENST00000514694 NESP48681 1621 aa27.95■■■□□ 2.06
MATR3-239ENST00000514694 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
MATR3-239ENST00000514694 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.05
MATR3-239ENST00000514694 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
MATR3-239ENST00000514694 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
MATR3-239ENST00000514694 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
MATR3-239ENST00000514694 CFTRP13569 1480 aa27.68■■■□□ 2.02
MATR3-239ENST00000514694 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
MATR3-239ENST00000514694 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
MATR3-239ENST00000514694 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
MATR3-239ENST00000514694 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
MATR3-239ENST00000514694 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
MATR3-239ENST00000514694 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
MATR3-239ENST00000514694 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
MATR3-239ENST00000514694 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
MATR3-239ENST00000514694 CUX2O14529 1486 aa27.29■■□□□ 1.96
MATR3-239ENST00000514694 WDR62O43379 1518 aa27.25■■□□□ 1.95
MATR3-239ENST00000514694 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
MATR3-239ENST00000514694 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
MATR3-239ENST00000514694 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
MATR3-239ENST00000514694 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
MATR3-239ENST00000514694 CUX1P39880 1505 aa26.98■■□□□ 1.91
MATR3-239ENST00000514694 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
MATR3-239ENST00000514694 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.896e-9■■■■■ 30.6
MATR3-239ENST00000514694 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
MATR3-239ENST00000514694 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
MATR3-239ENST00000514694 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
MATR3-239ENST00000514694 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
MATR3-239ENST00000514694 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
MATR3-239ENST00000514694 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
MATR3-239ENST00000514694 SOGA1O94964 1423 aa26.74■■□□□ 1.87
MATR3-239ENST00000514694 TOP2BQ02880 1626 aa26.73■■□□□ 1.87
MATR3-239ENST00000514694 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
MATR3-239ENST00000514694 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.854e-10■■■■■ 32.5
MATR3-239ENST00000514694 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
MATR3-239ENST00000514694 TDRD9Q8NDG6 1382 aaKnown RBP26.61■■□□□ 1.85
MATR3-239ENST00000514694 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
MATR3-239ENST00000514694 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
MATR3-239ENST00000514694 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
MATR3-239ENST00000514694 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
MATR3-239ENST00000514694 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
MATR3-239ENST00000514694 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
MATR3-239ENST00000514694 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
MATR3-239ENST00000514694 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
MATR3-239ENST00000514694 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
MATR3-239ENST00000514694 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
MATR3-239ENST00000514694 FBLN2P98095 1184 aa26.23■■□□□ 1.79
MATR3-239ENST00000514694 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
MATR3-239ENST00000514694 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
MATR3-239ENST00000514694 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
MATR3-239ENST00000514694 CHD1O14646 1710 aa26.21■■□□□ 1.79
MATR3-239ENST00000514694 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
MATR3-239ENST00000514694 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
MATR3-239ENST00000514694 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
MATR3-239ENST00000514694 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
MATR3-239ENST00000514694 IGF1RP08069 1367 aa26.16■■□□□ 1.78
MATR3-239ENST00000514694 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
MATR3-239ENST00000514694 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
MATR3-239ENST00000514694 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
MATR3-239ENST00000514694 CARMIL1Q5VZK9 1371 aa25.97■■□□□ 1.75
MATR3-239ENST00000514694 CUL7Q14999 1698 aa25.97■■□□□ 1.75
MATR3-239ENST00000514694 NUP160Q12769 1436 aa25.96■■□□□ 1.75
MATR3-239ENST00000514694 CEP170Q5SW79 1584 aa25.95■■□□□ 1.75
MATR3-239ENST00000514694 FAM9AQ8IZU1 332 aaPredicted RBP25.83■■□□□ 1.73
MATR3-239ENST00000514694 ARHGEF11O15085 1522 aa25.83■■□□□ 1.72
MATR3-239ENST00000514694 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
MATR3-239ENST00000514694 RAPGEF2Q9Y4G8 1499 aa25.82■■□□□ 1.72
MATR3-239ENST00000514694 CSRNP3Q8WYN3 585 aa25.81■■□□□ 1.72
MATR3-239ENST00000514694 EEA1Q15075 1411 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms