RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
NFKB1-211ENST00000513803 MAPKBP1O60336 1514 aa19.77■□□□□ 0.76
NFKB1-211ENST00000513803 KDM6BO15054 1643 aa19.75■□□□□ 0.75
NFKB1-211ENST00000513803 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
NFKB1-211ENST00000513803 DIP2BQ9P265 1576 aa19.73■□□□□ 0.75
NFKB1-211ENST00000513803 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
NFKB1-211ENST00000513803 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
NFKB1-211ENST00000513803 TSPOAP1O95153 1857 aa19.62■□□□□ 0.73
NFKB1-211ENST00000513803 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.73
NFKB1-211ENST00000513803 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
NFKB1-211ENST00000513803 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
NFKB1-211ENST00000513803 KIAA0586Q9BVV6 1533 aa19.54■□□□□ 0.72
NFKB1-211ENST00000513803 PTPRGP23470 1445 aa19.53■□□□□ 0.72
NFKB1-211ENST00000513803 TTBK1Q5TCY1 1321 aaPredicted RBP19.49■□□□□ 0.71
NFKB1-211ENST00000513803 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
NFKB1-211ENST00000513803 PLB1Q6P1J6 1458 aa19.47■□□□□ 0.71
NFKB1-211ENST00000513803 ASXL2Q76L83 1435 aa19.45■□□□□ 0.7
NFKB1-211ENST00000513803 ABCC2Q92887 1545 aa19.45■□□□□ 0.7
NFKB1-211ENST00000513803 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
NFKB1-211ENST00000513803 GLI2P10070 1586 aa19.43■□□□□ 0.7
NFKB1-211ENST00000513803 IGF1RP08069 1367 aa19.42■□□□□ 0.7
NFKB1-211ENST00000513803 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
NFKB1-211ENST00000513803 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
NFKB1-211ENST00000513803 FBXO41Q8TF61 875 aa19.39■□□□□ 0.69
NFKB1-211ENST00000513803 COL17A1Q9UMD9 1497 aaPredicted RBP19.39■□□□□ 0.69
NFKB1-211ENST00000513803 PPRC1Q5VV67 1664 aaKnown RBP19.36■□□□□ 0.69
NFKB1-211ENST00000513803 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
NFKB1-211ENST00000513803 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
NFKB1-211ENST00000513803 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
NFKB1-211ENST00000513803 UACAQ9BZF9 1416 aa19.32■□□□□ 0.68
NFKB1-211ENST00000513803 EPRSP07814 1512 aaKnown RBP19.3■□□□□ 0.68
NFKB1-211ENST00000513803 CUL7Q14999 1698 aa19.28■□□□□ 0.68
NFKB1-211ENST00000513803 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
NFKB1-211ENST00000513803 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
NFKB1-211ENST00000513803 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
NFKB1-211ENST00000513803 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
NFKB1-211ENST00000513803 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
NFKB1-211ENST00000513803 CD109Q6YHK3 1445 aa19.15■□□□□ 0.66
NFKB1-211ENST00000513803 KCNH8Q96L42 1107 aa19.14■□□□□ 0.65
NFKB1-211ENST00000513803 WDR7Q9Y4E6 1490 aa19.14■□□□□ 0.65
NFKB1-211ENST00000513803 ZCCHC11Q5TAX3 1644 aaKnown RBP19.12■□□□□ 0.65
NFKB1-211ENST00000513803 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
NFKB1-211ENST00000513803 UGGT2Q9NYU1 1516 aa19.06■□□□□ 0.64
NFKB1-211ENST00000513803 PTPRMP28827 1452 aa19.03■□□□□ 0.64
NFKB1-211ENST00000513803 CFAP43Q8NDM7 1665 aa19.01■□□□□ 0.63
NFKB1-211ENST00000513803 LMTK3Q96Q04 1460 aa19.01■□□□□ 0.63
NFKB1-211ENST00000513803 KIF21BO75037 1637 aa19■□□□□ 0.63
NFKB1-211ENST00000513803 KIAA0556O60303 1618 aa19■□□□□ 0.63
NFKB1-211ENST00000513803 ARAP3Q8WWN8 1544 aa19■□□□□ 0.63
NFKB1-211ENST00000513803 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
NFKB1-211ENST00000513803 PHLDB1Q86UU1 1377 aa18.97■□□□□ 0.63
NFKB1-211ENST00000513803 FAM9AQ8IZU1 332 aaPredicted RBP18.97■□□□□ 0.63
NFKB1-211ENST00000513803 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
NFKB1-211ENST00000513803 ADAMTSL3P82987 1691 aa18.93■□□□□ 0.62
NFKB1-211ENST00000513803 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
NFKB1-211ENST00000513803 RAPGEF3O95398 923 aa18.92■□□□□ 0.62
NFKB1-211ENST00000513803 PCF11O94913 1555 aaKnown RBP18.91■□□□□ 0.62
NFKB1-211ENST00000513803 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
NFKB1-211ENST00000513803 ABCA8O94911 1581 aa18.88■□□□□ 0.61
NFKB1-211ENST00000513803 SOCS7O14512 581 aa18.86■□□□□ 0.61
NFKB1-211ENST00000513803 HSPA2P54652 639 aa18.85■□□□□ 0.61
NFKB1-211ENST00000513803 ARID3CA6NKF2 412 aa18.84■□□□□ 0.61
NFKB1-211ENST00000513803 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
NFKB1-211ENST00000513803 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
NFKB1-211ENST00000513803 ILDR2Q71H61 639 aa18.81■□□□□ 0.6
NFKB1-211ENST00000513803 NEO1Q92859 1461 aa18.81■□□□□ 0.6
NFKB1-211ENST00000513803 ATP10BO94823 1461 aa18.79■□□□□ 0.6
NFKB1-211ENST00000513803 MADDQ8WXG6 1647 aa18.79■□□□□ 0.6
NFKB1-211ENST00000513803 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
NFKB1-211ENST00000513803 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
NFKB1-211ENST00000513803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
NFKB1-211ENST00000513803 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
NFKB1-211ENST00000513803 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
NFKB1-211ENST00000513803 P3H3Q8IVL6 736 aa18.73■□□□□ 0.59
NFKB1-211ENST00000513803 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
NFKB1-211ENST00000513803 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
NFKB1-211ENST00000513803 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
NFKB1-211ENST00000513803 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
NFKB1-211ENST00000513803 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
NFKB1-211ENST00000513803 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
NFKB1-211ENST00000513803 FANCAO15360 1455 aa18.65■□□□□ 0.58
NFKB1-211ENST00000513803 MLECQ14165 292 aa18.65■□□□□ 0.58
NFKB1-211ENST00000513803 ARHGEF40Q8TER5 1519 aa18.64■□□□□ 0.58
NFKB1-211ENST00000513803 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
NFKB1-211ENST00000513803 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
NFKB1-211ENST00000513803 PRXQ9BXM0 1461 aa18.61■□□□□ 0.57
NFKB1-211ENST00000513803 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
NFKB1-211ENST00000513803 MAGI2Q86UL8 1455 aa18.58■□□□□ 0.56
NFKB1-211ENST00000513803 ZFYVE16Q7Z3T8 1539 aa18.55■□□□□ 0.56
NFKB1-211ENST00000513803 RICTORQ6R327 1708 aa18.55■□□□□ 0.56
NFKB1-211ENST00000513803 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
NFKB1-211ENST00000513803 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
NFKB1-211ENST00000513803 CEBPAP49715 358 aaPredicted RBP18.53■□□□□ 0.56
NFKB1-211ENST00000513803 ZMYM4Q5VZL5 1548 aa18.53■□□□□ 0.56
NFKB1-211ENST00000513803 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.55
NFKB1-211ENST00000513803 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
NFKB1-211ENST00000513803 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
NFKB1-211ENST00000513803 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
NFKB1-211ENST00000513803 FER1L4A9Z1Z3 1794 aa18.49■□□□□ 0.55
NFKB1-211ENST00000513803 ATP10AO60312 1499 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms