RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 NISCHQ9Y2I1 1504 aa27.79■■■□□ 2.04
NFKB1-211ENST00000513803 ABCC9O60706 1549 aa25.82■■□□□ 1.72
NFKB1-211ENST00000513803 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
NFKB1-211ENST00000513803 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
NFKB1-211ENST00000513803 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
NFKB1-211ENST00000513803 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
NFKB1-211ENST00000513803 NACADO15069 1562 aa23.99■■□□□ 1.43
NFKB1-211ENST00000513803 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
NFKB1-211ENST00000513803 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
NFKB1-211ENST00000513803 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
NFKB1-211ENST00000513803 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
NFKB1-211ENST00000513803 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
NFKB1-211ENST00000513803 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
NFKB1-211ENST00000513803 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
NFKB1-211ENST00000513803 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
NFKB1-211ENST00000513803 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
NFKB1-211ENST00000513803 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
NFKB1-211ENST00000513803 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
NFKB1-211ENST00000513803 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
NFKB1-211ENST00000513803 CUX2O14529 1486 aa22.52■■□□□ 1.2
NFKB1-211ENST00000513803 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
NFKB1-211ENST00000513803 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
NFKB1-211ENST00000513803 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
NFKB1-211ENST00000513803 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
NFKB1-211ENST00000513803 NESP48681 1621 aa21.97■■□□□ 1.11
NFKB1-211ENST00000513803 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
NFKB1-211ENST00000513803 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
NFKB1-211ENST00000513803 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
NFKB1-211ENST00000513803 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
NFKB1-211ENST00000513803 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
NFKB1-211ENST00000513803 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
NFKB1-211ENST00000513803 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
NFKB1-211ENST00000513803 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
NFKB1-211ENST00000513803 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
NFKB1-211ENST00000513803 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
NFKB1-211ENST00000513803 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
NFKB1-211ENST00000513803 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
NFKB1-211ENST00000513803 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
NFKB1-211ENST00000513803 WDR62O43379 1518 aa21.42■■□□□ 1.02
NFKB1-211ENST00000513803 MROH2BQ7Z745 1585 aa21.38■■□□□ 1.01
NFKB1-211ENST00000513803 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
NFKB1-211ENST00000513803 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
NFKB1-211ENST00000513803 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
NFKB1-211ENST00000513803 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
NFKB1-211ENST00000513803 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
NFKB1-211ENST00000513803 CFTRP13569 1480 aa21.1■□□□□ 0.97
NFKB1-211ENST00000513803 WIZO95785 1651 aa21.05■□□□□ 0.96
NFKB1-211ENST00000513803 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
NFKB1-211ENST00000513803 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
NFKB1-211ENST00000513803 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
NFKB1-211ENST00000513803 ARHGEF11O15085 1522 aa21.02■□□□□ 0.96
NFKB1-211ENST00000513803 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
NFKB1-211ENST00000513803 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
NFKB1-211ENST00000513803 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
NFKB1-211ENST00000513803 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
NFKB1-211ENST00000513803 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
NFKB1-211ENST00000513803 FBLN2P98095 1184 aa20.77■□□□□ 0.92
NFKB1-211ENST00000513803 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
NFKB1-211ENST00000513803 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
NFKB1-211ENST00000513803 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
NFKB1-211ENST00000513803 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.9
NFKB1-211ENST00000513803 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
NFKB1-211ENST00000513803 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
NFKB1-211ENST00000513803 CHD1O14646 1710 aa20.62■□□□□ 0.89
NFKB1-211ENST00000513803 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
NFKB1-211ENST00000513803 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
NFKB1-211ENST00000513803 TARBP1Q13395 1621 aaKnown RBP20.54■□□□□ 0.88
NFKB1-211ENST00000513803 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
NFKB1-211ENST00000513803 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
NFKB1-211ENST00000513803 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
NFKB1-211ENST00000513803 SOGA1O94964 1423 aa20.44■□□□□ 0.86
NFKB1-211ENST00000513803 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
NFKB1-211ENST00000513803 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
NFKB1-211ENST00000513803 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
NFKB1-211ENST00000513803 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
NFKB1-211ENST00000513803 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
NFKB1-211ENST00000513803 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
NFKB1-211ENST00000513803 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
NFKB1-211ENST00000513803 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
NFKB1-211ENST00000513803 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
NFKB1-211ENST00000513803 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
NFKB1-211ENST00000513803 CUX1P39880 1505 aa20.12■□□□□ 0.81
NFKB1-211ENST00000513803 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
NFKB1-211ENST00000513803 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
NFKB1-211ENST00000513803 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
NFKB1-211ENST00000513803 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
NFKB1-211ENST00000513803 CEP170Q5SW79 1584 aa20■□□□□ 0.79
NFKB1-211ENST00000513803 FAM69CQ0P6D2 419 aa19.98■□□□□ 0.79
NFKB1-211ENST00000513803 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
NFKB1-211ENST00000513803 NUP160Q12769 1436 aa19.98■□□□□ 0.79
NFKB1-211ENST00000513803 NPM1P06748 294 aaKnown RBP eCLIP19.95■□□□□ 0.78
NFKB1-211ENST00000513803 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
NFKB1-211ENST00000513803 KIF13AQ9H1H9 1805 aa19.93■□□□□ 0.78
NFKB1-211ENST00000513803 KDM4FA0A1W2PPD8 638 aa19.93■□□□□ 0.78
NFKB1-211ENST00000513803 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
NFKB1-211ENST00000513803 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
NFKB1-211ENST00000513803 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
NFKB1-211ENST00000513803 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
NFKB1-211ENST00000513803 ABCC10Q5T3U5 1492 aa19.87■□□□□ 0.77
NFKB1-211ENST00000513803 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms