RNA–Protein interactions for RNA: ENST00000513033.1

CLOCK-210, Transcript of clock circadian regulator, humanhuman

TSL 4

Gene CLOCK, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-210ENST00000513033 SHROOM2Q13796 1616 aa30.72■■■□□ 2.51
CLOCK-210ENST00000513033 ERCC6L2Q5T890 1561 aa30.71■■■□□ 2.51
CLOCK-210ENST00000513033 KIAA0586Q9BVV6 1533 aa30.68■■■□□ 2.5
CLOCK-210ENST00000513033 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
CLOCK-210ENST00000513033 RAPGEF2Q9Y4G8 1499 aa30.6■■■□□ 2.49
CLOCK-210ENST00000513033 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
CLOCK-210ENST00000513033 PRXQ9BXM0 1461 aa30.47■■■□□ 2.47
CLOCK-210ENST00000513033 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
CLOCK-210ENST00000513033 IQGAP2Q13576 1575 aa30.39■■■□□ 2.46
CLOCK-210ENST00000513033 TRHP20396 242 aaPredicted RBP30.37■■■□□ 2.45
CLOCK-210ENST00000513033 EEA1Q15075 1411 aa30.37■■■□□ 2.45
CLOCK-210ENST00000513033 CARMIL2Q6F5E8 1435 aa30.33■■■□□ 2.45
CLOCK-210ENST00000513033 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
CLOCK-210ENST00000513033 PTPRGP23470 1445 aa30.29■■■□□ 2.44
CLOCK-210ENST00000513033 TNIKQ9UKE5 1360 aa30.28■■■□□ 2.44
CLOCK-210ENST00000513033 DISP1Q96F81 1524 aa30.27■■■□□ 2.44
CLOCK-210ENST00000513033 UGGT2Q9NYU1 1516 aa30.27■■■□□ 2.44
CLOCK-210ENST00000513033 TTBK1Q5TCY1 1321 aaPredicted RBP30.22■■■□□ 2.43
CLOCK-210ENST00000513033 NPM1P06748 294 aaKnown RBP eCLIP30.17■■■□□ 2.42
CLOCK-210ENST00000513033 CTTNBP2Q8WZ74 1663 aa30.17■■■□□ 2.42
CLOCK-210ENST00000513033 ADCY10Q96PN6 1610 aa30.14■■■□□ 2.41
CLOCK-210ENST00000513033 KIAA0556O60303 1618 aa30.11■■■□□ 2.41
CLOCK-210ENST00000513033 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
CLOCK-210ENST00000513033 UACAQ9BZF9 1416 aa30.05■■■□□ 2.4
CLOCK-210ENST00000513033 UHRF1BP1LA0JNW5 1464 aa30.03■■■□□ 2.4
CLOCK-210ENST00000513033 KIF21BO75037 1637 aa30.01■■■□□ 2.39
CLOCK-210ENST00000513033 MAPKBP1O60336 1514 aa30■■■□□ 2.39
CLOCK-210ENST00000513033 ABCC2Q92887 1545 aa29.99■■■□□ 2.39
CLOCK-210ENST00000513033 P3H3Q8IVL6 736 aa29.97■■■□□ 2.39
CLOCK-210ENST00000513033 ABCC10Q5T3U5 1492 aa29.93■■■□□ 2.38
CLOCK-210ENST00000513033 FAM69CQ0P6D2 419 aa29.93■■■□□ 2.38
CLOCK-210ENST00000513033 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
CLOCK-210ENST00000513033 PLB1Q6P1J6 1458 aa29.9■■■□□ 2.38
CLOCK-210ENST00000513033 RANGAP1P46060 587 aaPredicted RBP29.89■■■□□ 2.38
CLOCK-210ENST00000513033 KDM5BQ9UGL1 1544 aa29.89■■■□□ 2.38
CLOCK-210ENST00000513033 UBTFP17480 764 aaKnown RBP29.88■■■□□ 2.37
CLOCK-210ENST00000513033 SAMD9Q5K651 1589 aa29.86■■■□□ 2.37
CLOCK-210ENST00000513033 KIF13AQ9H1H9 1805 aa29.85■■■□□ 2.37
CLOCK-210ENST00000513033 ABCA8O94911 1581 aa29.84■■■□□ 2.37
CLOCK-210ENST00000513033 ASXL2Q76L83 1435 aa29.83■■■□□ 2.37
CLOCK-210ENST00000513033 DIP2BQ9P265 1576 aa29.8■■■□□ 2.36
CLOCK-210ENST00000513033 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
CLOCK-210ENST00000513033 FHOD3Q2V2M9 1422 aa29.73■■■□□ 2.35
CLOCK-210ENST00000513033 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
CLOCK-210ENST00000513033 ATP10BO94823 1461 aa29.66■■■□□ 2.34
CLOCK-210ENST00000513033 EPRSP07814 1512 aaKnown RBP29.66■■■□□ 2.34
CLOCK-210ENST00000513033 GLI2P10070 1586 aa29.65■■■□□ 2.34
CLOCK-210ENST00000513033 ARID3CA6NKF2 412 aa29.65■■■□□ 2.34
CLOCK-210ENST00000513033 WDR7Q9Y4E6 1490 aa29.61■■■□□ 2.33
CLOCK-210ENST00000513033 RAPGEF6Q8TEU7 1601 aa29.6■■■□□ 2.33
CLOCK-210ENST00000513033 ARHGAP35Q9NRY4 1499 aa29.59■■■□□ 2.33
CLOCK-210ENST00000513033 KCNH8Q96L42 1107 aa29.58■■■□□ 2.33
CLOCK-210ENST00000513033 NUP153P49790 1475 aaKnown RBP29.55■■■□□ 2.32
CLOCK-210ENST00000513033 TSPOAP1O95153 1857 aa29.52■■■□□ 2.32
CLOCK-210ENST00000513033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.51■■■□□ 2.31
CLOCK-210ENST00000513033 HNRNPUL2Q1KMD3 747 aaKnown RBP29.51■■■□□ 2.31
CLOCK-210ENST00000513033 FMN1Q68DA7 1419 aa29.46■■■□□ 2.31
CLOCK-210ENST00000513033 MAP3K4Q9Y6R4 1608 aa29.46■■■□□ 2.31
CLOCK-210ENST00000513033 PPRC1Q5VV67 1664 aaKnown RBP29.45■■■□□ 2.31
CLOCK-210ENST00000513033 CD109Q6YHK3 1445 aa29.42■■■□□ 2.3
CLOCK-210ENST00000513033 PLEKHD1A6NEE1 506 aa29.41■■■□□ 2.3
CLOCK-210ENST00000513033 ATP1B4Q9UN42 357 aaPredicted RBP29.37■■■□□ 2.29
CLOCK-210ENST00000513033 TEX14Q8IWB6 1497 aa29.36■■■□□ 2.29
CLOCK-210ENST00000513033 KDM6BO15054 1643 aa29.35■■■□□ 2.29
CLOCK-210ENST00000513033 CLIP1P30622 1438 aa29.35■■■□□ 2.29
CLOCK-210ENST00000513033 MAGI3Q5TCQ9 1506 aa29.35■■■□□ 2.29
CLOCK-210ENST00000513033 CFAP43Q8NDM7 1665 aa29.33■■■□□ 2.29
CLOCK-210ENST00000513033 COL17A1Q9UMD9 1497 aaPredicted RBP29.32■■■□□ 2.28
CLOCK-210ENST00000513033 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
CLOCK-210ENST00000513033 CDK13Q14004 1512 aaKnown RBP29.3■■■□□ 2.28
CLOCK-210ENST00000513033 ABCA9Q8IUA7 1624 aa29.27■■■□□ 2.28
CLOCK-210ENST00000513033 HECW1Q76N89 1606 aa29.26■■■□□ 2.27
CLOCK-210ENST00000513033 CASKIN1Q8WXD9 1431 aa29.24■■■□□ 2.27
CLOCK-210ENST00000513033 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
CLOCK-210ENST00000513033 CEP162Q5TB80 1403 aa29.16■■■□□ 2.26
CLOCK-210ENST00000513033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.15■■■□□ 2.262e-6■■■■□ 26
CLOCK-210ENST00000513033 PHLDB1Q86UU1 1377 aa29.14■■■□□ 2.26
CLOCK-210ENST00000513033 PCF11O94913 1555 aaKnown RBP29.13■■■□□ 2.25
CLOCK-210ENST00000513033 LRRIQ1Q96JM4 1722 aa29.11■■■□□ 2.25
CLOCK-210ENST00000513033 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
CLOCK-210ENST00000513033 TROQ12816 1431 aaPredicted RBP29.1■■■□□ 2.25
CLOCK-210ENST00000513033 FYCO1Q9BQS8 1478 aa29.1■■■□□ 2.25
CLOCK-210ENST00000513033 NEO1Q92859 1461 aa29.09■■■□□ 2.25
CLOCK-210ENST00000513033 CCDC18Q5T9S5 1454 aa29.08■■■□□ 2.25
CLOCK-210ENST00000513033 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
CLOCK-210ENST00000513033 PLCH2O75038 1416 aa29.03■■■□□ 2.24
CLOCK-210ENST00000513033 RAPGEF3O95398 923 aa29.01■■■□□ 2.23
CLOCK-210ENST00000513033 AKNAQ7Z591 1439 aa29■■■□□ 2.23
CLOCK-210ENST00000513033 FANCAO15360 1455 aa28.99■■■□□ 2.23
CLOCK-210ENST00000513033 KIF14Q15058 1648 aa28.98■■■□□ 2.23
CLOCK-210ENST00000513033 KDM4FA0A1W2PPD8 638 aa28.94■■■□□ 2.22
CLOCK-210ENST00000513033 EFCAB2Q5VUJ9 269 aa28.94■■■□□ 2.22
CLOCK-210ENST00000513033 DENND4BO75064 1496 aaPredicted RBP28.9■■■□□ 2.22
CLOCK-210ENST00000513033 CFAP74Q9C0B2 1584 aa28.88■■■□□ 2.21
CLOCK-210ENST00000513033 SCAPERQ9BY12 1400 aa28.85■■■□□ 2.21
CLOCK-210ENST00000513033 FRMPD1Q5SYB0 1578 aa28.84■■■□□ 2.21
CLOCK-210ENST00000513033 MYO5CQ9NQX4 1742 aa28.84■■■□□ 2.21
CLOCK-210ENST00000513033 VPS8Q8N3P4 1428 aa28.83■■■□□ 2.21
CLOCK-210ENST00000513033 ADGRL1O94910 1474 aa28.83■■■□□ 2.21
CLOCK-210ENST00000513033 MTUS2Q5JR59 1369 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms