RNA–Protein interactions for RNA: ENST00000512883.1

ARHGEF28-211, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2 BASIC

Gene ARHGEF28, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-211ENST00000512883 MAPKBP1O60336 1514 aa22.57■■□□□ 1.2
ARHGEF28-211ENST00000512883 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
ARHGEF28-211ENST00000512883 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
ARHGEF28-211ENST00000512883 CUX2O14529 1486 aa22.51■■□□□ 1.19
ARHGEF28-211ENST00000512883 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
ARHGEF28-211ENST00000512883 NBR1Q14596 966 aa22.48■■□□□ 1.19
ARHGEF28-211ENST00000512883 SETD5Q9C0A6 1442 aa22.45■■□□□ 1.18
ARHGEF28-211ENST00000512883 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.17
ARHGEF28-211ENST00000512883 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
ARHGEF28-211ENST00000512883 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
ARHGEF28-211ENST00000512883 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
ARHGEF28-211ENST00000512883 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.16
ARHGEF28-211ENST00000512883 ANO8Q9HCE9 1232 aaPredicted RBP22.31■■□□□ 1.16
ARHGEF28-211ENST00000512883 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
ARHGEF28-211ENST00000512883 ARHGAP35Q9NRY4 1499 aa22.29■■□□□ 1.16
ARHGEF28-211ENST00000512883 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
ARHGEF28-211ENST00000512883 NOP58Q9Y2X3 529 aaKnown RBP22.28■■□□□ 1.16
ARHGEF28-211ENST00000512883 TONSLQ96HA7 1378 aa22.28■■□□□ 1.16
ARHGEF28-211ENST00000512883 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
ARHGEF28-211ENST00000512883 TIMELESSQ9UNS1 1208 aa22.25■■□□□ 1.15
ARHGEF28-211ENST00000512883 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
ARHGEF28-211ENST00000512883 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
ARHGEF28-211ENST00000512883 FAM9BQ8IZU0 186 aa22.23■■□□□ 1.15
ARHGEF28-211ENST00000512883 CCDC184Q52MB2 194 aa22.22■■□□□ 1.15
ARHGEF28-211ENST00000512883 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
ARHGEF28-211ENST00000512883 RTN4Q9NQC3 1192 aaKnown RBP22.14■■□□□ 1.14
ARHGEF28-211ENST00000512883 SALL2Q9Y467 1007 aaPredicted RBP22.14■■□□□ 1.13
ARHGEF28-211ENST00000512883 RTL5Q5HYW3 569 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF28-211ENST00000512883 ERICH6BQ5W0A0 696 aa22.13■■□□□ 1.13
ARHGEF28-211ENST00000512883 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
ARHGEF28-211ENST00000512883 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
ARHGEF28-211ENST00000512883 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
ARHGEF28-211ENST00000512883 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
ARHGEF28-211ENST00000512883 CCDC136Q96JN2 1154 aa22.09■■□□□ 1.13
ARHGEF28-211ENST00000512883 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.13
ARHGEF28-211ENST00000512883 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.12
ARHGEF28-211ENST00000512883 MRS2Q9HD23 443 aa22.07■■□□□ 1.12
ARHGEF28-211ENST00000512883 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
ARHGEF28-211ENST00000512883 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
ARHGEF28-211ENST00000512883 IL27Q8NEV9 243 aa22.07■■□□□ 1.12
ARHGEF28-211ENST00000512883 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
ARHGEF28-211ENST00000512883 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
ARHGEF28-211ENST00000512883 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
ARHGEF28-211ENST00000512883 IPO9Q96P70 1041 aaKnown RBP22■■□□□ 1.11
ARHGEF28-211ENST00000512883 CUX1P39880 1505 aa21.98■■□□□ 1.11
ARHGEF28-211ENST00000512883 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
ARHGEF28-211ENST00000512883 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF28-211ENST00000512883 PRKRIP1Q9H875 184 aaPredicted RBP21.95■■□□□ 1.1
ARHGEF28-211ENST00000512883 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
ARHGEF28-211ENST00000512883 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
ARHGEF28-211ENST00000512883 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
ARHGEF28-211ENST00000512883 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
ARHGEF28-211ENST00000512883 C11orf95C9JLR9 678 aaPredicted RBP21.92■■□□□ 1.1
ARHGEF28-211ENST00000512883 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
ARHGEF28-211ENST00000512883 LAS1LQ9Y4W2 734 aaKnown RBP21.9■■□□□ 1.1
ARHGEF28-211ENST00000512883 MAP3K1Q13233 1512 aa21.9■■□□□ 1.1
ARHGEF28-211ENST00000512883 IGF1RP08069 1367 aa21.88■■□□□ 1.09
ARHGEF28-211ENST00000512883 CNTLNQ9NXG0 1405 aa21.86■■□□□ 1.09
ARHGEF28-211ENST00000512883 CARMIL1Q5VZK9 1371 aa21.85■■□□□ 1.09
ARHGEF28-211ENST00000512883 UACAQ9BZF9 1416 aa21.85■■□□□ 1.09
ARHGEF28-211ENST00000512883 POLR3GLQ9BT43 218 aa21.84■■□□□ 1.09
ARHGEF28-211ENST00000512883 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
ARHGEF28-211ENST00000512883 RRP7BPQ9NSQ0 103 aa21.83■■□□□ 1.09
ARHGEF28-211ENST00000512883 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
ARHGEF28-211ENST00000512883 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.087e-7■□□□□ 11.1
ARHGEF28-211ENST00000512883 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.08
ARHGEF28-211ENST00000512883 PTPRKQ15262 1439 aa21.82■■□□□ 1.08
ARHGEF28-211ENST00000512883 NEFMP07197 916 aa21.82■■□□□ 1.08
ARHGEF28-211ENST00000512883 FOXD1Q16676 465 aa21.79■■□□□ 1.08
ARHGEF28-211ENST00000512883 FGD6Q6ZV73 1430 aa21.78■■□□□ 1.08
ARHGEF28-211ENST00000512883 CCDC7Q96M83 1385 aa21.77■■□□□ 1.07
ARHGEF28-211ENST00000512883 L3MBTL2Q969R5 705 aa21.76■■□□□ 1.07
ARHGEF28-211ENST00000512883 NUDCQ9Y266 331 aa21.76■■□□□ 1.07
ARHGEF28-211ENST00000512883 KDM5BQ9UGL1 1544 aa21.75■■□□□ 1.07
ARHGEF28-211ENST00000512883 HFM1A2PYH4 1435 aa21.74■■□□□ 1.07
ARHGEF28-211ENST00000512883 MTUS2Q5JR59 1369 aa21.73■■□□□ 1.07
ARHGEF28-211ENST00000512883 NAIPQ13075 1403 aa21.72■■□□□ 1.07
ARHGEF28-211ENST00000512883 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
ARHGEF28-211ENST00000512883 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
ARHGEF28-211ENST00000512883 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.07
ARHGEF28-211ENST00000512883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.061e-8■■□□□ 13.6
ARHGEF28-211ENST00000512883 SMG6Q86US8 1419 aaKnown RBP21.68■■□□□ 1.06
ARHGEF28-211ENST00000512883 KIF7Q2M1P5 1343 aa21.68■■□□□ 1.06
ARHGEF28-211ENST00000512883 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
ARHGEF28-211ENST00000512883 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
ARHGEF28-211ENST00000512883 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
ARHGEF28-211ENST00000512883 BRPF3Q9ULD4 1205 aa21.66■■□□□ 1.06
ARHGEF28-211ENST00000512883 NCOA1Q15788 1441 aa21.65■■□□□ 1.06
ARHGEF28-211ENST00000512883 NBPF8Q3BBV2 869 aa21.65■■□□□ 1.06
ARHGEF28-211ENST00000512883 PDE4AP27815 886 aa21.62■■□□□ 1.05
ARHGEF28-211ENST00000512883 EXOC6Q8TAG9 804 aa21.62■■□□□ 1.05
ARHGEF28-211ENST00000512883 FYCO1Q9BQS8 1478 aa21.61■■□□□ 1.05
ARHGEF28-211ENST00000512883 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
ARHGEF28-211ENST00000512883 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
ARHGEF28-211ENST00000512883 RNF123Q5XPI4 1314 aa21.6■■□□□ 1.05
ARHGEF28-211ENST00000512883 ZNF326Q5BKZ1 582 aaKnown RBP21.58■■□□□ 1.04
ARHGEF28-211ENST00000512883 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
ARHGEF28-211ENST00000512883 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
ARHGEF28-211ENST00000512883 SKAP1Q86WV1 359 aa21.56■■□□□ 1.04
ARHGEF28-211ENST00000512883 TMC1Q8TDI8 760 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms