RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 CTTNBP2Q8WZ74 1663 aa29.05■■■□□ 2.24
NME1-210ENST00000512768 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
NME1-210ENST00000512768 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
NME1-210ENST00000512768 OSCARQ8IYS5 282 aa28.95■■■□□ 2.22
NME1-210ENST00000512768 IQGAP2Q13576 1575 aa28.95■■■□□ 2.22
NME1-210ENST00000512768 CLASP1Q7Z460 1538 aa28.9■■■□□ 2.22
NME1-210ENST00000512768 RANGAP1P46060 587 aaPredicted RBP28.89■■■□□ 2.22
NME1-210ENST00000512768 CEP162Q5TB80 1403 aa28.84■■■□□ 2.21
NME1-210ENST00000512768 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
NME1-210ENST00000512768 UGGT2Q9NYU1 1516 aa28.8■■■□□ 2.2
NME1-210ENST00000512768 CLIP1P30622 1438 aa28.79■■■□□ 2.2
NME1-210ENST00000512768 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
NME1-210ENST00000512768 EFCAB5A4FU69 1503 aa28.72■■■□□ 2.19
NME1-210ENST00000512768 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
NME1-210ENST00000512768 ARHGAP35Q9NRY4 1499 aa28.71■■■□□ 2.19
NME1-210ENST00000512768 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
NME1-210ENST00000512768 DISP1Q96F81 1524 aa28.69■■■□□ 2.18
NME1-210ENST00000512768 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
NME1-210ENST00000512768 CARMIL2Q6F5E8 1435 aa28.67■■■□□ 2.18
NME1-210ENST00000512768 KIAA0556O60303 1618 aa28.66■■■□□ 2.18
NME1-210ENST00000512768 FHOD3Q2V2M9 1422 aa28.61■■■□□ 2.17
NME1-210ENST00000512768 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
NME1-210ENST00000512768 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
NME1-210ENST00000512768 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
NME1-210ENST00000512768 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
NME1-210ENST00000512768 PTPRGP23470 1445 aa28.45■■■□□ 2.15
NME1-210ENST00000512768 FMN1Q68DA7 1419 aa28.45■■■□□ 2.15
NME1-210ENST00000512768 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
NME1-210ENST00000512768 RIMBP3CA6NJZ7 1639 aa28.41■■■□□ 2.14
NME1-210ENST00000512768 RIMBP3BA6NNM3 1639 aa28.41■■■□□ 2.14
NME1-210ENST00000512768 RIMBP3Q9UFD9 1639 aa28.41■■■□□ 2.14
NME1-210ENST00000512768 PCF11O94913 1555 aaKnown RBP28.33■■■□□ 2.13
NME1-210ENST00000512768 CASKIN1Q8WXD9 1431 aa28.32■■■□□ 2.12
NME1-210ENST00000512768 PLB1Q6P1J6 1458 aa28.32■■■□□ 2.12
NME1-210ENST00000512768 RAPGEF6Q8TEU7 1601 aa28.3■■■□□ 2.12
NME1-210ENST00000512768 ABCA8O94911 1581 aa28.3■■■□□ 2.12
NME1-210ENST00000512768 ATP1B4Q9UN42 357 aaPredicted RBP28.29■■■□□ 2.12
NME1-210ENST00000512768 FYCO1Q9BQS8 1478 aa28.28■■■□□ 2.12
NME1-210ENST00000512768 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
NME1-210ENST00000512768 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
NME1-210ENST00000512768 HECW1Q76N89 1606 aa28.24■■■□□ 2.11
NME1-210ENST00000512768 ABCC2Q92887 1545 aa28.21■■■□□ 2.11
NME1-210ENST00000512768 CYB5RLQ6IPT4 315 aa28.2■■■□□ 2.1
NME1-210ENST00000512768 UHRF1BP1LA0JNW5 1464 aa28.2■■■□□ 2.1
NME1-210ENST00000512768 NUP153P49790 1475 aaKnown RBP28.2■■■□□ 2.1
NME1-210ENST00000512768 ARID3CA6NKF2 412 aa28.17■■■□□ 2.1
NME1-210ENST00000512768 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
NME1-210ENST00000512768 LRRIQ1Q96JM4 1722 aa28.15■■■□□ 2.1
NME1-210ENST00000512768 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
NME1-210ENST00000512768 APLP2Q06481 763 aa28.13■■■□□ 2.09
NME1-210ENST00000512768 CCDC18Q5T9S5 1454 aa28.12■■■□□ 2.09
NME1-210ENST00000512768 CDK13Q14004 1512 aaKnown RBP28.11■■■□□ 2.09
NME1-210ENST00000512768 ATP10BO94823 1461 aa28.08■■■□□ 2.09
NME1-210ENST00000512768 TIAM1Q13009 1591 aa28.07■■■□□ 2.08
NME1-210ENST00000512768 CFAP43Q8NDM7 1665 aa28.07■■■□□ 2.08
NME1-210ENST00000512768 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
NME1-210ENST00000512768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
NME1-210ENST00000512768 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
NME1-210ENST00000512768 KDM5BQ9UGL1 1544 aa28.05■■■□□ 2.08
NME1-210ENST00000512768 ZCCHC11Q5TAX3 1644 aaKnown RBP28.03■■■□□ 2.08
NME1-210ENST00000512768 NPM1P06748 294 aaKnown RBP eCLIP28■■■□□ 2.07
NME1-210ENST00000512768 KANK4Q5T7N3 995 aaPredicted RBP27.96■■■□□ 2.07
NME1-210ENST00000512768 CDK11AQ9UQ88 783 aaPredicted RBP27.96■■■□□ 2.07
NME1-210ENST00000512768 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.06
NME1-210ENST00000512768 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
NME1-210ENST00000512768 MAGI3Q5TCQ9 1506 aa27.92■■■□□ 2.06
NME1-210ENST00000512768 MTUS2Q5JR59 1369 aa27.92■■■□□ 2.06
NME1-210ENST00000512768 PLEKHD1A6NEE1 506 aa27.91■■■□□ 2.06
NME1-210ENST00000512768 EHBP1L1Q8N3D4 1523 aa27.88■■■□□ 2.05
NME1-210ENST00000512768 TROQ12816 1431 aaPredicted RBP27.87■■■□□ 2.05
NME1-210ENST00000512768 ASXL2Q76L83 1435 aa27.85■■■□□ 2.05
NME1-210ENST00000512768 WDR7Q9Y4E6 1490 aa27.82■■■□□ 2.04
NME1-210ENST00000512768 MAPKBP1O60336 1514 aa27.81■■■□□ 2.04
NME1-210ENST00000512768 SUPT6HQ7KZ85 1726 aaKnown RBP27.78■■■□□ 2.04
NME1-210ENST00000512768 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
NME1-210ENST00000512768 KIF14Q15058 1648 aa27.76■■■□□ 2.03
NME1-210ENST00000512768 NCOA2Q15596 1464 aa27.74■■■□□ 2.03
NME1-210ENST00000512768 ABCC10Q5T3U5 1492 aa27.66■■■□□ 2.02
NME1-210ENST00000512768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.66■■■□□ 2.021e-6■■■■□ 21.2
NME1-210ENST00000512768 TTC37Q6PGP7 1564 aa27.64■■■□□ 2.01
NME1-210ENST00000512768 PHLDB1Q86UU1 1377 aa27.63■■■□□ 2.01
NME1-210ENST00000512768 CCNB3Q8WWL7 1395 aa27.62■■■□□ 2.01
NME1-210ENST00000512768 ABCA9Q8IUA7 1624 aa27.59■■■□□ 2.01
NME1-210ENST00000512768 DIP2BQ9P265 1576 aa27.59■■■□□ 2.01
NME1-210ENST00000512768 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2
NME1-210ENST00000512768 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
NME1-210ENST00000512768 GLI2P10070 1586 aa27.56■■■□□ 2
NME1-210ENST00000512768 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
NME1-210ENST00000512768 FAM69CQ0P6D2 419 aa27.55■■■□□ 2
NME1-210ENST00000512768 ITSN2Q9NZM3 1697 aa27.55■■■□□ 2
NME1-210ENST00000512768 MYO5CQ9NQX4 1742 aa27.55■■■□□ 2
NME1-210ENST00000512768 PREX2Q70Z35 1606 aa27.52■■■□□ 2
NME1-210ENST00000512768 KIF13AQ9H1H9 1805 aa27.51■■□□□ 1.99
NME1-210ENST00000512768 FGD6Q6ZV73 1430 aa27.5■■□□□ 1.99
NME1-210ENST00000512768 PLCH2O75038 1416 aa27.5■■□□□ 1.99
NME1-210ENST00000512768 CD109Q6YHK3 1445 aa27.5■■□□□ 1.99
NME1-210ENST00000512768 CFDP1Q9UEE9 299 aaPredicted RBP27.49■■□□□ 1.99
NME1-210ENST00000512768 CDC42BPBQ9Y5S2 1711 aa27.49■■□□□ 1.99
NME1-210ENST00000512768 MIA2Q96PC5 1412 aa27.48■■□□□ 1.99
NME1-210ENST00000512768 MAP3K4Q9Y6R4 1608 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms