RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 ERCC6L2Q5T890 1561 aa26.78■■□□□ 1.88
DDX41-214ENST00000512334 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
DDX41-214ENST00000512334 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
DDX41-214ENST00000512334 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
DDX41-214ENST00000512334 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.86
DDX41-214ENST00000512334 IQGAP2Q13576 1575 aa26.62■■□□□ 1.85
DDX41-214ENST00000512334 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
DDX41-214ENST00000512334 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
DDX41-214ENST00000512334 EEA1Q15075 1411 aa26.6■■□□□ 1.85
DDX41-214ENST00000512334 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
DDX41-214ENST00000512334 CTTNBP2Q8WZ74 1663 aa26.51■■□□□ 1.83
DDX41-214ENST00000512334 CARMIL2Q6F5E8 1435 aa26.5■■□□□ 1.83
DDX41-214ENST00000512334 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.83
DDX41-214ENST00000512334 TRHP20396 242 aaPredicted RBP26.44■■□□□ 1.82
DDX41-214ENST00000512334 UGGT2Q9NYU1 1516 aa26.44■■□□□ 1.82
DDX41-214ENST00000512334 PTPRGP23470 1445 aa26.41■■□□□ 1.82
DDX41-214ENST00000512334 DISP1Q96F81 1524 aa26.41■■□□□ 1.82
DDX41-214ENST00000512334 TNIKQ9UKE5 1360 aa26.41■■□□□ 1.82
DDX41-214ENST00000512334 KIAA0556O60303 1618 aa26.36■■□□□ 1.81
DDX41-214ENST00000512334 KIF21BO75037 1637 aa26.33■■□□□ 1.81
DDX41-214ENST00000512334 ADCY10Q96PN6 1610 aa26.32■■□□□ 1.8
DDX41-214ENST00000512334 GOLGA3Q08378 1498 aa26.31■■□□□ 1.8
DDX41-214ENST00000512334 NPM1P06748 294 aaKnown RBP eCLIP26.31■■□□□ 1.8
DDX41-214ENST00000512334 EHMT2Q96KQ7 1210 aa26.29■■□□□ 1.8
DDX41-214ENST00000512334 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
DDX41-214ENST00000512334 UACAQ9BZF9 1416 aa26.22■■□□□ 1.79
DDX41-214ENST00000512334 P3H3Q8IVL6 736 aa26.2■■□□□ 1.78
DDX41-214ENST00000512334 UBTFP17480 764 aaKnown RBP26.19■■□□□ 1.78
DDX41-214ENST00000512334 UHRF1BP1LA0JNW5 1464 aa26.17■■□□□ 1.78
DDX41-214ENST00000512334 ABCC2Q92887 1545 aa26.17■■□□□ 1.78
DDX41-214ENST00000512334 MAPKBP1O60336 1514 aa26.15■■□□□ 1.78
DDX41-214ENST00000512334 SAMD9Q5K651 1589 aa26.14■■□□□ 1.78
DDX41-214ENST00000512334 PLB1Q6P1J6 1458 aa26.12■■□□□ 1.77
DDX41-214ENST00000512334 KIF13AQ9H1H9 1805 aa26.07■■□□□ 1.76
DDX41-214ENST00000512334 ABCA8O94911 1581 aa26.06■■□□□ 1.76
DDX41-214ENST00000512334 ABCC10Q5T3U5 1492 aa26.05■■□□□ 1.76
DDX41-214ENST00000512334 KDM5BQ9UGL1 1544 aa26.05■■□□□ 1.76
DDX41-214ENST00000512334 FAM69CQ0P6D2 419 aa26.05■■□□□ 1.76
DDX41-214ENST00000512334 ZCCHC11Q5TAX3 1644 aaKnown RBP26.03■■□□□ 1.76
DDX41-214ENST00000512334 FHOD3Q2V2M9 1422 aa26.03■■□□□ 1.76
DDX41-214ENST00000512334 ASXL2Q76L83 1435 aa26.03■■□□□ 1.76
DDX41-214ENST00000512334 EFCAB5A4FU69 1503 aa26.03■■□□□ 1.76
DDX41-214ENST00000512334 DIP2BQ9P265 1576 aa26.02■■□□□ 1.76
DDX41-214ENST00000512334 ARID3CA6NKF2 412 aa25.95■■□□□ 1.74
DDX41-214ENST00000512334 RAPGEF6Q8TEU7 1601 aa25.93■■□□□ 1.74
DDX41-214ENST00000512334 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
DDX41-214ENST00000512334 WDR7Q9Y4E6 1490 aa25.87■■□□□ 1.73
DDX41-214ENST00000512334 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
DDX41-214ENST00000512334 ATP10BO94823 1461 aa25.85■■□□□ 1.73
DDX41-214ENST00000512334 EPRSP07814 1512 aaKnown RBP25.85■■□□□ 1.73
DDX41-214ENST00000512334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.84■■□□□ 1.73
DDX41-214ENST00000512334 GLI2P10070 1586 aa25.84■■□□□ 1.73
DDX41-214ENST00000512334 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
DDX41-214ENST00000512334 NUP153P49790 1475 aaKnown RBP25.82■■□□□ 1.72
DDX41-214ENST00000512334 KCNH8Q96L42 1107 aa25.81■■□□□ 1.72
DDX41-214ENST00000512334 FMN1Q68DA7 1419 aa25.8■■□□□ 1.72
DDX41-214ENST00000512334 ATP1B4Q9UN42 357 aaPredicted RBP25.76■■□□□ 1.71
DDX41-214ENST00000512334 MAP3K4Q9Y6R4 1608 aa25.74■■□□□ 1.71
DDX41-214ENST00000512334 CLIP1P30622 1438 aa25.73■■□□□ 1.71
DDX41-214ENST00000512334 PPRC1Q5VV67 1664 aaKnown RBP25.7■■□□□ 1.7
DDX41-214ENST00000512334 HECW1Q76N89 1606 aa25.7■■□□□ 1.7
DDX41-214ENST00000512334 CDK13Q14004 1512 aaKnown RBP25.67■■□□□ 1.7
DDX41-214ENST00000512334 CD109Q6YHK3 1445 aa25.66■■□□□ 1.7
DDX41-214ENST00000512334 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
DDX41-214ENST00000512334 CFAP43Q8NDM7 1665 aa25.66■■□□□ 1.7
DDX41-214ENST00000512334 KDM6BO15054 1643 aa25.65■■□□□ 1.7
DDX41-214ENST00000512334 TEX14Q8IWB6 1497 aa25.65■■□□□ 1.7
DDX41-214ENST00000512334 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.7
DDX41-214ENST00000512334 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
DDX41-214ENST00000512334 PCF11O94913 1555 aaKnown RBP25.6■■□□□ 1.69
DDX41-214ENST00000512334 ABCA9Q8IUA7 1624 aa25.58■■□□□ 1.69
DDX41-214ENST00000512334 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.68
DDX41-214ENST00000512334 CASKIN1Q8WXD9 1431 aa25.57■■□□□ 1.68
DDX41-214ENST00000512334 CDK11AQ9UQ88 783 aaPredicted RBP25.54■■□□□ 1.68
DDX41-214ENST00000512334 LRRIQ1Q96JM4 1722 aa25.53■■□□□ 1.68
DDX41-214ENST00000512334 FYCO1Q9BQS8 1478 aa25.52■■□□□ 1.68
DDX41-214ENST00000512334 CCDC18Q5T9S5 1454 aa25.5■■□□□ 1.67
DDX41-214ENST00000512334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
DDX41-214ENST00000512334 COL17A1Q9UMD9 1497 aaPredicted RBP25.47■■□□□ 1.67
DDX41-214ENST00000512334 TTC37Q6PGP7 1564 aa25.44■■□□□ 1.66
DDX41-214ENST00000512334 TROQ12816 1431 aaPredicted RBP25.44■■□□□ 1.66
DDX41-214ENST00000512334 KIF14Q15058 1648 aa25.41■■□□□ 1.66
DDX41-214ENST00000512334 NEO1Q92859 1461 aa25.38■■□□□ 1.65
DDX41-214ENST00000512334 PHLDB1Q86UU1 1377 aa25.37■■□□□ 1.65
DDX41-214ENST00000512334 ARAP3Q8WWN8 1544 aa25.35■■□□□ 1.65
DDX41-214ENST00000512334 FANCAO15360 1455 aa25.34■■□□□ 1.65
DDX41-214ENST00000512334 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
DDX41-214ENST00000512334 MYO5CQ9NQX4 1742 aa25.32■■□□□ 1.64
DDX41-214ENST00000512334 PLCH2O75038 1416 aa25.31■■□□□ 1.64
DDX41-214ENST00000512334 AKNAQ7Z591 1439 aa25.29■■□□□ 1.64
DDX41-214ENST00000512334 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
DDX41-214ENST00000512334 RAPGEF3O95398 923 aa25.27■■□□□ 1.64
DDX41-214ENST00000512334 MTUS2Q5JR59 1369 aa25.26■■□□□ 1.63
DDX41-214ENST00000512334 ARHGAP5Q13017 1502 aa25.24■■□□□ 1.63
DDX41-214ENST00000512334 EFCAB2Q5VUJ9 269 aa25.24■■□□□ 1.63
DDX41-214ENST00000512334 DENND4BO75064 1496 aaPredicted RBP25.23■■□□□ 1.63
DDX41-214ENST00000512334 ADGRL1O94910 1474 aa25.21■■□□□ 1.63
DDX41-214ENST00000512334 FRMPD1Q5SYB0 1578 aa25.19■■□□□ 1.62
DDX41-214ENST00000512334 CDC42BPBQ9Y5S2 1711 aa25.18■■□□□ 1.62
DDX41-214ENST00000512334 PREX2Q70Z35 1606 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms