RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
CALCOCO2-219ENST00000511697 NUP160Q12769 1436 aa17.57■□□□□ 0.4
CALCOCO2-219ENST00000511697 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
CALCOCO2-219ENST00000511697 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
CALCOCO2-219ENST00000511697 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO2-219ENST00000511697 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
CALCOCO2-219ENST00000511697 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
CALCOCO2-219ENST00000511697 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
CALCOCO2-219ENST00000511697 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
CALCOCO2-219ENST00000511697 CUL7Q14999 1698 aa17.34■□□□□ 0.37
CALCOCO2-219ENST00000511697 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
CALCOCO2-219ENST00000511697 IGF1RP08069 1367 aa17.31■□□□□ 0.36
CALCOCO2-219ENST00000511697 KIAA0586Q9BVV6 1533 aa17.28■□□□□ 0.36
CALCOCO2-219ENST00000511697 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.36
CALCOCO2-219ENST00000511697 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
CALCOCO2-219ENST00000511697 MAPKBP1O60336 1514 aa17.21■□□□□ 0.35
CALCOCO2-219ENST00000511697 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
CALCOCO2-219ENST00000511697 ABCC10Q5T3U5 1492 aa17.2■□□□□ 0.34
CALCOCO2-219ENST00000511697 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
CALCOCO2-219ENST00000511697 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
CALCOCO2-219ENST00000511697 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
CALCOCO2-219ENST00000511697 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
CALCOCO2-219ENST00000511697 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
CALCOCO2-219ENST00000511697 PTPRGP23470 1445 aa17.13■□□□□ 0.33
CALCOCO2-219ENST00000511697 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
CALCOCO2-219ENST00000511697 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
CALCOCO2-219ENST00000511697 KDM6BO15054 1643 aa17.07■□□□□ 0.32
CALCOCO2-219ENST00000511697 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
CALCOCO2-219ENST00000511697 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
CALCOCO2-219ENST00000511697 DISP1Q96F81 1524 aa17.06■□□□□ 0.32
CALCOCO2-219ENST00000511697 ASXL2Q76L83 1435 aa17.02■□□□□ 0.31
CALCOCO2-219ENST00000511697 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
CALCOCO2-219ENST00000511697 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
CALCOCO2-219ENST00000511697 UHRF1BP1LA0JNW5 1464 aa17■□□□□ 0.31
CALCOCO2-219ENST00000511697 KIAA0556O60303 1618 aa17■□□□□ 0.31
CALCOCO2-219ENST00000511697 CTTNBP2Q8WZ74 1663 aa17■□□□□ 0.31
CALCOCO2-219ENST00000511697 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
CALCOCO2-219ENST00000511697 PPRC1Q5VV67 1664 aaKnown RBP16.97■□□□□ 0.31
CALCOCO2-219ENST00000511697 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
CALCOCO2-219ENST00000511697 GLI2P10070 1586 aa16.95■□□□□ 0.3
CALCOCO2-219ENST00000511697 KDM5BQ9UGL1 1544 aa16.94■□□□□ 0.3
CALCOCO2-219ENST00000511697 EPRSP07814 1512 aaKnown RBP16.91■□□□□ 0.3
CALCOCO2-219ENST00000511697 MAP3K4Q9Y6R4 1608 aa16.9■□□□□ 0.3
CALCOCO2-219ENST00000511697 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
CALCOCO2-219ENST00000511697 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
CALCOCO2-219ENST00000511697 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
CALCOCO2-219ENST00000511697 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
CALCOCO2-219ENST00000511697 ABCA8O94911 1581 aa16.83■□□□□ 0.28
CALCOCO2-219ENST00000511697 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
CALCOCO2-219ENST00000511697 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO2-219ENST00000511697 MSH5O43196 834 aa16.82■□□□□ 0.28
CALCOCO2-219ENST00000511697 KCNH8Q96L42 1107 aa16.77■□□□□ 0.28
CALCOCO2-219ENST00000511697 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
CALCOCO2-219ENST00000511697 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
CALCOCO2-219ENST00000511697 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
CALCOCO2-219ENST00000511697 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
CALCOCO2-219ENST00000511697 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
CALCOCO2-219ENST00000511697 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
CALCOCO2-219ENST00000511697 MAGI3Q5TCQ9 1506 aa16.71■□□□□ 0.27
CALCOCO2-219ENST00000511697 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
CALCOCO2-219ENST00000511697 SAMD9Q5K651 1589 aa16.71■□□□□ 0.27
CALCOCO2-219ENST00000511697 KCNA4P22459 653 aa16.68■□□□□ 0.26
CALCOCO2-219ENST00000511697 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
CALCOCO2-219ENST00000511697 ATP10BO94823 1461 aa16.67■□□□□ 0.26
CALCOCO2-219ENST00000511697 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
CALCOCO2-219ENST00000511697 RAPGEF6Q8TEU7 1601 aa16.67■□□□□ 0.26
CALCOCO2-219ENST00000511697 EEA1Q15075 1411 aa16.62■□□□□ 0.25
CALCOCO2-219ENST00000511697 KIF21BO75037 1637 aa16.62■□□□□ 0.25
CALCOCO2-219ENST00000511697 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
CALCOCO2-219ENST00000511697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
CALCOCO2-219ENST00000511697 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
CALCOCO2-219ENST00000511697 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
CALCOCO2-219ENST00000511697 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
CALCOCO2-219ENST00000511697 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
CALCOCO2-219ENST00000511697 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
CALCOCO2-219ENST00000511697 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
CALCOCO2-219ENST00000511697 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
CALCOCO2-219ENST00000511697 NEO1Q92859 1461 aa16.51■□□□□ 0.23
CALCOCO2-219ENST00000511697 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
CALCOCO2-219ENST00000511697 FRMPD1Q5SYB0 1578 aa16.5■□□□□ 0.23
CALCOCO2-219ENST00000511697 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
CALCOCO2-219ENST00000511697 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
CALCOCO2-219ENST00000511697 TTC37Q6PGP7 1564 aa16.46■□□□□ 0.23
CALCOCO2-219ENST00000511697 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
CALCOCO2-219ENST00000511697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
CALCOCO2-219ENST00000511697 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
CALCOCO2-219ENST00000511697 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
CALCOCO2-219ENST00000511697 RICTORQ6R327 1708 aa16.43■□□□□ 0.22
CALCOCO2-219ENST00000511697 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
CALCOCO2-219ENST00000511697 FANCAO15360 1455 aa16.42■□□□□ 0.22
CALCOCO2-219ENST00000511697 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
CALCOCO2-219ENST00000511697 ILDR1Q86SU0 546 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO2-219ENST00000511697 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
CALCOCO2-219ENST00000511697 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO2-219ENST00000511697 DENND4BO75064 1496 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO2-219ENST00000511697 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
CALCOCO2-219ENST00000511697 MADDQ8WXG6 1647 aa16.4■□□□□ 0.22
CALCOCO2-219ENST00000511697 PTPRMP28827 1452 aa16.4■□□□□ 0.22
CALCOCO2-219ENST00000511697 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO2-219ENST00000511697 HECW1Q76N89 1606 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms