RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
SH3RF1-205ENST00000511421 KIAA0586Q9BVV6 1533 aa19.77■□□□□ 0.76
SH3RF1-205ENST00000511421 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
SH3RF1-205ENST00000511421 RAPGEF2Q9Y4G8 1499 aa19.7■□□□□ 0.74
SH3RF1-205ENST00000511421 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
SH3RF1-205ENST00000511421 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
SH3RF1-205ENST00000511421 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
SH3RF1-205ENST00000511421 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
SH3RF1-205ENST00000511421 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
SH3RF1-205ENST00000511421 CARMIL2Q6F5E8 1435 aa19.55■□□□□ 0.72
SH3RF1-205ENST00000511421 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
SH3RF1-205ENST00000511421 TNIKQ9UKE5 1360 aa19.52■□□□□ 0.72
SH3RF1-205ENST00000511421 PTPRGP23470 1445 aa19.52■□□□□ 0.72
SH3RF1-205ENST00000511421 EEA1Q15075 1411 aa19.52■□□□□ 0.72
SH3RF1-205ENST00000511421 DISP1Q96F81 1524 aa19.52■□□□□ 0.72
SH3RF1-205ENST00000511421 ADCY10Q96PN6 1610 aa19.48■□□□□ 0.71
SH3RF1-205ENST00000511421 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
SH3RF1-205ENST00000511421 CTTNBP2Q8WZ74 1663 aa19.45■□□□□ 0.7
SH3RF1-205ENST00000511421 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
SH3RF1-205ENST00000511421 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
SH3RF1-205ENST00000511421 KIAA0556O60303 1618 aa19.43■□□□□ 0.7
SH3RF1-205ENST00000511421 MAPKBP1O60336 1514 aa19.39■□□□□ 0.69
SH3RF1-205ENST00000511421 UACAQ9BZF9 1416 aa19.38■□□□□ 0.69
SH3RF1-205ENST00000511421 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
SH3RF1-205ENST00000511421 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
SH3RF1-205ENST00000511421 ABCC2Q92887 1545 aa19.36■□□□□ 0.69
SH3RF1-205ENST00000511421 ABCC10Q5T3U5 1492 aa19.34■□□□□ 0.69
SH3RF1-205ENST00000511421 KIF21BO75037 1637 aa19.31■□□□□ 0.68
SH3RF1-205ENST00000511421 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
SH3RF1-205ENST00000511421 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
SH3RF1-205ENST00000511421 KDM5BQ9UGL1 1544 aa19.28■□□□□ 0.68
SH3RF1-205ENST00000511421 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
SH3RF1-205ENST00000511421 DIP2BQ9P265 1576 aa19.27■□□□□ 0.68
SH3RF1-205ENST00000511421 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
SH3RF1-205ENST00000511421 ASXL2Q76L83 1435 aa19.26■□□□□ 0.67
SH3RF1-205ENST00000511421 ABCA8O94911 1581 aa19.25■□□□□ 0.67
SH3RF1-205ENST00000511421 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
SH3RF1-205ENST00000511421 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
SH3RF1-205ENST00000511421 ZCCHC11Q5TAX3 1644 aaKnown RBP19.2■□□□□ 0.66
SH3RF1-205ENST00000511421 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
SH3RF1-205ENST00000511421 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
SH3RF1-205ENST00000511421 GLI2P10070 1586 aa19.15■□□□□ 0.66
SH3RF1-205ENST00000511421 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
SH3RF1-205ENST00000511421 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.66
SH3RF1-205ENST00000511421 EFCAB5A4FU69 1503 aa19.12■□□□□ 0.65
SH3RF1-205ENST00000511421 WDR7Q9Y4E6 1490 aa19.12■□□□□ 0.65
SH3RF1-205ENST00000511421 ATP10BO94823 1461 aa19.11■□□□□ 0.65
SH3RF1-205ENST00000511421 ARID3CA6NKF2 412 aa19.09■□□□□ 0.65
SH3RF1-205ENST00000511421 RAPGEF6Q8TEU7 1601 aa19.08■□□□□ 0.65
SH3RF1-205ENST00000511421 TSPOAP1O95153 1857 aa19.08■□□□□ 0.64
SH3RF1-205ENST00000511421 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
SH3RF1-205ENST00000511421 PPRC1Q5VV67 1664 aaKnown RBP19.05■□□□□ 0.64
SH3RF1-205ENST00000511421 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
SH3RF1-205ENST00000511421 ARHGAP35Q9NRY4 1499 aa19.04■□□□□ 0.64
SH3RF1-205ENST00000511421 MAP3K4Q9Y6R4 1608 aa19.04■□□□□ 0.64
SH3RF1-205ENST00000511421 KDM6BO15054 1643 aa18.99■□□□□ 0.63
SH3RF1-205ENST00000511421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
SH3RF1-205ENST00000511421 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
SH3RF1-205ENST00000511421 CD109Q6YHK3 1445 aa18.97■□□□□ 0.63
SH3RF1-205ENST00000511421 TEX14Q8IWB6 1497 aa18.96■□□□□ 0.63
SH3RF1-205ENST00000511421 FMN1Q68DA7 1419 aa18.96■□□□□ 0.63
SH3RF1-205ENST00000511421 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
SH3RF1-205ENST00000511421 COL17A1Q9UMD9 1497 aaPredicted RBP18.94■□□□□ 0.62
SH3RF1-205ENST00000511421 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
SH3RF1-205ENST00000511421 PLEKHD1A6NEE1 506 aa18.92■□□□□ 0.62
SH3RF1-205ENST00000511421 ABCA9Q8IUA7 1624 aa18.89■□□□□ 0.61
SH3RF1-205ENST00000511421 CDK13Q14004 1512 aaKnown RBP18.89■□□□□ 0.61
SH3RF1-205ENST00000511421 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
SH3RF1-205ENST00000511421 HECW1Q76N89 1606 aa18.86■□□□□ 0.61
SH3RF1-205ENST00000511421 CLIP1P30622 1438 aa18.86■□□□□ 0.61
SH3RF1-205ENST00000511421 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
SH3RF1-205ENST00000511421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
SH3RF1-205ENST00000511421 PHLDB1Q86UU1 1377 aa18.79■□□□□ 0.6
SH3RF1-205ENST00000511421 ARAP3Q8WWN8 1544 aa18.79■□□□□ 0.6
SH3RF1-205ENST00000511421 CDK11AQ9UQ88 783 aaPredicted RBP18.79■□□□□ 0.6
SH3RF1-205ENST00000511421 PCF11O94913 1555 aaKnown RBP18.78■□□□□ 0.6
SH3RF1-205ENST00000511421 NEO1Q92859 1461 aa18.77■□□□□ 0.6
SH3RF1-205ENST00000511421 LRRIQ1Q96JM4 1722 aa18.76■□□□□ 0.59
SH3RF1-205ENST00000511421 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
SH3RF1-205ENST00000511421 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
SH3RF1-205ENST00000511421 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
SH3RF1-205ENST00000511421 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
SH3RF1-205ENST00000511421 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
SH3RF1-205ENST00000511421 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
SH3RF1-205ENST00000511421 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
SH3RF1-205ENST00000511421 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
SH3RF1-205ENST00000511421 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
SH3RF1-205ENST00000511421 PLCH2O75038 1416 aa18.7■□□□□ 0.58
SH3RF1-205ENST00000511421 FANCAO15360 1455 aa18.7■□□□□ 0.58
SH3RF1-205ENST00000511421 AKNAQ7Z591 1439 aa18.7■□□□□ 0.58
SH3RF1-205ENST00000511421 KIF14Q15058 1648 aa18.69■□□□□ 0.58
SH3RF1-205ENST00000511421 DENND4BO75064 1496 aaPredicted RBP18.64■□□□□ 0.57
SH3RF1-205ENST00000511421 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.57
SH3RF1-205ENST00000511421 CFAP74Q9C0B2 1584 aa18.64■□□□□ 0.57
SH3RF1-205ENST00000511421 EFCAB2Q5VUJ9 269 aa18.63■□□□□ 0.57
SH3RF1-205ENST00000511421 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
SH3RF1-205ENST00000511421 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
SH3RF1-205ENST00000511421 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
SH3RF1-205ENST00000511421 RICTORQ6R327 1708 aa18.58■□□□□ 0.57
SH3RF1-205ENST00000511421 ARHGAP5Q13017 1502 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms