RNA–Protein interactions for RNA: ENST00000510944.3

FRAS1-206, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-206ENST00000510944 RAB3GAP2Q9H2M9 1393 aa13.47□□□□□ -0.25
FRAS1-206ENST00000510944 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
FRAS1-206ENST00000510944 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
FRAS1-206ENST00000510944 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.26
FRAS1-206ENST00000510944 NEFLP07196 543 aa13.45□□□□□ -0.26
FRAS1-206ENST00000510944 FANCIQ9NVI1 1328 aa13.44□□□□□ -0.26
FRAS1-206ENST00000510944 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
FRAS1-206ENST00000510944 MSH5O43196 834 aa13.42□□□□□ -0.26
FRAS1-206ENST00000510944 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
FRAS1-206ENST00000510944 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
FRAS1-206ENST00000510944 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
FRAS1-206ENST00000510944 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
FRAS1-206ENST00000510944 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
FRAS1-206ENST00000510944 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
FRAS1-206ENST00000510944 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
FRAS1-206ENST00000510944 ANP32CO43423 234 aa13.33□□□□□ -0.28
FRAS1-206ENST00000510944 MYT1LQ9UL68 1186 aa13.33□□□□□ -0.28
FRAS1-206ENST00000510944 CUX1P39880 1505 aa13.32□□□□□ -0.28
FRAS1-206ENST00000510944 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
FRAS1-206ENST00000510944 ITGAEP38570 1179 aa13.31□□□□□ -0.28
FRAS1-206ENST00000510944 ERICH6BQ5W0A0 696 aa13.31□□□□□ -0.28
FRAS1-206ENST00000510944 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
FRAS1-206ENST00000510944 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
FRAS1-206ENST00000510944 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
FRAS1-206ENST00000510944 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
FRAS1-206ENST00000510944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.28
FRAS1-206ENST00000510944 PHLDB1Q86UU1 1377 aa13.28□□□□□ -0.28
FRAS1-206ENST00000510944 CDK11AQ9UQ88 783 aaPredicted RBP13.25□□□□□ -0.29
FRAS1-206ENST00000510944 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.3
FRAS1-206ENST00000510944 KDM5BQ9UGL1 1544 aa13.19□□□□□ -0.3
FRAS1-206ENST00000510944 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
FRAS1-206ENST00000510944 IGF1RP08069 1367 aa13.17□□□□□ -0.3
FRAS1-206ENST00000510944 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
FRAS1-206ENST00000510944 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
FRAS1-206ENST00000510944 CFTRP13569 1480 aa13.16□□□□□ -0.3
FRAS1-206ENST00000510944 PRDM2Q13029 1718 aa13.15□□□□□ -0.3
FRAS1-206ENST00000510944 UACAQ9BZF9 1416 aa13.15□□□□□ -0.3
FRAS1-206ENST00000510944 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
FRAS1-206ENST00000510944 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
FRAS1-206ENST00000510944 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
FRAS1-206ENST00000510944 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
FRAS1-206ENST00000510944 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.31
FRAS1-206ENST00000510944 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
FRAS1-206ENST00000510944 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
FRAS1-206ENST00000510944 EIF5BO60841 1220 aaKnown RBP13.12□□□□□ -0.31
FRAS1-206ENST00000510944 DEKP35659 375 aaKnown RBP13.12□□□□□ -0.31
FRAS1-206ENST00000510944 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
FRAS1-206ENST00000510944 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
FRAS1-206ENST00000510944 CARMIL1Q5VZK9 1371 aa13.1□□□□□ -0.31
FRAS1-206ENST00000510944 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
FRAS1-206ENST00000510944 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
FRAS1-206ENST00000510944 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
FRAS1-206ENST00000510944 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
FRAS1-206ENST00000510944 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.32
FRAS1-206ENST00000510944 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
FRAS1-206ENST00000510944 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
FRAS1-206ENST00000510944 ZBED9Q6R2W3 1325 aa13.05□□□□□ -0.32
FRAS1-206ENST00000510944 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
FRAS1-206ENST00000510944 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
FRAS1-206ENST00000510944 NAIPQ13075 1403 aa13.04□□□□□ -0.32
FRAS1-206ENST00000510944 SENP3Q9H4L4 574 aaPredicted RBP13.03□□□□□ -0.32
FRAS1-206ENST00000510944 POLR1AO95602 1720 aaPredicted RBP13□□□□□ -0.33
FRAS1-206ENST00000510944 HECW1Q76N89 1606 aa13□□□□□ -0.33
FRAS1-206ENST00000510944 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
FRAS1-206ENST00000510944 NCOA1Q15788 1441 aa13□□□□□ -0.33
FRAS1-206ENST00000510944 HSPA5P11021 654 aaKnown RBP13□□□□□ -0.33
FRAS1-206ENST00000510944 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
FRAS1-206ENST00000510944 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
FRAS1-206ENST00000510944 UBE2Q2Q8WVN8 375 aa13□□□□□ -0.33
FRAS1-206ENST00000510944 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
FRAS1-206ENST00000510944 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
FRAS1-206ENST00000510944 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
FRAS1-206ENST00000510944 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
FRAS1-206ENST00000510944 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
FRAS1-206ENST00000510944 FHOD3Q2V2M9 1422 aa12.99□□□□□ -0.33
FRAS1-206ENST00000510944 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
FRAS1-206ENST00000510944 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
FRAS1-206ENST00000510944 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
FRAS1-206ENST00000510944 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
FRAS1-206ENST00000510944 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
FRAS1-206ENST00000510944 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
FRAS1-206ENST00000510944 CCDC7Q96M83 1385 aa12.96□□□□□ -0.34
FRAS1-206ENST00000510944 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
FRAS1-206ENST00000510944 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
FRAS1-206ENST00000510944 LRRIQ1Q96JM4 1722 aa12.95□□□□□ -0.34
FRAS1-206ENST00000510944 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
FRAS1-206ENST00000510944 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
FRAS1-206ENST00000510944 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
FRAS1-206ENST00000510944 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
FRAS1-206ENST00000510944 CUL7Q14999 1698 aa12.93□□□□□ -0.34
FRAS1-206ENST00000510944 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
FRAS1-206ENST00000510944 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
FRAS1-206ENST00000510944 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
FRAS1-206ENST00000510944 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
FRAS1-206ENST00000510944 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
FRAS1-206ENST00000510944 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
FRAS1-206ENST00000510944 EHBP1L1Q8N3D4 1523 aa12.9□□□□□ -0.34
FRAS1-206ENST00000510944 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.34
FRAS1-206ENST00000510944 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
FRAS1-206ENST00000510944 NBR1Q14596 966 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms