RNA–Protein interactions for RNA: ENST00000510944.3

FRAS1-206, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-206ENST00000510944 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
FRAS1-206ENST00000510944 HRCP23327 699 aa16.07■□□□□ 0.16
FRAS1-206ENST00000510944 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
FRAS1-206ENST00000510944 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
FRAS1-206ENST00000510944 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
FRAS1-206ENST00000510944 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
FRAS1-206ENST00000510944 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
FRAS1-206ENST00000510944 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
FRAS1-206ENST00000510944 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
FRAS1-206ENST00000510944 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
FRAS1-206ENST00000510944 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
FRAS1-206ENST00000510944 MYT1Q01538 1121 aa15.59■□□□□ 0.09
FRAS1-206ENST00000510944 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
FRAS1-206ENST00000510944 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
FRAS1-206ENST00000510944 TRIM26Q12899 539 aaPredicted RBP15.3■□□□□ 0.04
FRAS1-206ENST00000510944 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
FRAS1-206ENST00000510944 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
FRAS1-206ENST00000510944 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
FRAS1-206ENST00000510944 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ 0
FRAS1-206ENST00000510944 ABCC9O60706 1549 aa14.93□□□□□ -0.02
FRAS1-206ENST00000510944 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
FRAS1-206ENST00000510944 ACIN1Q9UKV3 1341 aaKnown RBP14.79□□□□□ -0.04
FRAS1-206ENST00000510944 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.05
FRAS1-206ENST00000510944 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
FRAS1-206ENST00000510944 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
FRAS1-206ENST00000510944 NEUROD1Q13562 356 aa14.69□□□□□ -0.06
FRAS1-206ENST00000510944 CENPBP07199 599 aaPredicted RBP14.59□□□□□ -0.07
FRAS1-206ENST00000510944 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
FRAS1-206ENST00000510944 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
FRAS1-206ENST00000510944 FAM9AQ8IZU1 332 aaPredicted RBP14.53□□□□□ -0.08
FRAS1-206ENST00000510944 NACADO15069 1562 aa14.51□□□□□ -0.09
FRAS1-206ENST00000510944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
FRAS1-206ENST00000510944 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
FRAS1-206ENST00000510944 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
FRAS1-206ENST00000510944 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
FRAS1-206ENST00000510944 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
FRAS1-206ENST00000510944 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
FRAS1-206ENST00000510944 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.12
FRAS1-206ENST00000510944 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
FRAS1-206ENST00000510944 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
FRAS1-206ENST00000510944 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
FRAS1-206ENST00000510944 WIZO95785 1651 aa14.29□□□□□ -0.12
FRAS1-206ENST00000510944 CEP162Q5TB80 1403 aa14.24□□□□□ -0.13
FRAS1-206ENST00000510944 TNIKQ9UKE5 1360 aa14.23□□□□□ -0.13
FRAS1-206ENST00000510944 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
FRAS1-206ENST00000510944 EEA1Q15075 1411 aa14.16□□□□□ -0.14
FRAS1-206ENST00000510944 MIER1Q8N108 512 aa14.15□□□□□ -0.14
FRAS1-206ENST00000510944 CCDC88BA6NC98 1476 aa14.15□□□□□ -0.14
FRAS1-206ENST00000510944 CLSPNQ9HAW4 1339 aa14.14□□□□□ -0.15
FRAS1-206ENST00000510944 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
FRAS1-206ENST00000510944 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
FRAS1-206ENST00000510944 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
FRAS1-206ENST00000510944 YTHDC1Q96MU7 727 aaKnown RBP14.09□□□□□ -0.15
FRAS1-206ENST00000510944 SOGA1O94964 1423 aa14.06□□□□□ -0.16
FRAS1-206ENST00000510944 GOLGA3Q08378 1498 aa14.04□□□□□ -0.16
FRAS1-206ENST00000510944 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
FRAS1-206ENST00000510944 APLP2Q06481 763 aa14.03□□□□□ -0.16
FRAS1-206ENST00000510944 UNC13AQ9UPW8 1703 aa14.02□□□□□ -0.16
FRAS1-206ENST00000510944 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
FRAS1-206ENST00000510944 RUSC2Q8N2Y8 1516 aa13.98□□□□□ -0.17
FRAS1-206ENST00000510944 KIF21BO75037 1637 aa13.96□□□□□ -0.17
FRAS1-206ENST00000510944 SUPT16HQ9Y5B9 1047 aaKnown RBP13.96□□□□□ -0.17
FRAS1-206ENST00000510944 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
FRAS1-206ENST00000510944 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
FRAS1-206ENST00000510944 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
FRAS1-206ENST00000510944 UBTFP17480 764 aaKnown RBP13.91□□□□□ -0.18
FRAS1-206ENST00000510944 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
FRAS1-206ENST00000510944 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
FRAS1-206ENST00000510944 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
FRAS1-206ENST00000510944 ANP32EQ9BTT0 268 aa13.88□□□□□ -0.19
FRAS1-206ENST00000510944 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
FRAS1-206ENST00000510944 CLIP1P30622 1438 aa13.88□□□□□ -0.19
FRAS1-206ENST00000510944 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
FRAS1-206ENST00000510944 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
FRAS1-206ENST00000510944 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
FRAS1-206ENST00000510944 BCL11AQ9H165 835 aa13.82□□□□□ -0.2
FRAS1-206ENST00000510944 SYNJ1O43426 1573 aa13.77□□□□□ -0.2
FRAS1-206ENST00000510944 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
FRAS1-206ENST00000510944 CUX2O14529 1486 aa13.76□□□□□ -0.21
FRAS1-206ENST00000510944 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
FRAS1-206ENST00000510944 PEG3Q9GZU2 1588 aa13.74□□□□□ -0.21
FRAS1-206ENST00000510944 RAPGEF2Q9Y4G8 1499 aa13.72□□□□□ -0.21
FRAS1-206ENST00000510944 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
FRAS1-206ENST00000510944 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
FRAS1-206ENST00000510944 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
FRAS1-206ENST00000510944 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
FRAS1-206ENST00000510944 PRXQ9BXM0 1461 aa13.59□□□□□ -0.23
FRAS1-206ENST00000510944 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
FRAS1-206ENST00000510944 MAPKBP1O60336 1514 aa13.57□□□□□ -0.24
FRAS1-206ENST00000510944 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
FRAS1-206ENST00000510944 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
FRAS1-206ENST00000510944 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
FRAS1-206ENST00000510944 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
FRAS1-206ENST00000510944 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
FRAS1-206ENST00000510944 FKBP8Q14318 412 aa13.53□□□□□ -0.24
FRAS1-206ENST00000510944 CCER2I3L3R5 266 aa13.49□□□□□ -0.25
FRAS1-206ENST00000510944 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
FRAS1-206ENST00000510944 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
FRAS1-206ENST00000510944 BCANQ96GW7 911 aa13.48□□□□□ -0.25
FRAS1-206ENST00000510944 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms