RNA–Protein interactions for RNA: ENST00000510106.5

CDK7-207, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-207ENST00000510106 PRXQ9BXM0 1461 aa21.32■■□□□ 1
CDK7-207ENST00000510106 CEP170Q5SW79 1584 aa21.31■■□□□ 1
CDK7-207ENST00000510106 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
CDK7-207ENST00000510106 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
CDK7-207ENST00000510106 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
CDK7-207ENST00000510106 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
CDK7-207ENST00000510106 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
CDK7-207ENST00000510106 CARMIL2Q6F5E8 1435 aa21.22■□□□□ 0.99
CDK7-207ENST00000510106 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
CDK7-207ENST00000510106 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
CDK7-207ENST00000510106 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
CDK7-207ENST00000510106 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
CDK7-207ENST00000510106 PTPRGP23470 1445 aa21.1■□□□□ 0.97
CDK7-207ENST00000510106 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
CDK7-207ENST00000510106 NPM1P06748 294 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDK7-207ENST00000510106 UGGT2Q9NYU1 1516 aa21.09■□□□□ 0.97
CDK7-207ENST00000510106 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
CDK7-207ENST00000510106 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
CDK7-207ENST00000510106 KIF21BO75037 1637 aa20.99■□□□□ 0.95
CDK7-207ENST00000510106 DISP1Q96F81 1524 aa20.99■□□□□ 0.95
CDK7-207ENST00000510106 UACAQ9BZF9 1416 aa20.93■□□□□ 0.94
CDK7-207ENST00000510106 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
CDK7-207ENST00000510106 TRHP20396 242 aaPredicted RBP20.9■□□□□ 0.94
CDK7-207ENST00000510106 CTTNBP2Q8WZ74 1663 aa20.86■□□□□ 0.93
CDK7-207ENST00000510106 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
CDK7-207ENST00000510106 TTBK1Q5TCY1 1321 aaPredicted RBP20.84■□□□□ 0.93
CDK7-207ENST00000510106 ABCC2Q92887 1545 aa20.82■□□□□ 0.92
CDK7-207ENST00000510106 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
CDK7-207ENST00000510106 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
CDK7-207ENST00000510106 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
CDK7-207ENST00000510106 PLB1Q6P1J6 1458 aa20.76■□□□□ 0.91
CDK7-207ENST00000510106 KDM5BQ9UGL1 1544 aa20.76■□□□□ 0.91
CDK7-207ENST00000510106 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
CDK7-207ENST00000510106 RANGAP1P46060 587 aaPredicted RBP20.74■□□□□ 0.91
CDK7-207ENST00000510106 FMN1Q68DA7 1419 aa20.73■□□□□ 0.91
CDK7-207ENST00000510106 ADCY10Q96PN6 1610 aa20.72■□□□□ 0.91
CDK7-207ENST00000510106 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
CDK7-207ENST00000510106 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
CDK7-207ENST00000510106 ABCC10Q5T3U5 1492 aa20.7■□□□□ 0.9
CDK7-207ENST00000510106 ABCA8O94911 1581 aa20.68■□□□□ 0.9
CDK7-207ENST00000510106 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
CDK7-207ENST00000510106 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
CDK7-207ENST00000510106 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
CDK7-207ENST00000510106 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
CDK7-207ENST00000510106 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
CDK7-207ENST00000510106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
CDK7-207ENST00000510106 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
CDK7-207ENST00000510106 ATP10BO94823 1461 aa20.61■□□□□ 0.89
CDK7-207ENST00000510106 CLIP1P30622 1438 aa20.61■□□□□ 0.89
CDK7-207ENST00000510106 WDR7Q9Y4E6 1490 aa20.57■□□□□ 0.88
CDK7-207ENST00000510106 GLI2P10070 1586 aa20.55■□□□□ 0.88
CDK7-207ENST00000510106 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
CDK7-207ENST00000510106 NUP153P49790 1475 aaKnown RBP20.54■□□□□ 0.88
CDK7-207ENST00000510106 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
CDK7-207ENST00000510106 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
CDK7-207ENST00000510106 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
CDK7-207ENST00000510106 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.88
CDK7-207ENST00000510106 CASKIN1Q8WXD9 1431 aa20.5■□□□□ 0.87
CDK7-207ENST00000510106 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
CDK7-207ENST00000510106 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
CDK7-207ENST00000510106 DIP2BQ9P265 1576 aa20.48■□□□□ 0.87
CDK7-207ENST00000510106 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
CDK7-207ENST00000510106 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
CDK7-207ENST00000510106 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
CDK7-207ENST00000510106 TEX14Q8IWB6 1497 aa20.44■□□□□ 0.86
CDK7-207ENST00000510106 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
CDK7-207ENST00000510106 MAGI3Q5TCQ9 1506 aa20.4■□□□□ 0.86
CDK7-207ENST00000510106 FYCO1Q9BQS8 1478 aa20.4■□□□□ 0.86
CDK7-207ENST00000510106 HECW1Q76N89 1606 aa20.39■□□□□ 0.86
CDK7-207ENST00000510106 TROQ12816 1431 aaPredicted RBP20.34■□□□□ 0.85
CDK7-207ENST00000510106 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
CDK7-207ENST00000510106 MAP3K4Q9Y6R4 1608 aa20.29■□□□□ 0.84
CDK7-207ENST00000510106 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
CDK7-207ENST00000510106 VPS8Q8N3P4 1428 aa20.28■□□□□ 0.84
CDK7-207ENST00000510106 NEO1Q92859 1461 aa20.28■□□□□ 0.84
CDK7-207ENST00000510106 CFAP43Q8NDM7 1665 aa20.27■□□□□ 0.84
CDK7-207ENST00000510106 APLP2Q06481 763 aa20.27■□□□□ 0.84
CDK7-207ENST00000510106 ABCA9Q8IUA7 1624 aa20.27■□□□□ 0.83
CDK7-207ENST00000510106 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.83
CDK7-207ENST00000510106 PLCH2O75038 1416 aa20.27■□□□□ 0.83
CDK7-207ENST00000510106 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
CDK7-207ENST00000510106 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
CDK7-207ENST00000510106 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
CDK7-207ENST00000510106 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
CDK7-207ENST00000510106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDK7-207ENST00000510106 AKNAQ7Z591 1439 aa20.17■□□□□ 0.82
CDK7-207ENST00000510106 FANCAO15360 1455 aa20.17■□□□□ 0.82
CDK7-207ENST00000510106 KDM6BO15054 1643 aa20.16■□□□□ 0.82
CDK7-207ENST00000510106 KIF14Q15058 1648 aa20.14■□□□□ 0.81
CDK7-207ENST00000510106 COL17A1Q9UMD9 1497 aaPredicted RBP20.12■□□□□ 0.81
CDK7-207ENST00000510106 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
CDK7-207ENST00000510106 PPRC1Q5VV67 1664 aaKnown RBP20.12■□□□□ 0.81
CDK7-207ENST00000510106 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
CDK7-207ENST00000510106 RSPH4AQ5TD94 716 aa20.11■□□□□ 0.81
CDK7-207ENST00000510106 DENND4BO75064 1496 aaPredicted RBP20.11■□□□□ 0.81
CDK7-207ENST00000510106 TSPOAP1O95153 1857 aa20.09■□□□□ 0.81
CDK7-207ENST00000510106 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.81
CDK7-207ENST00000510106 RAPGEF3O95398 923 aa20.08■□□□□ 0.81
CDK7-207ENST00000510106 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
CDK7-207ENST00000510106 EHBP1L1Q8N3D4 1523 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms