RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 DNAJC5Q9H3Z4 198 aa32.1■■■□□ 2.73
CCND3-212ENST00000510058 GOLGA3Q08378 1498 aa32.06■■■□□ 2.72
CCND3-212ENST00000510058 SHROOM2Q13796 1616 aa32.05■■■□□ 2.72
CCND3-212ENST00000510058 IQGAP2Q13576 1575 aa32.05■■■□□ 2.72
CCND3-212ENST00000510058 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
CCND3-212ENST00000510058 ARHGEF11O15085 1522 aa31.92■■■□□ 2.7
CCND3-212ENST00000510058 UGGT2Q9NYU1 1516 aa31.88■■■□□ 2.69
CCND3-212ENST00000510058 RIMBP3CA6NJZ7 1639 aa31.88■■■□□ 2.69
CCND3-212ENST00000510058 RIMBP3BA6NNM3 1639 aa31.88■■■□□ 2.69
CCND3-212ENST00000510058 RIMBP3Q9UFD9 1639 aa31.88■■■□□ 2.69
CCND3-212ENST00000510058 PRG4Q92954 1404 aaPredicted RBP31.84■■■□□ 2.69
CCND3-212ENST00000510058 UBTFP17480 764 aaKnown RBP31.84■■■□□ 2.69
CCND3-212ENST00000510058 CARMIL2Q6F5E8 1435 aa31.8■■■□□ 2.68
CCND3-212ENST00000510058 ERCC6L2Q5T890 1561 aa31.75■■■□□ 2.67
CCND3-212ENST00000510058 EHMT2Q96KQ7 1210 aa31.74■■■□□ 2.67
CCND3-212ENST00000510058 KIAA0556O60303 1618 aa31.73■■■□□ 2.67
CCND3-212ENST00000510058 DISP1Q96F81 1524 aa31.72■■■□□ 2.67
CCND3-212ENST00000510058 TNIKQ9UKE5 1360 aa31.7■■■□□ 2.67
CCND3-212ENST00000510058 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
CCND3-212ENST00000510058 EFCAB5A4FU69 1503 aa31.68■■■□□ 2.66
CCND3-212ENST00000510058 ARAP1Q96P48 1450 aa31.67■■■□□ 2.66
CCND3-212ENST00000510058 PTPRGP23470 1445 aa31.54■■■□□ 2.64
CCND3-212ENST00000510058 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
CCND3-212ENST00000510058 CYB5RLQ6IPT4 315 aa31.5■■■□□ 2.63
CCND3-212ENST00000510058 RANGAP1P46060 587 aaPredicted RBP31.49■■■□□ 2.63
CCND3-212ENST00000510058 ARHGAP35Q9NRY4 1499 aa31.47■■■□□ 2.63
CCND3-212ENST00000510058 CLIP1P30622 1438 aa31.45■■■□□ 2.63
CCND3-212ENST00000510058 FHOD3Q2V2M9 1422 aa31.41■■■□□ 2.62
CCND3-212ENST00000510058 CEP162Q5TB80 1403 aa31.41■■■□□ 2.62
CCND3-212ENST00000510058 P3H3Q8IVL6 736 aa31.41■■■□□ 2.62
CCND3-212ENST00000510058 UACAQ9BZF9 1416 aa31.37■■■□□ 2.61
CCND3-212ENST00000510058 UHRF1BP1LA0JNW5 1464 aa31.36■■■□□ 2.61
CCND3-212ENST00000510058 FMN1Q68DA7 1419 aa31.34■■■□□ 2.61
CCND3-212ENST00000510058 TTBK1Q5TCY1 1321 aaPredicted RBP31.34■■■□□ 2.61
CCND3-212ENST00000510058 ABCA8O94911 1581 aa31.34■■■□□ 2.61
CCND3-212ENST00000510058 ABCC2Q92887 1545 aa31.34■■■□□ 2.61
CCND3-212ENST00000510058 ADCY10Q96PN6 1610 aa31.33■■■□□ 2.61
CCND3-212ENST00000510058 PLB1Q6P1J6 1458 aa31.28■■■□□ 2.6
CCND3-212ENST00000510058 RAPGEF6Q8TEU7 1601 aa31.28■■■□□ 2.6
CCND3-212ENST00000510058 NPM1P06748 294 aaKnown RBP eCLIP31.19■■■□□ 2.58
CCND3-212ENST00000510058 KDM5BQ9UGL1 1544 aa31.19■■■□□ 2.58
CCND3-212ENST00000510058 HECW1Q76N89 1606 aa31.16■■■□□ 2.58
CCND3-212ENST00000510058 ZCCHC11Q5TAX3 1644 aaKnown RBP31.13■■■□□ 2.57
CCND3-212ENST00000510058 MAPKBP1O60336 1514 aa31.11■■■□□ 2.57
CCND3-212ENST00000510058 NUP153P49790 1475 aaKnown RBP31.11■■■□□ 2.57
CCND3-212ENST00000510058 CASKIN1Q8WXD9 1431 aa31.11■■■□□ 2.57
CCND3-212ENST00000510058 PCF11O94913 1555 aaKnown RBP31.1■■■□□ 2.57
CCND3-212ENST00000510058 FYCO1Q9BQS8 1478 aa31.1■■■□□ 2.57
CCND3-212ENST00000510058 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
CCND3-212ENST00000510058 ATP10BO94823 1461 aa31.02■■■□□ 2.56
CCND3-212ENST00000510058 CCDC18Q5T9S5 1454 aa31■■■□□ 2.55
CCND3-212ENST00000510058 EPRSP07814 1512 aaKnown RBP30.99■■■□□ 2.55
CCND3-212ENST00000510058 ASXL2Q76L83 1435 aa30.96■■■□□ 2.55
CCND3-212ENST00000510058 ATP1B4Q9UN42 357 aaPredicted RBP30.95■■■□□ 2.55
CCND3-212ENST00000510058 LRRIQ1Q96JM4 1722 aa30.95■■■□□ 2.54
CCND3-212ENST00000510058 WDR7Q9Y4E6 1490 aa30.91■■■□□ 2.54
CCND3-212ENST00000510058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.91■■■□□ 2.54
CCND3-212ENST00000510058 HNRNPUL2Q1KMD3 747 aaKnown RBP30.91■■■□□ 2.54
CCND3-212ENST00000510058 CDK13Q14004 1512 aaKnown RBP30.91■■■□□ 2.54
CCND3-212ENST00000510058 ARID3CA6NKF2 412 aa30.88■■■□□ 2.53
CCND3-212ENST00000510058 CDK11AQ9UQ88 783 aaPredicted RBP30.87■■■□□ 2.53
CCND3-212ENST00000510058 ABCC10Q5T3U5 1492 aa30.85■■■□□ 2.53
CCND3-212ENST00000510058 DIP2BQ9P265 1576 aa30.83■■■□□ 2.53
CCND3-212ENST00000510058 PLEKHD1A6NEE1 506 aa30.83■■■□□ 2.53
CCND3-212ENST00000510058 CFAP43Q8NDM7 1665 aa30.81■■■□□ 2.52
CCND3-212ENST00000510058 KIF13AQ9H1H9 1805 aa30.8■■■□□ 2.52
CCND3-212ENST00000510058 GLI2P10070 1586 aa30.79■■■□□ 2.52
CCND3-212ENST00000510058 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
CCND3-212ENST00000510058 TIAM1Q13009 1591 aa30.75■■■□□ 2.51
CCND3-212ENST00000510058 TROQ12816 1431 aaPredicted RBP30.73■■■□□ 2.51
CCND3-212ENST00000510058 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
CCND3-212ENST00000510058 APLP2Q06481 763 aa30.69■■■□□ 2.5
CCND3-212ENST00000510058 FAM69CQ0P6D2 419 aa30.69■■■□□ 2.5
CCND3-212ENST00000510058 KIF14Q15058 1648 aa30.69■■■□□ 2.5
CCND3-212ENST00000510058 EHBP1L1Q8N3D4 1523 aa30.68■■■□□ 2.5
CCND3-212ENST00000510058 ABCA9Q8IUA7 1624 aa30.67■■■□□ 2.5
CCND3-212ENST00000510058 MAP3K4Q9Y6R4 1608 aa30.66■■■□□ 2.5
CCND3-212ENST00000510058 KCNH8Q96L42 1107 aa30.66■■■□□ 2.5
CCND3-212ENST00000510058 MAGI3Q5TCQ9 1506 aa30.66■■■□□ 2.5
CCND3-212ENST00000510058 MTUS2Q5JR59 1369 aa30.65■■■□□ 2.5
CCND3-212ENST00000510058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.6■■■□□ 2.496e-7■■□□□ 11.5
CCND3-212ENST00000510058 LRRC9Q6ZRR7 1453 aa30.59■■■□□ 2.49
CCND3-212ENST00000510058 TTC37Q6PGP7 1564 aa30.55■■■□□ 2.48
CCND3-212ENST00000510058 SUPT6HQ7KZ85 1726 aaKnown RBP30.55■■■□□ 2.48
CCND3-212ENST00000510058 CD109Q6YHK3 1445 aa30.55■■■□□ 2.48
CCND3-212ENST00000510058 MYO5CQ9NQX4 1742 aa30.52■■■□□ 2.48
CCND3-212ENST00000510058 TSPOAP1O95153 1857 aa30.52■■■□□ 2.48
CCND3-212ENST00000510058 TEX14Q8IWB6 1497 aa30.5■■■□□ 2.47
CCND3-212ENST00000510058 PPRC1Q5VV67 1664 aaKnown RBP30.49■■■□□ 2.47
CCND3-212ENST00000510058 ARAP3Q8WWN8 1544 aa30.47■■■□□ 2.47
CCND3-212ENST00000510058 CFAP74Q9C0B2 1584 aa30.44■■■□□ 2.46
CCND3-212ENST00000510058 PLCH2O75038 1416 aa30.43■■■□□ 2.46
CCND3-212ENST00000510058 KANK4Q5T7N3 995 aaPredicted RBP30.43■■■□□ 2.46
CCND3-212ENST00000510058 PREX2Q70Z35 1606 aa30.43■■■□□ 2.46
CCND3-212ENST00000510058 NCOA2Q15596 1464 aa30.42■■■□□ 2.46
CCND3-212ENST00000510058 ITSN2Q9NZM3 1697 aa30.42■■■□□ 2.46
CCND3-212ENST00000510058 CDC42BPAQ5VT25 1732 aa30.42■■■□□ 2.46
CCND3-212ENST00000510058 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
CCND3-212ENST00000510058 PHLDB1Q86UU1 1377 aa30.38■■■□□ 2.45
CCND3-212ENST00000510058 NEO1Q92859 1461 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms