RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 NISCHQ9Y2I1 1504 aa46.57■■■■■ 5.05
CCND3-212ENST00000510058 CCDC180Q9P1Z9 1646 aa41.32■■■■■ 4.2
CCND3-212ENST00000510058 ABCC9O60706 1549 aa39.75■■■■□ 3.95
CCND3-212ENST00000510058 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
CCND3-212ENST00000510058 NACADO15069 1562 aa38.7■■■■□ 3.79
CCND3-212ENST00000510058 MYO15BQ96JP2 1530 aa38.67■■■■□ 3.78
CCND3-212ENST00000510058 DCAF1Q9Y4B6 1507 aa38.66■■■■□ 3.78
CCND3-212ENST00000510058 RB1CC1Q8TDY2 1594 aa38.61■■■■□ 3.77
CCND3-212ENST00000510058 DCAF8L2P0C7V8 631 aa38.55■■■■□ 3.76
CCND3-212ENST00000510058 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
CCND3-212ENST00000510058 SCRIBQ14160 1630 aa37.59■■■■□ 3.61
CCND3-212ENST00000510058 BICRAQ9NZM4 1560 aa37.34■■■■□ 3.57
CCND3-212ENST00000510058 SHROOM4Q9ULL8 1493 aa37.17■■■■□ 3.54
CCND3-212ENST00000510058 PABPN1Q86U42 306 aaKnown RBP eCLIP37.15■■■■□ 3.54
CCND3-212ENST00000510058 EIF4G1Q04637 1599 aaKnown RBP36.35■■■■□ 3.41
CCND3-212ENST00000510058 CECR2Q9BXF3 1484 aa36.12■■■■□ 3.37
CCND3-212ENST00000510058 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
CCND3-212ENST00000510058 SMARCA4P51532 1647 aa36.06■■■■□ 3.36
CCND3-212ENST00000510058 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
CCND3-212ENST00000510058 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
CCND3-212ENST00000510058 MROH2BQ7Z745 1585 aa35.84■■■■□ 3.33
CCND3-212ENST00000510058 SMARCA2P51531 1590 aa35.76■■■■□ 3.32
CCND3-212ENST00000510058 PEG3Q9GZU2 1588 aa35.75■■■■□ 3.31
CCND3-212ENST00000510058 ATAD2BQ9ULI0 1458 aa35.69■■■■□ 3.3
CCND3-212ENST00000510058 NCAPD3P42695 1498 aa35.64■■■■□ 3.3
CCND3-212ENST00000510058 RSF1Q96T23 1441 aaPredicted RBP35.61■■■■□ 3.29
CCND3-212ENST00000510058 HMGXB3Q12766 1538 aa35.57■■■■□ 3.28
CCND3-212ENST00000510058 WIZO95785 1651 aa35.5■■■■□ 3.27
CCND3-212ENST00000510058 BAZ1BQ9UIG0 1483 aaKnown RBP35.46■■■■□ 3.27
CCND3-212ENST00000510058 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
CCND3-212ENST00000510058 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
CCND3-212ENST00000510058 CCDC88BA6NC98 1476 aa34.72■■■■□ 3.15
CCND3-212ENST00000510058 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
CCND3-212ENST00000510058 CADPSQ9ULU8 1353 aa34.6■■■■□ 3.13
CCND3-212ENST00000510058 NESP48681 1621 aa34.52■■■■□ 3.12
CCND3-212ENST00000510058 CFTRP13569 1480 aa34.52■■■■□ 3.12
CCND3-212ENST00000510058 PRDM2Q13029 1718 aa34.43■■■■□ 3.1
CCND3-212ENST00000510058 PDS5BQ9NTI5 1447 aa34.39■■■■□ 3.1
CCND3-212ENST00000510058 ERCC6Q03468 1493 aa34.3■■■■□ 3.08
CCND3-212ENST00000510058 KIF21AQ7Z4S6 1674 aa34.24■■■■□ 3.07
CCND3-212ENST00000510058 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.07
CCND3-212ENST00000510058 CEP164Q9UPV0 1460 aa34.15■■■■□ 3.06
CCND3-212ENST00000510058 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
CCND3-212ENST00000510058 MRC2Q9UBG0 1479 aa34■■■■□ 3.03
CCND3-212ENST00000510058 WDR62O43379 1518 aa33.89■■■■□ 3.02
CCND3-212ENST00000510058 ABCC8Q09428 1581 aa33.85■■■■□ 3.01
CCND3-212ENST00000510058 CUX2O14529 1486 aa33.82■■■■□ 3.01
CCND3-212ENST00000510058 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
CCND3-212ENST00000510058 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
CCND3-212ENST00000510058 TOPBP1Q92547 1522 aa33.71■■■□□ 2.99
CCND3-212ENST00000510058 CUX1P39880 1505 aa33.61■■■□□ 2.97
CCND3-212ENST00000510058 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.979e-6■■■■■ 50.1
CCND3-212ENST00000510058 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
CCND3-212ENST00000510058 TOP2BQ02880 1626 aa33.53■■■□□ 2.96
CCND3-212ENST00000510058 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
CCND3-212ENST00000510058 POLA1P09884 1462 aaPredicted RBP33.45■■■□□ 2.95
CCND3-212ENST00000510058 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
CCND3-212ENST00000510058 IFT140Q96RY7 1462 aa33.43■■■□□ 2.94
CCND3-212ENST00000510058 TARBP1Q13395 1621 aaKnown RBP33.32■■■□□ 2.92
CCND3-212ENST00000510058 SOGA1O94964 1423 aa33.31■■■□□ 2.92
CCND3-212ENST00000510058 WDR97A6NE52 1622 aa33.24■■■□□ 2.91
CCND3-212ENST00000510058 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
CCND3-212ENST00000510058 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
CCND3-212ENST00000510058 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
CCND3-212ENST00000510058 EIF4G3O43432 1585 aaKnown RBP33.11■■■□□ 2.89
CCND3-212ENST00000510058 TRIM41Q8WV44 630 aa33.09■■■□□ 2.89
CCND3-212ENST00000510058 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
CCND3-212ENST00000510058 TDRD9Q8NDG6 1382 aaKnown RBP33■■■□□ 2.87
CCND3-212ENST00000510058 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.877e-7■■■■■ 36
CCND3-212ENST00000510058 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
CCND3-212ENST00000510058 CHIC1Q5VXU3 224 aa32.95■■■□□ 2.87
CCND3-212ENST00000510058 PBRM1Q86U86 1689 aa32.92■■■□□ 2.86
CCND3-212ENST00000510058 GRIN2BQ13224 1484 aa32.91■■■□□ 2.86
CCND3-212ENST00000510058 KIF27Q86VH2 1401 aa32.89■■■□□ 2.86
CCND3-212ENST00000510058 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.85
CCND3-212ENST00000510058 MAGI1Q96QZ7 1491 aaPredicted RBP32.81■■■□□ 2.84
CCND3-212ENST00000510058 SNAPC4Q5SXM2 1469 aa32.76■■■□□ 2.84
CCND3-212ENST00000510058 ADAMTS12P58397 1594 aa32.66■■■□□ 2.82
CCND3-212ENST00000510058 CUL7Q14999 1698 aa32.66■■■□□ 2.82
CCND3-212ENST00000510058 EEA1Q15075 1411 aa32.66■■■□□ 2.82
CCND3-212ENST00000510058 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
CCND3-212ENST00000510058 FHAD1B1AJZ9 1412 aa32.62■■■□□ 2.81
CCND3-212ENST00000510058 IGF1RP08069 1367 aa32.61■■■□□ 2.81
CCND3-212ENST00000510058 CHD1O14646 1710 aa32.61■■■□□ 2.81
CCND3-212ENST00000510058 RUSC2Q8N2Y8 1516 aa32.6■■■□□ 2.81
CCND3-212ENST00000510058 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
CCND3-212ENST00000510058 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
CCND3-212ENST00000510058 FBLN2P98095 1184 aa32.47■■■□□ 2.79
CCND3-212ENST00000510058 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
CCND3-212ENST00000510058 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
CCND3-212ENST00000510058 CSRNP3Q8WYN3 585 aa32.41■■■□□ 2.78
CCND3-212ENST00000510058 RAPGEF2Q9Y4G8 1499 aa32.37■■■□□ 2.77
CCND3-212ENST00000510058 PRXQ9BXM0 1461 aa32.35■■■□□ 2.77
CCND3-212ENST00000510058 NUP160Q12769 1436 aa32.32■■■□□ 2.76
CCND3-212ENST00000510058 CEP170Q5SW79 1584 aa32.28■■■□□ 2.76
CCND3-212ENST00000510058 FAM9AQ8IZU1 332 aaPredicted RBP32.27■■■□□ 2.76
CCND3-212ENST00000510058 CLASP1Q7Z460 1538 aa32.26■■■□□ 2.75
CCND3-212ENST00000510058 KIF21BO75037 1637 aa32.25■■■□□ 2.75
CCND3-212ENST00000510058 KIAA0586Q9BVV6 1533 aa32.14■■■□□ 2.74
CCND3-212ENST00000510058 CTTNBP2Q8WZ74 1663 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms