RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, human

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF28-208	ENST00000509848	RUSC2	Q8N2Y8	1516 aa		34.37	■■■■□ 3.09
ARHGEF28-208	ENST00000509848	CUL7	Q14999	1698 aa		34.29	■■■■□ 3.08
ARHGEF28-208	ENST00000509848	CARMIL1	Q5VZK9	1371 aa		34.28	■■■■□ 3.08
ARHGEF28-208	ENST00000509848	KIAA0586	Q9BVV6	1533 aa		34.25	■■■■□ 3.07
ARHGEF28-208	ENST00000509848	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.05	■■■■□ 3.04
ARHGEF28-208	ENST00000509848	NPM1	P06748	294 aa	Known RBP eCLIP	34.04	■■■■□ 3.04
ARHGEF28-208	ENST00000509848	ADCY10	Q96PN6	1610 aa		33.97	■■■■□ 3.03
ARHGEF28-208	ENST00000509848	PTPRG	P23470	1445 aa		33.96	■■■■□ 3.03
ARHGEF28-208	ENST00000509848	RAPGEF2	Q9Y4G8	1499 aa		33.95	■■■■□ 3.03
ARHGEF28-208	ENST00000509848	IQGAP2	Q13576	1575 aa		33.94	■■■■□ 3.02
ARHGEF28-208	ENST00000509848	CARMIL2	Q6F5E8	1435 aa		33.91	■■■■□ 3.02
ARHGEF28-208	ENST00000509848	FAM69C	Q0P6D2	419 aa		33.9	■■■■□ 3.02
ARHGEF28-208	ENST00000509848	TNIK	Q9UKE5	1360 aa		33.88	■■■■□ 3.01
ARHGEF28-208	ENST00000509848	KIF13A	Q9H1H9	1805 aa		33.88	■■■■□ 3.01
ARHGEF28-208	ENST00000509848	MAPKBP1	O60336	1514 aa		33.84	■■■■□ 3.01
ARHGEF28-208	ENST00000509848	ABCC10	Q5T3U5	1492 aa		33.84	■■■■□ 3.01
ARHGEF28-208	ENST00000509848	DISP1	Q96F81	1524 aa		33.8	■■■■□ 3
ARHGEF28-208	ENST00000509848	UGGT2	Q9NYU1	1516 aa		33.74	■■■□□ 2.99
ARHGEF28-208	ENST00000509848	DIP2B	Q9P265	1576 aa		33.73	■■■□□ 2.99
ARHGEF28-208	ENST00000509848	ABCC2	Q92887	1545 aa		33.69	■■■□□ 2.98
ARHGEF28-208	ENST00000509848	UACA	Q9BZF9	1416 aa		33.67	■■■□□ 2.98
ARHGEF28-208	ENST00000509848	PRX	Q9BXM0	1461 aa		33.66	■■■□□ 2.98
ARHGEF28-208	ENST00000509848	UHRF1BP1L	A0JNW5	1464 aa		33.63	■■■□□ 2.97
ARHGEF28-208	ENST00000509848	KIAA0556	O60303	1618 aa		33.62	■■■□□ 2.97
ARHGEF28-208	ENST00000509848	ASXL2	Q76L83	1435 aa		33.6	■■■□□ 2.97
ARHGEF28-208	ENST00000509848	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.57	■■■□□ 2.96
ARHGEF28-208	ENST00000509848	CTTNBP2	Q8WZ74	1663 aa		33.56	■■■□□ 2.96
ARHGEF28-208	ENST00000509848	CSRNP3	Q8WYN3	585 aa		33.53	■■■□□ 2.96
ARHGEF28-208	ENST00000509848	PLB1	Q6P1J6	1458 aa		33.52	■■■□□ 2.96
ARHGEF28-208	ENST00000509848	TSPOAP1	O95153	1857 aa		33.5	■■■□□ 2.95
ARHGEF28-208	ENST00000509848	KDM5B	Q9UGL1	1544 aa		33.48	■■■□□ 2.95
ARHGEF28-208	ENST00000509848	GOLGA3	Q08378	1498 aa		33.47	■■■□□ 2.95
ARHGEF28-208	ENST00000509848	P3H3	Q8IVL6	736 aa		33.42	■■■□□ 2.94
ARHGEF28-208	ENST00000509848	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.42	■■■□□ 2.94
ARHGEF28-208	ENST00000509848	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.41	■■■□□ 2.94
ARHGEF28-208	ENST00000509848	KDM6B	O15054	1643 aa		33.39	■■■□□ 2.94
ARHGEF28-208	ENST00000509848	GLI2	P10070	1586 aa		33.38	■■■□□ 2.93
ARHGEF28-208	ENST00000509848	EPRS	P07814	1512 aa	Known RBP	33.37	■■■□□ 2.93
ARHGEF28-208	ENST00000509848	ABCA8	O94911	1581 aa		33.32	■■■□□ 2.92
ARHGEF28-208	ENST00000509848	EEA1	Q15075	1411 aa		33.3	■■■□□ 2.92
ARHGEF28-208	ENST00000509848	RANGAP1	P46060	587 aa	Predicted RBP	33.28	■■■□□ 2.92
ARHGEF28-208	ENST00000509848	PPRC1	Q5VV67	1664 aa	Known RBP	33.28	■■■□□ 2.92
ARHGEF28-208	ENST00000509848	ARID3C	A6NKF2	412 aa		33.27	■■■□□ 2.92
ARHGEF28-208	ENST00000509848	WDR7	Q9Y4E6	1490 aa		33.26	■■■□□ 2.92
ARHGEF28-208	ENST00000509848	KCNH8	Q96L42	1107 aa		33.25	■■■□□ 2.91
ARHGEF28-208	ENST00000509848	MAP3K4	Q9Y6R4	1608 aa		33.2	■■■□□ 2.91
ARHGEF28-208	ENST00000509848	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.16	■■■□□ 2.9
ARHGEF28-208	ENST00000509848	CHIC1	Q5VXU3	224 aa		33.15	■■■□□ 2.9
ARHGEF28-208	ENST00000509848	SAMD9	Q5K651	1589 aa		33.14	■■■□□ 2.9
ARHGEF28-208	ENST00000509848	EHMT2	Q96KQ7	1210 aa		33.12	■■■□□ 2.89
ARHGEF28-208	ENST00000509848	TEX14	Q8IWB6	1497 aa		33.12	■■■□□ 2.89
ARHGEF28-208	ENST00000509848	ATP10B	O94823	1461 aa		33.11	■■■□□ 2.89
ARHGEF28-208	ENST00000509848	KDM4F	A0A1W2PPD8	638 aa		33.09	■■■□□ 2.89
ARHGEF28-208	ENST00000509848	CD109	Q6YHK3	1445 aa		33.08	■■■□□ 2.89
ARHGEF28-208	ENST00000509848	FHOD3	Q2V2M9	1422 aa		33.05	■■■□□ 2.88
ARHGEF28-208	ENST00000509848	KIF21B	O75037	1637 aa		33.02	■■■□□ 2.88
ARHGEF28-208	ENST00000509848	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.01	■■■□□ 2.87
ARHGEF28-208	ENST00000509848	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.01	■■■□□ 2.87
ARHGEF28-208	ENST00000509848	RAPGEF6	Q8TEU7	1601 aa		32.99	■■■□□ 2.87
ARHGEF28-208	ENST00000509848	MAGI3	Q5TCQ9	1506 aa		32.98	■■■□□ 2.87
ARHGEF28-208	ENST00000509848	CFAP43	Q8NDM7	1665 aa		32.97	■■■□□ 2.87
ARHGEF28-208	ENST00000509848	UBTF	P17480	764 aa	Known RBP	32.94	■■■□□ 2.86
ARHGEF28-208	ENST00000509848	NUP153	P49790	1475 aa	Known RBP	32.93	■■■□□ 2.86
ARHGEF28-208	ENST00000509848	EFCAB5	A4FU69	1503 aa		32.84	■■■□□ 2.85
ARHGEF28-208	ENST00000509848	ADGRL1	O94910	1474 aa		32.8	■■■□□ 2.84
ARHGEF28-208	ENST00000509848	ABCA9	Q8IUA7	1624 aa		32.79	■■■□□ 2.84
ARHGEF28-208	ENST00000509848	PLEKHD1	A6NEE1	506 aa		32.77	■■■□□ 2.84
ARHGEF28-208	ENST00000509848	ARAP3	Q8WWN8	1544 aa		32.72	■■■□□ 2.83
ARHGEF28-208	ENST00000509848	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.71	■■■□□ 2.83
ARHGEF28-208	ENST00000509848	ARHGAP35	Q9NRY4	1499 aa		32.68	■■■□□ 2.82
ARHGEF28-208	ENST00000509848	RAPGEF3	O95398	923 aa		32.67	■■■□□ 2.82
ARHGEF28-208	ENST00000509848	CDK13	Q14004	1512 aa	Known RBP	32.66	■■■□□ 2.82
ARHGEF28-208	ENST00000509848	PHLDB1	Q86UU1	1377 aa		32.65	■■■□□ 2.82
ARHGEF28-208	ENST00000509848	NEO1	Q92859	1461 aa		32.62	■■■□□ 2.81
ARHGEF28-208	ENST00000509848	FMN1	Q68DA7	1419 aa		32.6	■■■□□ 2.81
ARHGEF28-208	ENST00000509848	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.57	■■■□□ 2.8
ARHGEF28-208	ENST00000509848	TTC37	Q6PGP7	1564 aa		32.51	■■■□□ 2.79
ARHGEF28-208	ENST00000509848	HECW1	Q76N89	1606 aa		32.49	■■■□□ 2.79
ARHGEF28-208	ENST00000509848	AKNA	Q7Z591	1439 aa		32.49	■■■□□ 2.79
ARHGEF28-208	ENST00000509848	FANCA	O15360	1455 aa		32.48	■■■□□ 2.79
ARHGEF28-208	ENST00000509848	FRMPD1	Q5SYB0	1578 aa		32.47	■■■□□ 2.79
ARHGEF28-208	ENST00000509848	DENND4B	O75064	1496 aa	Predicted RBP	32.44	■■■□□ 2.78
ARHGEF28-208	ENST00000509848	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.43	■■■□□ 2.78
ARHGEF28-208	ENST00000509848	PLCH2	O75038	1416 aa		32.38	■■■□□ 2.77
ARHGEF28-208	ENST00000509848	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.37	■■■□□ 2.77
ARHGEF28-208	ENST00000509848	CFAP74	Q9C0B2	1584 aa		32.36	■■■□□ 2.77
ARHGEF28-208	ENST00000509848	TRO	Q12816	1431 aa	Predicted RBP	32.33	■■■□□ 2.77
ARHGEF28-208	ENST00000509848	RICTOR	Q6R327	1708 aa		32.32	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	KIF14	Q15058	1648 aa		32.32	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	LRRIQ1	Q96JM4	1722 aa		32.31	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	SCAPER	Q9BY12	1400 aa		32.3	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	CASKIN1	Q8WXD9	1431 aa		32.29	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	EFCAB2	Q5VUJ9	269 aa		32.29	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	PCF11	O94913	1555 aa	Known RBP	32.28	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	CLIP1	P30622	1438 aa		32.26	■■■□□ 2.76
ARHGEF28-208	ENST00000509848	HECW2	Q9P2P5	1572 aa		32.26	■■■□□ 2.75
ARHGEF28-208	ENST00000509848	ARHGEF40	Q8TER5	1519 aa		32.26	■■■□□ 2.75
ARHGEF28-208	ENST00000509848	YEATS2	Q9ULM3	1422 aa		32.25	■■■□□ 2.75
ARHGEF28-208	ENST00000509848	ADAMTSL3	P82987	1691 aa		32.24	■■■□□ 2.75
ARHGEF28-208	ENST00000509848	MYO5C	Q9NQX4	1742 aa		32.21	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms