RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 TRHP20396 242 aaPredicted RBP36.62■■■■□ 3.45
LIN54-208ENST00000509748 PRG4Q92954 1404 aaPredicted RBP36.61■■■■□ 3.45
LIN54-208ENST00000509748 CARMIL1Q5VZK9 1371 aa36.56■■■■□ 3.44
LIN54-208ENST00000509748 KIAA0586Q9BVV6 1533 aa36.53■■■■□ 3.44
LIN54-208ENST00000509748 RAPGEF2Q9Y4G8 1499 aa36.26■■■■□ 3.4
LIN54-208ENST00000509748 IQGAP2Q13576 1575 aa36.2■■■■□ 3.39
LIN54-208ENST00000509748 ADCY10Q96PN6 1610 aa36.15■■■■□ 3.38
LIN54-208ENST00000509748 PTPRGP23470 1445 aa36.09■■■■□ 3.37
LIN54-208ENST00000509748 CARMIL2Q6F5E8 1435 aa36.09■■■■□ 3.37
LIN54-208ENST00000509748 TNIKQ9UKE5 1360 aa36.07■■■■□ 3.36
LIN54-208ENST00000509748 DISP1Q96F81 1524 aa36.06■■■■□ 3.36
LIN54-208ENST00000509748 PRXQ9BXM0 1461 aa36.05■■■■□ 3.36
LIN54-208ENST00000509748 UGGT2Q9NYU1 1516 aa36.03■■■■□ 3.36
LIN54-208ENST00000509748 NPM1P06748 294 aaKnown RBP eCLIP36.03■■■■□ 3.36
LIN54-208ENST00000509748 KIF13AQ9H1H9 1805 aa36.02■■■■□ 3.36
LIN54-208ENST00000509748 MAPKBP1O60336 1514 aa36■■■■□ 3.35
LIN54-208ENST00000509748 TTBK1Q5TCY1 1321 aaPredicted RBP35.97■■■■□ 3.35
LIN54-208ENST00000509748 ABCC10Q5T3U5 1492 aa35.93■■■■□ 3.34
LIN54-208ENST00000509748 CTTNBP2Q8WZ74 1663 aa35.91■■■■□ 3.34
LIN54-208ENST00000509748 KIAA0556O60303 1618 aa35.88■■■■□ 3.33
LIN54-208ENST00000509748 FAM69CQ0P6D2 419 aa35.87■■■■□ 3.33
LIN54-208ENST00000509748 CSRNP3Q8WYN3 585 aa35.86■■■■□ 3.33
LIN54-208ENST00000509748 UHRF1BP1LA0JNW5 1464 aa35.86■■■■□ 3.33
LIN54-208ENST00000509748 ABCC2Q92887 1545 aa35.85■■■■□ 3.33
LIN54-208ENST00000509748 DIP2BQ9P265 1576 aa35.84■■■■□ 3.33
LIN54-208ENST00000509748 UACAQ9BZF9 1416 aa35.83■■■■□ 3.33
LIN54-208ENST00000509748 EEA1Q15075 1411 aa35.74■■■■□ 3.31
LIN54-208ENST00000509748 GOLGA3Q08378 1498 aa35.72■■■■□ 3.31
LIN54-208ENST00000509748 KDM5BQ9UGL1 1544 aa35.69■■■■□ 3.3
LIN54-208ENST00000509748 ASXL2Q76L83 1435 aa35.68■■■■□ 3.3
LIN54-208ENST00000509748 PLB1Q6P1J6 1458 aa35.65■■■■□ 3.3
LIN54-208ENST00000509748 CHIC1Q5VXU3 224 aa35.61■■■■□ 3.29
LIN54-208ENST00000509748 FAM9AQ8IZU1 332 aaPredicted RBP35.59■■■■□ 3.29
LIN54-208ENST00000509748 ZCCHC11Q5TAX3 1644 aaKnown RBP35.58■■■■□ 3.29
LIN54-208ENST00000509748 ABCA8O94911 1581 aa35.56■■■■□ 3.28
LIN54-208ENST00000509748 TSPOAP1O95153 1857 aa35.55■■■■□ 3.28
LIN54-208ENST00000509748 GLI2P10070 1586 aa35.55■■■■□ 3.28
LIN54-208ENST00000509748 P3H3Q8IVL6 736 aa35.49■■■■□ 3.27
LIN54-208ENST00000509748 EPRSP07814 1512 aaKnown RBP35.48■■■■□ 3.27
LIN54-208ENST00000509748 SAMD9Q5K651 1589 aa35.47■■■■□ 3.27
LIN54-208ENST00000509748 PPRC1Q5VV67 1664 aaKnown RBP35.43■■■■□ 3.26
LIN54-208ENST00000509748 KIF21BO75037 1637 aa35.43■■■■□ 3.26
LIN54-208ENST00000509748 WDR7Q9Y4E6 1490 aa35.39■■■■□ 3.26
LIN54-208ENST00000509748 KDM6BO15054 1643 aa35.38■■■■□ 3.25
LIN54-208ENST00000509748 MAP3K4Q9Y6R4 1608 aa35.35■■■■□ 3.25
LIN54-208ENST00000509748 RANGAP1P46060 587 aaPredicted RBP35.29■■■■□ 3.24
LIN54-208ENST00000509748 ATP10BO94823 1461 aa35.29■■■■□ 3.24
LIN54-208ENST00000509748 FHOD3Q2V2M9 1422 aa35.23■■■■□ 3.23
LIN54-208ENST00000509748 ARID3CA6NKF2 412 aa35.23■■■■□ 3.23
LIN54-208ENST00000509748 RAPGEF6Q8TEU7 1601 aa35.22■■■■□ 3.23
LIN54-208ENST00000509748 KCNH8Q96L42 1107 aa35.22■■■■□ 3.23
LIN54-208ENST00000509748 COL17A1Q9UMD9 1497 aaPredicted RBP35.2■■■■□ 3.23
LIN54-208ENST00000509748 TEX14Q8IWB6 1497 aa35.17■■■■□ 3.22
LIN54-208ENST00000509748 AEBP2Q6ZN18 517 aaPredicted RBP35.16■■■■□ 3.22
LIN54-208ENST00000509748 EFCAB5A4FU69 1503 aa35.16■■■■□ 3.22
LIN54-208ENST00000509748 EHMT2Q96KQ7 1210 aa35.15■■■■□ 3.22
LIN54-208ENST00000509748 NUP153P49790 1475 aaKnown RBP35.14■■■■□ 3.22
LIN54-208ENST00000509748 CFAP43Q8NDM7 1665 aa35.14■■■■□ 3.22
LIN54-208ENST00000509748 CD109Q6YHK3 1445 aa35.14■■■■□ 3.22
LIN54-208ENST00000509748 UBTFP17480 764 aaKnown RBP35.13■■■■□ 3.21
LIN54-208ENST00000509748 MAGI3Q5TCQ9 1506 aa35.11■■■■□ 3.21
LIN54-208ENST00000509748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.99■■■■□ 3.19
LIN54-208ENST00000509748 HNRNPUL2Q1KMD3 747 aaKnown RBP34.99■■■■□ 3.19
LIN54-208ENST00000509748 ABCA9Q8IUA7 1624 aa34.98■■■■□ 3.19
LIN54-208ENST00000509748 ARHGAP35Q9NRY4 1499 aa34.97■■■■□ 3.19
LIN54-208ENST00000509748 KDM4FA0A1W2PPD8 638 aa34.94■■■■□ 3.18
LIN54-208ENST00000509748 PLEKHD1A6NEE1 506 aa34.87■■■■□ 3.17
LIN54-208ENST00000509748 FMN1Q68DA7 1419 aa34.84■■■■□ 3.17
LIN54-208ENST00000509748 ARAP3Q8WWN8 1544 aa34.84■■■■□ 3.17
LIN54-208ENST00000509748 CDK13Q14004 1512 aaKnown RBP34.81■■■■□ 3.16
LIN54-208ENST00000509748 PHLDB1Q86UU1 1377 aa34.78■■■■□ 3.16
LIN54-208ENST00000509748 NEO1Q92859 1461 aa34.74■■■■□ 3.15
LIN54-208ENST00000509748 HECW1Q76N89 1606 aa34.73■■■■□ 3.15
LIN54-208ENST00000509748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.72■■■■□ 3.156e-13■■■■□ 25
LIN54-208ENST00000509748 ATP1B4Q9UN42 357 aaPredicted RBP34.7■■■■□ 3.15
LIN54-208ENST00000509748 ADGRL1O94910 1474 aa34.7■■■■□ 3.15
LIN54-208ENST00000509748 TTC37Q6PGP7 1564 aa34.66■■■■□ 3.14
LIN54-208ENST00000509748 RAPGEF3O95398 923 aa34.64■■■■□ 3.14
LIN54-208ENST00000509748 LRRIQ1Q96JM4 1722 aa34.61■■■■□ 3.13
LIN54-208ENST00000509748 FRMPD1Q5SYB0 1578 aa34.58■■■■□ 3.13
LIN54-208ENST00000509748 FANCAO15360 1455 aa34.57■■■■□ 3.12
LIN54-208ENST00000509748 AKNAQ7Z591 1439 aa34.56■■■■□ 3.12
LIN54-208ENST00000509748 CDK11AQ9UQ88 783 aaPredicted RBP34.56■■■■□ 3.12
LIN54-208ENST00000509748 CASKIN1Q8WXD9 1431 aa34.55■■■■□ 3.12
LIN54-208ENST00000509748 CLIP1P30622 1438 aa34.53■■■■□ 3.12
LIN54-208ENST00000509748 PLCH2O75038 1416 aa34.52■■■■□ 3.12
LIN54-208ENST00000509748 PCF11O94913 1555 aaKnown RBP34.52■■■■□ 3.12
LIN54-208ENST00000509748 TROQ12816 1431 aaPredicted RBP34.51■■■■□ 3.12
LIN54-208ENST00000509748 CFAP74Q9C0B2 1584 aa34.5■■■■□ 3.11
LIN54-208ENST00000509748 KIF14Q15058 1648 aa34.49■■■■□ 3.11
LIN54-208ENST00000509748 DENND4BO75064 1496 aaPredicted RBP34.49■■■■□ 3.11
LIN54-208ENST00000509748 RICTORQ6R327 1708 aa34.47■■■■□ 3.11
LIN54-208ENST00000509748 CCDC18Q5T9S5 1454 aa34.42■■■■□ 3.1
LIN54-208ENST00000509748 FYCO1Q9BQS8 1478 aa34.4■■■■□ 3.1
LIN54-208ENST00000509748 MYO5CQ9NQX4 1742 aa34.4■■■■□ 3.1
LIN54-208ENST00000509748 EFCAB2Q5VUJ9 269 aa34.36■■■■□ 3.09
LIN54-208ENST00000509748 SCAPERQ9BY12 1400 aa34.35■■■■□ 3.09
LIN54-208ENST00000509748 ZMYM4Q5VZL5 1548 aa34.34■■■■□ 3.09
LIN54-208ENST00000509748 ARHGEF40Q8TER5 1519 aa34.32■■■■□ 3.08
LIN54-208ENST00000509748 POGZQ7Z3K3 1410 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms