RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
SSBP2-212ENST00000509053 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
SSBP2-212ENST00000509053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
SSBP2-212ENST00000509053 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
SSBP2-212ENST00000509053 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
SSBP2-212ENST00000509053 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
SSBP2-212ENST00000509053 SOGA1O94964 1423 aa13.79□□□□□ -0.2
SSBP2-212ENST00000509053 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
SSBP2-212ENST00000509053 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
SSBP2-212ENST00000509053 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
SSBP2-212ENST00000509053 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
SSBP2-212ENST00000509053 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
SSBP2-212ENST00000509053 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
SSBP2-212ENST00000509053 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
SSBP2-212ENST00000509053 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SSBP2-212ENST00000509053 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
SSBP2-212ENST00000509053 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
SSBP2-212ENST00000509053 ABCA5Q8WWZ7 1642 aa13.7□□□□□ -0.22
SSBP2-212ENST00000509053 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSBP2-212ENST00000509053 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
SSBP2-212ENST00000509053 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
SSBP2-212ENST00000509053 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
SSBP2-212ENST00000509053 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
SSBP2-212ENST00000509053 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
SSBP2-212ENST00000509053 IGF1RP08069 1367 aa13.58□□□□□ -0.24
SSBP2-212ENST00000509053 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
SSBP2-212ENST00000509053 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
SSBP2-212ENST00000509053 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
SSBP2-212ENST00000509053 EEA1Q15075 1411 aa13.55□□□□□ -0.24
SSBP2-212ENST00000509053 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
SSBP2-212ENST00000509053 POLA2Q14181 598 aa13.53□□□□□ -0.24
SSBP2-212ENST00000509053 CUL7Q14999 1698 aa13.52□□□□□ -0.24
SSBP2-212ENST00000509053 MAGI1Q96QZ7 1491 aaPredicted RBP13.51□□□□□ -0.25
SSBP2-212ENST00000509053 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
SSBP2-212ENST00000509053 CHD1O14646 1710 aa13.49□□□□□ -0.25
SSBP2-212ENST00000509053 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
SSBP2-212ENST00000509053 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
SSBP2-212ENST00000509053 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
SSBP2-212ENST00000509053 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
SSBP2-212ENST00000509053 KIF21BO75037 1637 aa13.46□□□□□ -0.25
SSBP2-212ENST00000509053 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
SSBP2-212ENST00000509053 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
SSBP2-212ENST00000509053 FBLN2P98095 1184 aa13.43□□□□□ -0.26
SSBP2-212ENST00000509053 LOC105371045A0A1W2PR82 267 aa13.41□□□□□ -0.26
SSBP2-212ENST00000509053 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
SSBP2-212ENST00000509053 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
SSBP2-212ENST00000509053 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
SSBP2-212ENST00000509053 GOLGA3Q08378 1498 aa13.38□□□□□ -0.27
SSBP2-212ENST00000509053 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
SSBP2-212ENST00000509053 NUP160Q12769 1436 aa13.35□□□□□ -0.27
SSBP2-212ENST00000509053 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
SSBP2-212ENST00000509053 UBTFP17480 764 aaKnown RBP13.31□□□□□ -0.28
SSBP2-212ENST00000509053 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
SSBP2-212ENST00000509053 KIAA0586Q9BVV6 1533 aa13.28□□□□□ -0.28
SSBP2-212ENST00000509053 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
SSBP2-212ENST00000509053 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.28
SSBP2-212ENST00000509053 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
SSBP2-212ENST00000509053 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
SSBP2-212ENST00000509053 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
SSBP2-212ENST00000509053 REM2Q8IYK8 340 aaPredicted RBP13.23□□□□□ -0.29
SSBP2-212ENST00000509053 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
SSBP2-212ENST00000509053 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
SSBP2-212ENST00000509053 ERCC6L2Q5T890 1561 aa13.22□□□□□ -0.29
SSBP2-212ENST00000509053 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
SSBP2-212ENST00000509053 UGGT2Q9NYU1 1516 aa13.22□□□□□ -0.29
SSBP2-212ENST00000509053 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
SSBP2-212ENST00000509053 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
SSBP2-212ENST00000509053 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
SSBP2-212ENST00000509053 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
SSBP2-212ENST00000509053 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
SSBP2-212ENST00000509053 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
SSBP2-212ENST00000509053 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
SSBP2-212ENST00000509053 ARXQ96QS3 562 aa13.18□□□□□ -0.3
SSBP2-212ENST00000509053 ARHGAP35Q9NRY4 1499 aa13.17□□□□□ -0.3
SSBP2-212ENST00000509053 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
SSBP2-212ENST00000509053 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
SSBP2-212ENST00000509053 CLIP1P30622 1438 aa13.16□□□□□ -0.3
SSBP2-212ENST00000509053 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
SSBP2-212ENST00000509053 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
SSBP2-212ENST00000509053 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
SSBP2-212ENST00000509053 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
SSBP2-212ENST00000509053 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSBP2-212ENST00000509053 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
SSBP2-212ENST00000509053 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
SSBP2-212ENST00000509053 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
SSBP2-212ENST00000509053 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
SSBP2-212ENST00000509053 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
SSBP2-212ENST00000509053 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
SSBP2-212ENST00000509053 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
SSBP2-212ENST00000509053 HAX1O00165 279 aa13.06□□□□□ -0.32
SSBP2-212ENST00000509053 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
SSBP2-212ENST00000509053 PTPRGP23470 1445 aa13.02□□□□□ -0.32
SSBP2-212ENST00000509053 PLB1Q6P1J6 1458 aa13.02□□□□□ -0.33
SSBP2-212ENST00000509053 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
SSBP2-212ENST00000509053 ABCA8O94911 1581 aa13.01□□□□□ -0.33
SSBP2-212ENST00000509053 LRRIQ1Q96JM4 1722 aa13.01□□□□□ -0.33
SSBP2-212ENST00000509053 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
SSBP2-212ENST00000509053 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
SSBP2-212ENST00000509053 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
SSBP2-212ENST00000509053 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms