RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
SSBP2-212ENST00000509053 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
SSBP2-212ENST00000509053 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
SSBP2-212ENST00000509053 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
SSBP2-212ENST00000509053 FOXD1Q16676 465 aa19.4■□□□□ 0.7
SSBP2-212ENST00000509053 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
SSBP2-212ENST00000509053 POTEDQ86YR6 584 aa18.69■□□□□ 0.58
SSBP2-212ENST00000509053 MSH5O43196 834 aa18.28■□□□□ 0.52
SSBP2-212ENST00000509053 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
SSBP2-212ENST00000509053 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
SSBP2-212ENST00000509053 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
SSBP2-212ENST00000509053 ADRA2BP18089 450 aa17.66■□□□□ 0.42
SSBP2-212ENST00000509053 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
SSBP2-212ENST00000509053 ABCC9O60706 1549 aa16.43■□□□□ 0.22
SSBP2-212ENST00000509053 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
SSBP2-212ENST00000509053 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
SSBP2-212ENST00000509053 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
SSBP2-212ENST00000509053 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
SSBP2-212ENST00000509053 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
SSBP2-212ENST00000509053 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
SSBP2-212ENST00000509053 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
SSBP2-212ENST00000509053 NACADO15069 1562 aa15.93■□□□□ 0.14
SSBP2-212ENST00000509053 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
SSBP2-212ENST00000509053 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
SSBP2-212ENST00000509053 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
SSBP2-212ENST00000509053 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
SSBP2-212ENST00000509053 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
SSBP2-212ENST00000509053 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
SSBP2-212ENST00000509053 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
SSBP2-212ENST00000509053 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
SSBP2-212ENST00000509053 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.07
SSBP2-212ENST00000509053 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
SSBP2-212ENST00000509053 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
SSBP2-212ENST00000509053 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
SSBP2-212ENST00000509053 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.05
SSBP2-212ENST00000509053 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.05
SSBP2-212ENST00000509053 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.05
SSBP2-212ENST00000509053 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
SSBP2-212ENST00000509053 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
SSBP2-212ENST00000509053 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
SSBP2-212ENST00000509053 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
SSBP2-212ENST00000509053 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
SSBP2-212ENST00000509053 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
SSBP2-212ENST00000509053 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
SSBP2-212ENST00000509053 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
SSBP2-212ENST00000509053 WIZO95785 1651 aa14.83□□□□□ -0.03
SSBP2-212ENST00000509053 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
SSBP2-212ENST00000509053 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
SSBP2-212ENST00000509053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
SSBP2-212ENST00000509053 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
SSBP2-212ENST00000509053 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
SSBP2-212ENST00000509053 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
SSBP2-212ENST00000509053 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
SSBP2-212ENST00000509053 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
SSBP2-212ENST00000509053 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
SSBP2-212ENST00000509053 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
SSBP2-212ENST00000509053 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
SSBP2-212ENST00000509053 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
SSBP2-212ENST00000509053 POTEHQ6S545 545 aa14.52□□□□□ -0.08
SSBP2-212ENST00000509053 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
SSBP2-212ENST00000509053 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
SSBP2-212ENST00000509053 DSG3P32926 999 aa14.45□□□□□ -0.1
SSBP2-212ENST00000509053 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
SSBP2-212ENST00000509053 NESP48681 1621 aa14.34□□□□□ -0.11
SSBP2-212ENST00000509053 CAPN15O75808 1086 aa14.31□□□□□ -0.12
SSBP2-212ENST00000509053 CFTRP13569 1480 aa14.28□□□□□ -0.12
SSBP2-212ENST00000509053 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
SSBP2-212ENST00000509053 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.13
SSBP2-212ENST00000509053 MYT1Q01538 1121 aa14.25□□□□□ -0.13
SSBP2-212ENST00000509053 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
SSBP2-212ENST00000509053 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
SSBP2-212ENST00000509053 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
SSBP2-212ENST00000509053 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
SSBP2-212ENST00000509053 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
SSBP2-212ENST00000509053 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
SSBP2-212ENST00000509053 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
SSBP2-212ENST00000509053 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
SSBP2-212ENST00000509053 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
SSBP2-212ENST00000509053 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
SSBP2-212ENST00000509053 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
SSBP2-212ENST00000509053 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
SSBP2-212ENST00000509053 CUX1P39880 1505 aa14.01□□□□□ -0.17
SSBP2-212ENST00000509053 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
SSBP2-212ENST00000509053 SYNJ1O43426 1573 aa14□□□□□ -0.17
SSBP2-212ENST00000509053 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
SSBP2-212ENST00000509053 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
SSBP2-212ENST00000509053 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
SSBP2-212ENST00000509053 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
SSBP2-212ENST00000509053 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
SSBP2-212ENST00000509053 WDR62O43379 1518 aa13.96□□□□□ -0.17
SSBP2-212ENST00000509053 ABCB7O75027 752 aa13.95□□□□□ -0.18
SSBP2-212ENST00000509053 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
SSBP2-212ENST00000509053 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
SSBP2-212ENST00000509053 APLP2Q06481 763 aa13.94□□□□□ -0.18
SSBP2-212ENST00000509053 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
SSBP2-212ENST00000509053 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
SSBP2-212ENST00000509053 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
SSBP2-212ENST00000509053 KCNA4P22459 653 aa13.86□□□□□ -0.19
SSBP2-212ENST00000509053 CUX2O14529 1486 aa13.85□□□□□ -0.19
SSBP2-212ENST00000509053 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms