RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
SNCAIP-211ENST00000509023 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
SNCAIP-211ENST00000509023 NUP160Q12769 1436 aa23.8■■□□□ 1.4
SNCAIP-211ENST00000509023 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
SNCAIP-211ENST00000509023 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
SNCAIP-211ENST00000509023 IQGAP2Q13576 1575 aa23.75■■□□□ 1.39
SNCAIP-211ENST00000509023 CLIP1P30622 1438 aa23.75■■□□□ 1.39
SNCAIP-211ENST00000509023 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
SNCAIP-211ENST00000509023 EFCAB5A4FU69 1503 aa23.62■■□□□ 1.37
SNCAIP-211ENST00000509023 UGGT2Q9NYU1 1516 aa23.62■■□□□ 1.37
SNCAIP-211ENST00000509023 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
SNCAIP-211ENST00000509023 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
SNCAIP-211ENST00000509023 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
SNCAIP-211ENST00000509023 ARAP1Q96P48 1450 aa23.58■■□□□ 1.36
SNCAIP-211ENST00000509023 OSCARQ8IYS5 282 aa23.58■■□□□ 1.36
SNCAIP-211ENST00000509023 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
SNCAIP-211ENST00000509023 DISP1Q96F81 1524 aa23.54■■□□□ 1.36
SNCAIP-211ENST00000509023 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
SNCAIP-211ENST00000509023 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
SNCAIP-211ENST00000509023 KIAA0556O60303 1618 aa23.52■■□□□ 1.36
SNCAIP-211ENST00000509023 PRG4Q92954 1404 aaPredicted RBP23.49■■□□□ 1.35
SNCAIP-211ENST00000509023 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
SNCAIP-211ENST00000509023 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
SNCAIP-211ENST00000509023 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
SNCAIP-211ENST00000509023 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
SNCAIP-211ENST00000509023 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
SNCAIP-211ENST00000509023 PCF11O94913 1555 aaKnown RBP23.34■■□□□ 1.33
SNCAIP-211ENST00000509023 CASKIN1Q8WXD9 1431 aa23.3■■□□□ 1.32
SNCAIP-211ENST00000509023 PTPRGP23470 1445 aa23.29■■□□□ 1.32
SNCAIP-211ENST00000509023 FYCO1Q9BQS8 1478 aa23.29■■□□□ 1.32
SNCAIP-211ENST00000509023 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
SNCAIP-211ENST00000509023 PLB1Q6P1J6 1458 aa23.24■■□□□ 1.31
SNCAIP-211ENST00000509023 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
SNCAIP-211ENST00000509023 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
SNCAIP-211ENST00000509023 APLP2Q06481 763 aa23.21■■□□□ 1.31
SNCAIP-211ENST00000509023 ABCA8O94911 1581 aa23.2■■□□□ 1.31
SNCAIP-211ENST00000509023 ARHGEF11O15085 1522 aa23.2■■□□□ 1.31
SNCAIP-211ENST00000509023 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
SNCAIP-211ENST00000509023 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
SNCAIP-211ENST00000509023 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
SNCAIP-211ENST00000509023 TIAM1Q13009 1591 aa23.15■■□□□ 1.3
SNCAIP-211ENST00000509023 MAP3K1Q13233 1512 aa23.14■■□□□ 1.29
SNCAIP-211ENST00000509023 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
SNCAIP-211ENST00000509023 CFAP43Q8NDM7 1665 aa23.14■■□□□ 1.29
SNCAIP-211ENST00000509023 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
SNCAIP-211ENST00000509023 RIMBP3CA6NJZ7 1639 aa23.13■■□□□ 1.29
SNCAIP-211ENST00000509023 RIMBP3BA6NNM3 1639 aa23.13■■□□□ 1.29
SNCAIP-211ENST00000509023 RIMBP3Q9UFD9 1639 aa23.13■■□□□ 1.29
SNCAIP-211ENST00000509023 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
SNCAIP-211ENST00000509023 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
SNCAIP-211ENST00000509023 ABCC2Q92887 1545 aa23.11■■□□□ 1.29
SNCAIP-211ENST00000509023 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
SNCAIP-211ENST00000509023 UHRF1BP1LA0JNW5 1464 aa23.07■■□□□ 1.28
SNCAIP-211ENST00000509023 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
SNCAIP-211ENST00000509023 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
SNCAIP-211ENST00000509023 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
SNCAIP-211ENST00000509023 ATP10BO94823 1461 aa23.03■■□□□ 1.28
SNCAIP-211ENST00000509023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
SNCAIP-211ENST00000509023 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
SNCAIP-211ENST00000509023 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
SNCAIP-211ENST00000509023 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
SNCAIP-211ENST00000509023 KDM5BQ9UGL1 1544 aa22.97■■□□□ 1.27
SNCAIP-211ENST00000509023 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
SNCAIP-211ENST00000509023 EHBP1L1Q8N3D4 1523 aa22.96■■□□□ 1.27
SNCAIP-211ENST00000509023 ZCCHC11Q5TAX3 1644 aaKnown RBP22.96■■□□□ 1.27
SNCAIP-211ENST00000509023 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
SNCAIP-211ENST00000509023 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.26
SNCAIP-211ENST00000509023 TROQ12816 1431 aaPredicted RBP22.89■■□□□ 1.26
SNCAIP-211ENST00000509023 SUPT6HQ7KZ85 1726 aaKnown RBP22.88■■□□□ 1.25
SNCAIP-211ENST00000509023 NPM1P06748 294 aaKnown RBP eCLIP22.85■■□□□ 1.25
SNCAIP-211ENST00000509023 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
SNCAIP-211ENST00000509023 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
SNCAIP-211ENST00000509023 KIF14Q15058 1648 aa22.81■■□□□ 1.24
SNCAIP-211ENST00000509023 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
SNCAIP-211ENST00000509023 ASXL2Q76L83 1435 aa22.78■■□□□ 1.24
SNCAIP-211ENST00000509023 WDR7Q9Y4E6 1490 aa22.77■■□□□ 1.24
SNCAIP-211ENST00000509023 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
SNCAIP-211ENST00000509023 KCNH8Q96L42 1107 aa22.73■■□□□ 1.23
SNCAIP-211ENST00000509023 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
SNCAIP-211ENST00000509023 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
SNCAIP-211ENST00000509023 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
SNCAIP-211ENST00000509023 CCNB3Q8WWL7 1395 aa22.71■■□□□ 1.23
SNCAIP-211ENST00000509023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
SNCAIP-211ENST00000509023 RRBP1Q9P2E9 1410 aaKnown RBP22.69■■□□□ 1.22
SNCAIP-211ENST00000509023 TTC37Q6PGP7 1564 aa22.68■■□□□ 1.22
SNCAIP-211ENST00000509023 FGD6Q6ZV73 1430 aa22.67■■□□□ 1.22
SNCAIP-211ENST00000509023 ITSN2Q9NZM3 1697 aa22.65■■□□□ 1.22
SNCAIP-211ENST00000509023 GPATCH8Q9UKJ3 1502 aaKnown RBP22.65■■□□□ 1.22
SNCAIP-211ENST00000509023 CDC42BPAQ5VT25 1732 aa22.64■■□□□ 1.22
SNCAIP-211ENST00000509023 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
SNCAIP-211ENST00000509023 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
SNCAIP-211ENST00000509023 ABCA9Q8IUA7 1624 aa22.61■■□□□ 1.21
SNCAIP-211ENST00000509023 PTPN23Q9H3S7 1636 aa22.6■■□□□ 1.21
SNCAIP-211ENST00000509023 MYO5CQ9NQX4 1742 aa22.6■■□□□ 1.21
SNCAIP-211ENST00000509023 PREX2Q70Z35 1606 aa22.6■■□□□ 1.21
SNCAIP-211ENST00000509023 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
SNCAIP-211ENST00000509023 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.21
SNCAIP-211ENST00000509023 CDC42BPBQ9Y5S2 1711 aa22.56■■□□□ 1.2
SNCAIP-211ENST00000509023 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
SNCAIP-211ENST00000509023 PLCH2O75038 1416 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms