RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
SNCAIP-211ENST00000509023 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.45
SNCAIP-211ENST00000509023 ABCC9O60706 1549 aa29.1■■■□□ 2.25
SNCAIP-211ENST00000509023 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
SNCAIP-211ENST00000509023 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
SNCAIP-211ENST00000509023 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
SNCAIP-211ENST00000509023 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
SNCAIP-211ENST00000509023 NACADO15069 1562 aa28.39■■■□□ 2.14
SNCAIP-211ENST00000509023 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
SNCAIP-211ENST00000509023 SHROOM4Q9ULL8 1493 aa27.87■■■□□ 2.05
SNCAIP-211ENST00000509023 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
SNCAIP-211ENST00000509023 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
SNCAIP-211ENST00000509023 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.98
SNCAIP-211ENST00000509023 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
SNCAIP-211ENST00000509023 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
SNCAIP-211ENST00000509023 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
SNCAIP-211ENST00000509023 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
SNCAIP-211ENST00000509023 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
SNCAIP-211ENST00000509023 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
SNCAIP-211ENST00000509023 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
SNCAIP-211ENST00000509023 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
SNCAIP-211ENST00000509023 WIZO95785 1651 aa26.46■■□□□ 1.83
SNCAIP-211ENST00000509023 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
SNCAIP-211ENST00000509023 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
SNCAIP-211ENST00000509023 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
SNCAIP-211ENST00000509023 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
SNCAIP-211ENST00000509023 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
SNCAIP-211ENST00000509023 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
SNCAIP-211ENST00000509023 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
SNCAIP-211ENST00000509023 HMGXB3Q12766 1538 aa26.14■■□□□ 1.78
SNCAIP-211ENST00000509023 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
SNCAIP-211ENST00000509023 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.74
SNCAIP-211ENST00000509023 CFTRP13569 1480 aa25.49■■□□□ 1.67
SNCAIP-211ENST00000509023 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
SNCAIP-211ENST00000509023 NESP48681 1621 aa25.41■■□□□ 1.66
SNCAIP-211ENST00000509023 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
SNCAIP-211ENST00000509023 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
SNCAIP-211ENST00000509023 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
SNCAIP-211ENST00000509023 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
SNCAIP-211ENST00000509023 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
SNCAIP-211ENST00000509023 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.62
SNCAIP-211ENST00000509023 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
SNCAIP-211ENST00000509023 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
SNCAIP-211ENST00000509023 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
SNCAIP-211ENST00000509023 TRIM41Q8WV44 630 aa25.05■■□□□ 1.6
SNCAIP-211ENST00000509023 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
SNCAIP-211ENST00000509023 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
SNCAIP-211ENST00000509023 CUX1P39880 1505 aa25■■□□□ 1.59
SNCAIP-211ENST00000509023 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
SNCAIP-211ENST00000509023 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
SNCAIP-211ENST00000509023 URB2Q14146 1524 aaKnown RBP24.92■■□□□ 1.58
SNCAIP-211ENST00000509023 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
SNCAIP-211ENST00000509023 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
SNCAIP-211ENST00000509023 TOPBP1Q92547 1522 aa24.89■■□□□ 1.58
SNCAIP-211ENST00000509023 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
SNCAIP-211ENST00000509023 WDR62O43379 1518 aa24.8■■□□□ 1.56
SNCAIP-211ENST00000509023 FGD5Q6ZNL6 1462 aa24.79■■□□□ 1.56
SNCAIP-211ENST00000509023 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
SNCAIP-211ENST00000509023 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.54
SNCAIP-211ENST00000509023 SOGA1O94964 1423 aa24.64■■□□□ 1.54
SNCAIP-211ENST00000509023 CUX2O14529 1486 aa24.6■■□□□ 1.53
SNCAIP-211ENST00000509023 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
SNCAIP-211ENST00000509023 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
SNCAIP-211ENST00000509023 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
SNCAIP-211ENST00000509023 TARBP1Q13395 1621 aaKnown RBP24.56■■□□□ 1.52
SNCAIP-211ENST00000509023 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
SNCAIP-211ENST00000509023 IFT140Q96RY7 1462 aa24.53■■□□□ 1.52
SNCAIP-211ENST00000509023 EEA1Q15075 1411 aa24.51■■□□□ 1.51
SNCAIP-211ENST00000509023 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
SNCAIP-211ENST00000509023 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
SNCAIP-211ENST00000509023 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
SNCAIP-211ENST00000509023 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
SNCAIP-211ENST00000509023 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
SNCAIP-211ENST00000509023 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
SNCAIP-211ENST00000509023 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.49
SNCAIP-211ENST00000509023 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
SNCAIP-211ENST00000509023 IGF1RP08069 1367 aa24.32■■□□□ 1.48
SNCAIP-211ENST00000509023 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
SNCAIP-211ENST00000509023 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
SNCAIP-211ENST00000509023 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
SNCAIP-211ENST00000509023 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
SNCAIP-211ENST00000509023 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
SNCAIP-211ENST00000509023 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
SNCAIP-211ENST00000509023 KIF21BO75037 1637 aa24.23■■□□□ 1.47
SNCAIP-211ENST00000509023 CUL7Q14999 1698 aa24.21■■□□□ 1.47
SNCAIP-211ENST00000509023 CARMIL1Q5VZK9 1371 aa24.2■■□□□ 1.46
SNCAIP-211ENST00000509023 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
SNCAIP-211ENST00000509023 GOLGA3Q08378 1498 aa24.16■■□□□ 1.46
SNCAIP-211ENST00000509023 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
SNCAIP-211ENST00000509023 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
SNCAIP-211ENST00000509023 MAGI1Q96QZ7 1491 aaPredicted RBP24.11■■□□□ 1.45
SNCAIP-211ENST00000509023 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
SNCAIP-211ENST00000509023 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
SNCAIP-211ENST00000509023 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
SNCAIP-211ENST00000509023 TNIKQ9UKE5 1360 aa23.98■■□□□ 1.43
SNCAIP-211ENST00000509023 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
SNCAIP-211ENST00000509023 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
SNCAIP-211ENST00000509023 FBLN2P98095 1184 aa23.94■■□□□ 1.42
SNCAIP-211ENST00000509023 CHD1O14646 1710 aa23.89■■□□□ 1.41
SNCAIP-211ENST00000509023 CTTNBP2Q8WZ74 1663 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms