RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CUL7Q14999 1698 aa25.55■■□□□ 1.68
UBE2D3-228ENST00000508974 IGF1RP08069 1367 aa25.52■■□□□ 1.68
UBE2D3-228ENST00000508974 RUSC2Q8N2Y8 1516 aa25.52■■□□□ 1.68
UBE2D3-228ENST00000508974 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
UBE2D3-228ENST00000508974 PRG4Q92954 1404 aaPredicted RBP25.44■■□□□ 1.66
UBE2D3-228ENST00000508974 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
UBE2D3-228ENST00000508974 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
UBE2D3-228ENST00000508974 KIAA0586Q9BVV6 1533 aa25.33■■□□□ 1.65
UBE2D3-228ENST00000508974 IQGAP2Q13576 1575 aa25.22■■□□□ 1.63
UBE2D3-228ENST00000508974 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
UBE2D3-228ENST00000508974 TTBK1Q5TCY1 1321 aaPredicted RBP25.16■■□□□ 1.62
UBE2D3-228ENST00000508974 ADCY10Q96PN6 1610 aa25.14■■□□□ 1.61
UBE2D3-228ENST00000508974 CTTNBP2Q8WZ74 1663 aa25.11■■□□□ 1.61
UBE2D3-228ENST00000508974 CARMIL2Q6F5E8 1435 aa25.09■■□□□ 1.61
UBE2D3-228ENST00000508974 KIF13AQ9H1H9 1805 aa25.08■■□□□ 1.61
UBE2D3-228ENST00000508974 PTPRGP23470 1445 aa25.05■■□□□ 1.6
UBE2D3-228ENST00000508974 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
UBE2D3-228ENST00000508974 DISP1Q96F81 1524 aa25.03■■□□□ 1.6
UBE2D3-228ENST00000508974 TNIKQ9UKE5 1360 aa25.03■■□□□ 1.6
UBE2D3-228ENST00000508974 PRXQ9BXM0 1461 aa25.01■■□□□ 1.59
UBE2D3-228ENST00000508974 UGGT2Q9NYU1 1516 aa25.01■■□□□ 1.59
UBE2D3-228ENST00000508974 KIAA0556O60303 1618 aa24.99■■□□□ 1.59
UBE2D3-228ENST00000508974 MAPKBP1O60336 1514 aa24.97■■□□□ 1.59
UBE2D3-228ENST00000508974 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
UBE2D3-228ENST00000508974 ABCC10Q5T3U5 1492 aa24.9■■□□□ 1.58
UBE2D3-228ENST00000508974 CSRNP3Q8WYN3 585 aa24.9■■□□□ 1.58
UBE2D3-228ENST00000508974 FAM69CQ0P6D2 419 aa24.89■■□□□ 1.58
UBE2D3-228ENST00000508974 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
UBE2D3-228ENST00000508974 ABCC2Q92887 1545 aa24.88■■□□□ 1.57
UBE2D3-228ENST00000508974 UACAQ9BZF9 1416 aa24.87■■□□□ 1.57
UBE2D3-228ENST00000508974 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
UBE2D3-228ENST00000508974 UHRF1BP1LA0JNW5 1464 aa24.84■■□□□ 1.57
UBE2D3-228ENST00000508974 GOLGA3Q08378 1498 aa24.83■■□□□ 1.57
UBE2D3-228ENST00000508974 EEA1Q15075 1411 aa24.83■■□□□ 1.57
UBE2D3-228ENST00000508974 ZCCHC11Q5TAX3 1644 aaKnown RBP24.8■■□□□ 1.56
UBE2D3-228ENST00000508974 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
UBE2D3-228ENST00000508974 PLB1Q6P1J6 1458 aa24.77■■□□□ 1.56
UBE2D3-228ENST00000508974 P3H3Q8IVL6 736 aa24.75■■□□□ 1.55
UBE2D3-228ENST00000508974 KDM5BQ9UGL1 1544 aa24.75■■□□□ 1.55
UBE2D3-228ENST00000508974 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-228ENST00000508974 ABCA8O94911 1581 aa24.71■■□□□ 1.55
UBE2D3-228ENST00000508974 KIF21BO75037 1637 aa24.7■■□□□ 1.54
UBE2D3-228ENST00000508974 SAMD9Q5K651 1589 aa24.69■■□□□ 1.54
UBE2D3-228ENST00000508974 EHMT2Q96KQ7 1210 aa24.69■■□□□ 1.54
UBE2D3-228ENST00000508974 GLI2P10070 1586 aa24.64■■□□□ 1.54
UBE2D3-228ENST00000508974 KDM6BO15054 1643 aa24.64■■□□□ 1.53
UBE2D3-228ENST00000508974 PPRC1Q5VV67 1664 aaKnown RBP24.63■■□□□ 1.53
UBE2D3-228ENST00000508974 EPRSP07814 1512 aaKnown RBP24.63■■□□□ 1.53
UBE2D3-228ENST00000508974 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
UBE2D3-228ENST00000508974 WDR7Q9Y4E6 1490 aa24.59■■□□□ 1.53
UBE2D3-228ENST00000508974 MAP3K4Q9Y6R4 1608 aa24.59■■□□□ 1.53
UBE2D3-228ENST00000508974 FHOD3Q2V2M9 1422 aa24.56■■□□□ 1.52
UBE2D3-228ENST00000508974 RAPGEF6Q8TEU7 1601 aa24.55■■□□□ 1.52
UBE2D3-228ENST00000508974 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
UBE2D3-228ENST00000508974 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
UBE2D3-228ENST00000508974 EFCAB5A4FU69 1503 aa24.48■■□□□ 1.51
UBE2D3-228ENST00000508974 ATP10BO94823 1461 aa24.48■■□□□ 1.51
UBE2D3-228ENST00000508974 FOXD1Q16676 465 aa24.48■■□□□ 1.51
UBE2D3-228ENST00000508974 CFAP43Q8NDM7 1665 aa24.46■■□□□ 1.51
UBE2D3-228ENST00000508974 TEX14Q8IWB6 1497 aa24.44■■□□□ 1.5
UBE2D3-228ENST00000508974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.43■■□□□ 1.5
UBE2D3-228ENST00000508974 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
UBE2D3-228ENST00000508974 NUP153P49790 1475 aaKnown RBP24.42■■□□□ 1.5
UBE2D3-228ENST00000508974 CD109Q6YHK3 1445 aa24.4■■□□□ 1.5
UBE2D3-228ENST00000508974 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-228ENST00000508974 MAGI3Q5TCQ9 1506 aa24.33■■□□□ 1.49
UBE2D3-228ENST00000508974 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
UBE2D3-228ENST00000508974 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
UBE2D3-228ENST00000508974 CDK13Q14004 1512 aaKnown RBP24.28■■□□□ 1.48
UBE2D3-228ENST00000508974 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
UBE2D3-228ENST00000508974 HECW1Q76N89 1606 aa24.24■■□□□ 1.47
UBE2D3-228ENST00000508974 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
UBE2D3-228ENST00000508974 PLEKHD1A6NEE1 506 aa24.22■■□□□ 1.47
UBE2D3-228ENST00000508974 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
UBE2D3-228ENST00000508974 KDM4FA0A1W2PPD8 638 aa24.17■■□□□ 1.46
UBE2D3-228ENST00000508974 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
UBE2D3-228ENST00000508974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.466e-33■□□□□ 10.7
UBE2D3-228ENST00000508974 ARAP3Q8WWN8 1544 aa24.14■■□□□ 1.45
UBE2D3-228ENST00000508974 PCF11O94913 1555 aaKnown RBP24.12■■□□□ 1.45
UBE2D3-228ENST00000508974 ADGRL1O94910 1474 aa24.12■■□□□ 1.45
UBE2D3-228ENST00000508974 NEO1Q92859 1461 aa24.1■■□□□ 1.45
UBE2D3-228ENST00000508974 KIF14Q15058 1648 aa24.06■■□□□ 1.44
UBE2D3-228ENST00000508974 CLIP1P30622 1438 aa24.06■■□□□ 1.44
UBE2D3-228ENST00000508974 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
UBE2D3-228ENST00000508974 FRMPD1Q5SYB0 1578 aa24.05■■□□□ 1.44
UBE2D3-228ENST00000508974 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
UBE2D3-228ENST00000508974 FANCAO15360 1455 aa24.05■■□□□ 1.44
UBE2D3-228ENST00000508974 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
UBE2D3-228ENST00000508974 MYO5CQ9NQX4 1742 aa24.03■■□□□ 1.44
UBE2D3-228ENST00000508974 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
UBE2D3-228ENST00000508974 CDK11AQ9UQ88 783 aaPredicted RBP24.01■■□□□ 1.43
UBE2D3-228ENST00000508974 RICTORQ6R327 1708 aa24■■□□□ 1.43
UBE2D3-228ENST00000508974 AKNAQ7Z591 1439 aa24■■□□□ 1.43
UBE2D3-228ENST00000508974 TROQ12816 1431 aaPredicted RBP23.98■■□□□ 1.43
UBE2D3-228ENST00000508974 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
UBE2D3-228ENST00000508974 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
UBE2D3-228ENST00000508974 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-228ENST00000508974 PLCH2O75038 1416 aa23.94■■□□□ 1.42
UBE2D3-228ENST00000508974 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.42
UBE2D3-228ENST00000508974 ARHGEF40Q8TER5 1519 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms