RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 EEA1Q15075 1411 aa17.59■□□□□ 0.41
SKI-204ENST00000508416 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
SKI-204ENST00000508416 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
SKI-204ENST00000508416 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
SKI-204ENST00000508416 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
SKI-204ENST00000508416 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
SKI-204ENST00000508416 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
SKI-204ENST00000508416 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
SKI-204ENST00000508416 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
SKI-204ENST00000508416 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
SKI-204ENST00000508416 IQGAP2Q13576 1575 aa17.44■□□□□ 0.38
SKI-204ENST00000508416 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
SKI-204ENST00000508416 KIF21BO75037 1637 aa17.39■□□□□ 0.38
SKI-204ENST00000508416 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
SKI-204ENST00000508416 CARMIL2Q6F5E8 1435 aa17.35■□□□□ 0.37
SKI-204ENST00000508416 UGGT2Q9NYU1 1516 aa17.34■□□□□ 0.37
SKI-204ENST00000508416 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
SKI-204ENST00000508416 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
SKI-204ENST00000508416 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
SKI-204ENST00000508416 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
SKI-204ENST00000508416 TTBK1Q5TCY1 1321 aaPredicted RBP17.3■□□□□ 0.36
SKI-204ENST00000508416 PTPRGP23470 1445 aa17.29■□□□□ 0.36
SKI-204ENST00000508416 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
SKI-204ENST00000508416 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.36
SKI-204ENST00000508416 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
SKI-204ENST00000508416 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
SKI-204ENST00000508416 SAMD9Q5K651 1589 aa17.18■□□□□ 0.34
SKI-204ENST00000508416 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
SKI-204ENST00000508416 ADCY10Q96PN6 1610 aa17.17■□□□□ 0.34
SKI-204ENST00000508416 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
SKI-204ENST00000508416 EFCAB5A4FU69 1503 aa17.12■□□□□ 0.33
SKI-204ENST00000508416 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
SKI-204ENST00000508416 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
SKI-204ENST00000508416 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
SKI-204ENST00000508416 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
SKI-204ENST00000508416 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
SKI-204ENST00000508416 ABCA8O94911 1581 aa17.07■□□□□ 0.32
SKI-204ENST00000508416 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
SKI-204ENST00000508416 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
SKI-204ENST00000508416 MAPKBP1O60336 1514 aa17.02■□□□□ 0.32
SKI-204ENST00000508416 CLIP1P30622 1438 aa17.02■□□□□ 0.31
SKI-204ENST00000508416 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
SKI-204ENST00000508416 RAPGEF6Q8TEU7 1601 aa17.01■□□□□ 0.31
SKI-204ENST00000508416 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
SKI-204ENST00000508416 FMN1Q68DA7 1419 aa16.98■□□□□ 0.31
SKI-204ENST00000508416 ASXL2Q76L83 1435 aa16.97■□□□□ 0.31
SKI-204ENST00000508416 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
SKI-204ENST00000508416 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
SKI-204ENST00000508416 ATP10BO94823 1461 aa16.96■□□□□ 0.31
SKI-204ENST00000508416 CEP162Q5TB80 1403 aa16.96■□□□□ 0.3
SKI-204ENST00000508416 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
SKI-204ENST00000508416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
SKI-204ENST00000508416 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
SKI-204ENST00000508416 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
SKI-204ENST00000508416 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
SKI-204ENST00000508416 DIP2BQ9P265 1576 aa16.91■□□□□ 0.3
SKI-204ENST00000508416 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
SKI-204ENST00000508416 WDR7Q9Y4E6 1490 aa16.89■□□□□ 0.29
SKI-204ENST00000508416 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
SKI-204ENST00000508416 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
SKI-204ENST00000508416 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
SKI-204ENST00000508416 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
SKI-204ENST00000508416 GLI2P10070 1586 aa16.85■□□□□ 0.29
SKI-204ENST00000508416 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
SKI-204ENST00000508416 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
SKI-204ENST00000508416 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
SKI-204ENST00000508416 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
SKI-204ENST00000508416 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
SKI-204ENST00000508416 CDK11AQ9UQ88 783 aaPredicted RBP16.81■□□□□ 0.28
SKI-204ENST00000508416 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
SKI-204ENST00000508416 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
SKI-204ENST00000508416 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
SKI-204ENST00000508416 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
SKI-204ENST00000508416 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
SKI-204ENST00000508416 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
SKI-204ENST00000508416 ABCA9Q8IUA7 1624 aa16.73■□□□□ 0.27
SKI-204ENST00000508416 TROQ12816 1431 aaPredicted RBP16.71■□□□□ 0.27
SKI-204ENST00000508416 TEX14Q8IWB6 1497 aa16.69■□□□□ 0.26
SKI-204ENST00000508416 MAGI3Q5TCQ9 1506 aa16.69■□□□□ 0.26
SKI-204ENST00000508416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■□ 22.9
SKI-204ENST00000508416 KIF14Q15058 1648 aa16.66■□□□□ 0.26
SKI-204ENST00000508416 TTC37Q6PGP7 1564 aa16.65■□□□□ 0.26
SKI-204ENST00000508416 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.26
SKI-204ENST00000508416 KDM6BO15054 1643 aa16.63■□□□□ 0.25
SKI-204ENST00000508416 TIAM1Q13009 1591 aa16.61■□□□□ 0.25
SKI-204ENST00000508416 APLP2Q06481 763 aa16.61■□□□□ 0.25
SKI-204ENST00000508416 PLCH2O75038 1416 aa16.61■□□□□ 0.25
SKI-204ENST00000508416 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
SKI-204ENST00000508416 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
SKI-204ENST00000508416 NEO1Q92859 1461 aa16.59■□□□□ 0.25
SKI-204ENST00000508416 COL17A1Q9UMD9 1497 aaPredicted RBP16.59■□□□□ 0.25
SKI-204ENST00000508416 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
SKI-204ENST00000508416 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
SKI-204ENST00000508416 EHBP1L1Q8N3D4 1523 aa16.57■□□□□ 0.24
SKI-204ENST00000508416 FANCAO15360 1455 aa16.57■□□□□ 0.24
SKI-204ENST00000508416 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
SKI-204ENST00000508416 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
SKI-204ENST00000508416 AKNAQ7Z591 1439 aa16.55■□□□□ 0.24
SKI-204ENST00000508416 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
SKI-204ENST00000508416 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms