RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
UBE2D3-223ENST00000508249 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-223ENST00000508249 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
UBE2D3-223ENST00000508249 KDM6BO15054 1643 aa16.87■□□□□ 0.29
UBE2D3-223ENST00000508249 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.295e-6■■■■■ 29.2
UBE2D3-223ENST00000508249 TSPOAP1O95153 1857 aa16.82■□□□□ 0.28
UBE2D3-223ENST00000508249 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
UBE2D3-223ENST00000508249 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
UBE2D3-223ENST00000508249 FAM69CQ0P6D2 419 aa16.78■□□□□ 0.28
UBE2D3-223ENST00000508249 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
UBE2D3-223ENST00000508249 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
UBE2D3-223ENST00000508249 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
UBE2D3-223ENST00000508249 GLI2P10070 1586 aa16.64■□□□□ 0.25
UBE2D3-223ENST00000508249 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
UBE2D3-223ENST00000508249 CUL7Q14999 1698 aa16.61■□□□□ 0.25
UBE2D3-223ENST00000508249 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-223ENST00000508249 MAP3K4Q9Y6R4 1608 aa16.59■□□□□ 0.25
UBE2D3-223ENST00000508249 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE2D3-223ENST00000508249 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
UBE2D3-223ENST00000508249 ASXL2Q76L83 1435 aa16.54■□□□□ 0.24
UBE2D3-223ENST00000508249 IGF1RP08069 1367 aa16.51■□□□□ 0.23
UBE2D3-223ENST00000508249 UHRF1BP1LA0JNW5 1464 aa16.5■□□□□ 0.23
UBE2D3-223ENST00000508249 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
UBE2D3-223ENST00000508249 PTPRGP23470 1445 aa16.49■□□□□ 0.23
UBE2D3-223ENST00000508249 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
UBE2D3-223ENST00000508249 ZCCHC11Q5TAX3 1644 aaKnown RBP16.47■□□□□ 0.23
UBE2D3-223ENST00000508249 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
UBE2D3-223ENST00000508249 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
UBE2D3-223ENST00000508249 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
UBE2D3-223ENST00000508249 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
UBE2D3-223ENST00000508249 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
UBE2D3-223ENST00000508249 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
UBE2D3-223ENST00000508249 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-223ENST00000508249 TEX14Q8IWB6 1497 aa16.39■□□□□ 0.21
UBE2D3-223ENST00000508249 KIF21BO75037 1637 aa16.37■□□□□ 0.21
UBE2D3-223ENST00000508249 CARMIL2Q6F5E8 1435 aa16.37■□□□□ 0.21
UBE2D3-223ENST00000508249 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
UBE2D3-223ENST00000508249 UGGT2Q9NYU1 1516 aa16.35■□□□□ 0.21
UBE2D3-223ENST00000508249 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
UBE2D3-223ENST00000508249 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
UBE2D3-223ENST00000508249 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
UBE2D3-223ENST00000508249 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
UBE2D3-223ENST00000508249 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
UBE2D3-223ENST00000508249 ADAMTSL3P82987 1691 aa16.27■□□□□ 0.2
UBE2D3-223ENST00000508249 ABCA8O94911 1581 aa16.25■□□□□ 0.19
UBE2D3-223ENST00000508249 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
UBE2D3-223ENST00000508249 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
UBE2D3-223ENST00000508249 CD109Q6YHK3 1445 aa16.19■□□□□ 0.18
UBE2D3-223ENST00000508249 ARAP3Q8WWN8 1544 aa16.19■□□□□ 0.18
UBE2D3-223ENST00000508249 PTPRMP28827 1452 aa16.18■□□□□ 0.18
UBE2D3-223ENST00000508249 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
UBE2D3-223ENST00000508249 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
UBE2D3-223ENST00000508249 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
UBE2D3-223ENST00000508249 PCF11O94913 1555 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-223ENST00000508249 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
UBE2D3-223ENST00000508249 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
UBE2D3-223ENST00000508249 ABCA9Q8IUA7 1624 aa16.13■□□□□ 0.17
UBE2D3-223ENST00000508249 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.17
UBE2D3-223ENST00000508249 RIMS1Q86UR5 1692 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-223ENST00000508249 ARHGEF40Q8TER5 1519 aa16.05■□□□□ 0.16
UBE2D3-223ENST00000508249 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
UBE2D3-223ENST00000508249 RICTORQ6R327 1708 aa16.04■□□□□ 0.16
UBE2D3-223ENST00000508249 ATP10BO94823 1461 aa16.03■□□□□ 0.16
UBE2D3-223ENST00000508249 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
UBE2D3-223ENST00000508249 NEO1Q92859 1461 aa16■□□□□ 0.15
UBE2D3-223ENST00000508249 SAMD9Q5K651 1589 aa15.97■□□□□ 0.15
UBE2D3-223ENST00000508249 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
UBE2D3-223ENST00000508249 RAPGEF3O95398 923 aa15.96■□□□□ 0.15
UBE2D3-223ENST00000508249 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
UBE2D3-223ENST00000508249 RAPGEF6Q8TEU7 1601 aa15.94■□□□□ 0.14
UBE2D3-223ENST00000508249 ZMYM4Q5VZL5 1548 aa15.94■□□□□ 0.14
UBE2D3-223ENST00000508249 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
UBE2D3-223ENST00000508249 FER1L4A9Z1Z3 1794 aa15.91■□□□□ 0.14
UBE2D3-223ENST00000508249 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
UBE2D3-223ENST00000508249 HSPA2P54652 639 aa15.89■□□□□ 0.13
UBE2D3-223ENST00000508249 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
UBE2D3-223ENST00000508249 ILDR2Q71H61 639 aa15.88■□□□□ 0.13
UBE2D3-223ENST00000508249 STRCQ7RTU9 1775 aa15.87■□□□□ 0.13
UBE2D3-223ENST00000508249 FHOD3Q2V2M9 1422 aa15.87■□□□□ 0.13
UBE2D3-223ENST00000508249 CFAP74Q9C0B2 1584 aa15.86■□□□□ 0.13
UBE2D3-223ENST00000508249 PREX1Q8TCU6 1659 aa15.86■□□□□ 0.13
UBE2D3-223ENST00000508249 YEATS2Q9ULM3 1422 aa15.85■□□□□ 0.13
UBE2D3-223ENST00000508249 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
UBE2D3-223ENST00000508249 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
UBE2D3-223ENST00000508249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.136e-33■□□□□ 10.7
UBE2D3-223ENST00000508249 CERKQ8TCT0 537 aa15.84■□□□□ 0.13
UBE2D3-223ENST00000508249 FANCAO15360 1455 aa15.84■□□□□ 0.13
UBE2D3-223ENST00000508249 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
UBE2D3-223ENST00000508249 ARHGEF12Q9NZN5 1544 aa15.83■□□□□ 0.12
UBE2D3-223ENST00000508249 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
UBE2D3-223ENST00000508249 ARID4BQ4LE39 1312 aaPredicted RBP15.81■□□□□ 0.12
UBE2D3-223ENST00000508249 SPATA31D1Q6ZQQ2 1576 aa15.81■□□□□ 0.12
UBE2D3-223ENST00000508249 AKNAQ7Z591 1439 aa15.81■□□□□ 0.12
UBE2D3-223ENST00000508249 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
UBE2D3-223ENST00000508249 SOCS7O14512 581 aa15.77■□□□□ 0.12
UBE2D3-223ENST00000508249 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
UBE2D3-223ENST00000508249 DISP3Q9P2K9 1392 aa15.75■□□□□ 0.11
UBE2D3-223ENST00000508249 POGZQ7Z3K3 1410 aa15.75■□□□□ 0.11
UBE2D3-223ENST00000508249 LTBP4Q8N2S1 1624 aa15.71■□□□□ 0.11
UBE2D3-223ENST00000508249 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms