RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 RUSC2Q8N2Y8 1516 aa31.94■■■□□ 2.7
CLDND1-217ENST00000508071 NPM1P06748 294 aaKnown RBP eCLIP31.85■■■□□ 2.69
CLDND1-217ENST00000508071 FAM69CQ0P6D2 419 aa31.8■■■□□ 2.68
CLDND1-217ENST00000508071 ABCC10Q5T3U5 1492 aa31.78■■■□□ 2.68
CLDND1-217ENST00000508071 MAPKBP1O60336 1514 aa31.76■■■□□ 2.68
CLDND1-217ENST00000508071 ADCY10Q96PN6 1610 aa31.74■■■□□ 2.67
CLDND1-217ENST00000508071 KIAA0586Q9BVV6 1533 aa31.74■■■□□ 2.67
CLDND1-217ENST00000508071 IGF1RP08069 1367 aa31.72■■■□□ 2.67
CLDND1-217ENST00000508071 CUL7Q14999 1698 aa31.71■■■□□ 2.67
CLDND1-217ENST00000508071 KIF27Q86VH2 1401 aa31.71■■■□□ 2.67
CLDND1-217ENST00000508071 DIP2BQ9P265 1576 aa31.7■■■□□ 2.67
CLDND1-217ENST00000508071 TSPOAP1O95153 1857 aa31.55■■■□□ 2.64
CLDND1-217ENST00000508071 KDM6BO15054 1643 aa31.53■■■□□ 2.64
CLDND1-217ENST00000508071 PTPRGP23470 1445 aa31.53■■■□□ 2.64
CLDND1-217ENST00000508071 CARMIL1Q5VZK9 1371 aa31.52■■■□□ 2.64
CLDND1-217ENST00000508071 TTBK1Q5TCY1 1321 aaPredicted RBP31.49■■■□□ 2.63
CLDND1-217ENST00000508071 CARMIL2Q6F5E8 1435 aa31.47■■■□□ 2.63
CLDND1-217ENST00000508071 TNIKQ9UKE5 1360 aa31.44■■■□□ 2.62
CLDND1-217ENST00000508071 ABCC2Q92887 1545 aa31.4■■■□□ 2.62
CLDND1-217ENST00000508071 IQGAP2Q13576 1575 aa31.4■■■□□ 2.62
CLDND1-217ENST00000508071 KDM4FA0A1W2PPD8 638 aa31.34■■■□□ 2.61
CLDND1-217ENST00000508071 PLB1Q6P1J6 1458 aa31.33■■■□□ 2.61
CLDND1-217ENST00000508071 ASXL2Q76L83 1435 aa31.32■■■□□ 2.61
CLDND1-217ENST00000508071 UHRF1BP1LA0JNW5 1464 aa31.29■■■□□ 2.6
CLDND1-217ENST00000508071 GLI2P10070 1586 aa31.28■■■□□ 2.6
CLDND1-217ENST00000508071 UACAQ9BZF9 1416 aa31.27■■■□□ 2.6
CLDND1-217ENST00000508071 DISP1Q96F81 1524 aa31.25■■■□□ 2.59
CLDND1-217ENST00000508071 PPRC1Q5VV67 1664 aaKnown RBP31.24■■■□□ 2.59
CLDND1-217ENST00000508071 RAPGEF2Q9Y4G8 1499 aa31.2■■■□□ 2.58
CLDND1-217ENST00000508071 UGGT2Q9NYU1 1516 aa31.17■■■□□ 2.58
CLDND1-217ENST00000508071 KDM5BQ9UGL1 1544 aa31.15■■■□□ 2.58
CLDND1-217ENST00000508071 EPRSP07814 1512 aaKnown RBP31.14■■■□□ 2.57
CLDND1-217ENST00000508071 KIAA0556O60303 1618 aa31.11■■■□□ 2.57
CLDND1-217ENST00000508071 ZCCHC11Q5TAX3 1644 aaKnown RBP31.11■■■□□ 2.57
CLDND1-217ENST00000508071 MAP3K4Q9Y6R4 1608 aa31.09■■■□□ 2.57
CLDND1-217ENST00000508071 TEX14Q8IWB6 1497 aa31.07■■■□□ 2.56
CLDND1-217ENST00000508071 ADGRL1O94910 1474 aa31.03■■■□□ 2.56
CLDND1-217ENST00000508071 COL17A1Q9UMD9 1497 aaPredicted RBP31.02■■■□□ 2.56
CLDND1-217ENST00000508071 CTTNBP2Q8WZ74 1663 aa30.98■■■□□ 2.55
CLDND1-217ENST00000508071 WDR7Q9Y4E6 1490 aa30.97■■■□□ 2.55
CLDND1-217ENST00000508071 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
CLDND1-217ENST00000508071 ABCA8O94911 1581 aa30.84■■■□□ 2.53
CLDND1-217ENST00000508071 CD109Q6YHK3 1445 aa30.83■■■□□ 2.53
CLDND1-217ENST00000508071 CFAP43Q8NDM7 1665 aa30.83■■■□□ 2.53
CLDND1-217ENST00000508071 KCNH8Q96L42 1107 aa30.82■■■□□ 2.52
CLDND1-217ENST00000508071 MAGI3Q5TCQ9 1506 aa30.8■■■□□ 2.52
CLDND1-217ENST00000508071 ILDR1Q86SU0 546 aaPredicted RBP30.76■■■□□ 2.51
CLDND1-217ENST00000508071 PRXQ9BXM0 1461 aa30.76■■■□□ 2.51
CLDND1-217ENST00000508071 HECW2Q9P2P5 1572 aa30.72■■■□□ 2.51
CLDND1-217ENST00000508071 FAM9AQ8IZU1 332 aaPredicted RBP30.71■■■□□ 2.51
CLDND1-217ENST00000508071 ARID3CA6NKF2 412 aa30.62■■■□□ 2.49
CLDND1-217ENST00000508071 P3H3Q8IVL6 736 aa30.61■■■□□ 2.49
CLDND1-217ENST00000508071 ATP10BO94823 1461 aa30.58■■■□□ 2.49
CLDND1-217ENST00000508071 KIF21BO75037 1637 aa30.58■■■□□ 2.49
CLDND1-217ENST00000508071 ARAP3Q8WWN8 1544 aa30.57■■■□□ 2.49
CLDND1-217ENST00000508071 ABCA9Q8IUA7 1624 aa30.51■■■□□ 2.48
CLDND1-217ENST00000508071 PHLDB1Q86UU1 1377 aa30.5■■■□□ 2.47
CLDND1-217ENST00000508071 SAMD9Q5K651 1589 aa30.49■■■□□ 2.47
CLDND1-217ENST00000508071 RAPGEF6Q8TEU7 1601 aa30.47■■■□□ 2.47
CLDND1-217ENST00000508071 CSRNP3Q8WYN3 585 aa30.46■■■□□ 2.47
CLDND1-217ENST00000508071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
CLDND1-217ENST00000508071 HNRNPUL2Q1KMD3 747 aaKnown RBP30.43■■■□□ 2.46
CLDND1-217ENST00000508071 NEO1Q92859 1461 aa30.4■■■□□ 2.46
CLDND1-217ENST00000508071 RAPGEF3O95398 923 aa30.39■■■□□ 2.46
CLDND1-217ENST00000508071 ADAMTSL3P82987 1691 aa30.35■■■□□ 2.45
CLDND1-217ENST00000508071 NUP153P49790 1475 aaKnown RBP30.33■■■□□ 2.45
CLDND1-217ENST00000508071 PTPRMP28827 1452 aa30.32■■■□□ 2.44
CLDND1-217ENST00000508071 RANGAP1P46060 587 aaPredicted RBP30.32■■■□□ 2.44
CLDND1-217ENST00000508071 FRMPD1Q5SYB0 1578 aa30.28■■■□□ 2.44
CLDND1-217ENST00000508071 FHOD3Q2V2M9 1422 aa30.28■■■□□ 2.44
CLDND1-217ENST00000508071 ARID4BQ4LE39 1312 aaPredicted RBP30.27■■■□□ 2.44
CLDND1-217ENST00000508071 EEA1Q15075 1411 aa30.27■■■□□ 2.44
CLDND1-217ENST00000508071 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
CLDND1-217ENST00000508071 PLEKHD1A6NEE1 506 aa30.24■■■□□ 2.43
CLDND1-217ENST00000508071 MADDQ8WXG6 1647 aa30.2■■■□□ 2.43
CLDND1-217ENST00000508071 DENND4BO75064 1496 aaPredicted RBP30.19■■■□□ 2.42
CLDND1-217ENST00000508071 ARHGEF40Q8TER5 1519 aa30.18■■■□□ 2.42
CLDND1-217ENST00000508071 CFAP74Q9C0B2 1584 aa30.17■■■□□ 2.42
CLDND1-217ENST00000508071 RICTORQ6R327 1708 aa30.16■■■□□ 2.42
CLDND1-217ENST00000508071 AKNAQ7Z591 1439 aa30.16■■■□□ 2.42
CLDND1-217ENST00000508071 FANCAO15360 1455 aa30.14■■■□□ 2.42
CLDND1-217ENST00000508071 EFCAB5A4FU69 1503 aa30.13■■■□□ 2.41
CLDND1-217ENST00000508071 FBXO41Q8TF61 875 aa30.13■■■□□ 2.41
CLDND1-217ENST00000508071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
CLDND1-217ENST00000508071 PCF11O94913 1555 aaKnown RBP30.11■■■□□ 2.41
CLDND1-217ENST00000508071 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
CLDND1-217ENST00000508071 TTC37Q6PGP7 1564 aa30.08■■■□□ 2.41
CLDND1-217ENST00000508071 LMTK3Q96Q04 1460 aa30.06■■■□□ 2.4
CLDND1-217ENST00000508071 POGZQ7Z3K3 1410 aa30.05■■■□□ 2.4
CLDND1-217ENST00000508071 ZMYM4Q5VZL5 1548 aa30.04■■■□□ 2.4
CLDND1-217ENST00000508071 ZFYVE16Q7Z3T8 1539 aa30.02■■■□□ 2.4
CLDND1-217ENST00000508071 CDK13Q14004 1512 aaKnown RBP30.01■■■□□ 2.39
CLDND1-217ENST00000508071 MAGI2Q86UL8 1455 aa29.99■■■□□ 2.39
CLDND1-217ENST00000508071 YEATS2Q9ULM3 1422 aa29.97■■■□□ 2.39
CLDND1-217ENST00000508071 PLPPR3Q6T4P5 718 aa29.97■■■□□ 2.39
CLDND1-217ENST00000508071 HECW1Q76N89 1606 aa29.95■■■□□ 2.38
CLDND1-217ENST00000508071 SIGLEC1Q9BZZ2 1709 aa29.94■■■□□ 2.38
CLDND1-217ENST00000508071 PLCH2O75038 1416 aa29.94■■■□□ 2.38
CLDND1-217ENST00000508071 SCAPERQ9BY12 1400 aa29.93■■■□□ 2.38
CLDND1-217ENST00000508071 ATP1B4Q9UN42 357 aaPredicted RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms