RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 RUSC2Q8N2Y8 1516 aa36.05■■■■□ 3.36
CLDND1-216ENST00000507944 CUL7Q14999 1698 aa36.03■■■■□ 3.36
CLDND1-216ENST00000507944 KIAA0586Q9BVV6 1533 aa35.95■■■■□ 3.35
CLDND1-216ENST00000507944 CARMIL1Q5VZK9 1371 aa35.94■■■■□ 3.34
CLDND1-216ENST00000507944 NPM1P06748 294 aaKnown RBP eCLIP35.72■■■■□ 3.31
CLDND1-216ENST00000507944 ADCY10Q96PN6 1610 aa35.63■■■■□ 3.29
CLDND1-216ENST00000507944 RAPGEF2Q9Y4G8 1499 aa35.62■■■■□ 3.29
CLDND1-216ENST00000507944 IQGAP2Q13576 1575 aa35.61■■■■□ 3.29
CLDND1-216ENST00000507944 PTPRGP23470 1445 aa35.61■■■■□ 3.29
CLDND1-216ENST00000507944 CARMIL2Q6F5E8 1435 aa35.61■■■■□ 3.29
CLDND1-216ENST00000507944 KIF13AQ9H1H9 1805 aa35.61■■■■□ 3.29
CLDND1-216ENST00000507944 TTBK1Q5TCY1 1321 aaPredicted RBP35.57■■■■□ 3.28
CLDND1-216ENST00000507944 TNIKQ9UKE5 1360 aa35.55■■■■□ 3.28
CLDND1-216ENST00000507944 MAPKBP1O60336 1514 aa35.55■■■■□ 3.28
CLDND1-216ENST00000507944 FAM69CQ0P6D2 419 aa35.53■■■■□ 3.28
CLDND1-216ENST00000507944 ABCC10Q5T3U5 1492 aa35.52■■■■□ 3.28
CLDND1-216ENST00000507944 DISP1Q96F81 1524 aa35.44■■■■□ 3.26
CLDND1-216ENST00000507944 UGGT2Q9NYU1 1516 aa35.41■■■■□ 3.26
CLDND1-216ENST00000507944 DIP2BQ9P265 1576 aa35.4■■■■□ 3.26
CLDND1-216ENST00000507944 ABCC2Q92887 1545 aa35.35■■■■□ 3.25
CLDND1-216ENST00000507944 UACAQ9BZF9 1416 aa35.32■■■■□ 3.25
CLDND1-216ENST00000507944 UHRF1BP1LA0JNW5 1464 aa35.31■■■■□ 3.24
CLDND1-216ENST00000507944 PRXQ9BXM0 1461 aa35.29■■■■□ 3.24
CLDND1-216ENST00000507944 KIAA0556O60303 1618 aa35.28■■■■□ 3.24
CLDND1-216ENST00000507944 CTTNBP2Q8WZ74 1663 aa35.27■■■■□ 3.24
CLDND1-216ENST00000507944 ASXL2Q76L83 1435 aa35.22■■■■□ 3.23
CLDND1-216ENST00000507944 TSPOAP1O95153 1857 aa35.2■■■■□ 3.23
CLDND1-216ENST00000507944 AEBP2Q6ZN18 517 aaPredicted RBP35.2■■■■□ 3.23
CLDND1-216ENST00000507944 PLB1Q6P1J6 1458 aa35.2■■■■□ 3.23
CLDND1-216ENST00000507944 GOLGA3Q08378 1498 aa35.16■■■■□ 3.22
CLDND1-216ENST00000507944 CSRNP3Q8WYN3 585 aa35.15■■■■□ 3.22
CLDND1-216ENST00000507944 KDM5BQ9UGL1 1544 aa35.15■■■■□ 3.22
CLDND1-216ENST00000507944 GLI2P10070 1586 aa35.07■■■■□ 3.2
CLDND1-216ENST00000507944 ZCCHC11Q5TAX3 1644 aaKnown RBP35.06■■■■□ 3.2
CLDND1-216ENST00000507944 KDM6BO15054 1643 aa35.04■■■■□ 3.2
CLDND1-216ENST00000507944 EPRSP07814 1512 aaKnown RBP35■■■■□ 3.19
CLDND1-216ENST00000507944 EEA1Q15075 1411 aa34.98■■■■□ 3.19
CLDND1-216ENST00000507944 ABCA8O94911 1581 aa34.96■■■■□ 3.19
CLDND1-216ENST00000507944 PPRC1Q5VV67 1664 aaKnown RBP34.94■■■■□ 3.18
CLDND1-216ENST00000507944 P3H3Q8IVL6 736 aa34.93■■■■□ 3.18
CLDND1-216ENST00000507944 FAM9AQ8IZU1 332 aaPredicted RBP34.92■■■■□ 3.18
CLDND1-216ENST00000507944 WDR7Q9Y4E6 1490 aa34.9■■■■□ 3.18
CLDND1-216ENST00000507944 MAP3K4Q9Y6R4 1608 aa34.87■■■■□ 3.17
CLDND1-216ENST00000507944 KCNH8Q96L42 1107 aa34.81■■■■□ 3.16
CLDND1-216ENST00000507944 TEX14Q8IWB6 1497 aa34.78■■■■□ 3.16
CLDND1-216ENST00000507944 SAMD9Q5K651 1589 aa34.78■■■■□ 3.16
CLDND1-216ENST00000507944 ARID3CA6NKF2 412 aa34.75■■■■□ 3.15
CLDND1-216ENST00000507944 RANGAP1P46060 587 aaPredicted RBP34.74■■■■□ 3.15
CLDND1-216ENST00000507944 COL17A1Q9UMD9 1497 aaPredicted RBP34.72■■■■□ 3.15
CLDND1-216ENST00000507944 ATP10BO94823 1461 aa34.71■■■■□ 3.15
CLDND1-216ENST00000507944 CHIC1Q5VXU3 224 aa34.7■■■■□ 3.15
CLDND1-216ENST00000507944 CD109Q6YHK3 1445 aa34.69■■■■□ 3.14
CLDND1-216ENST00000507944 KDM4FA0A1W2PPD8 638 aa34.66■■■■□ 3.14
CLDND1-216ENST00000507944 CFAP43Q8NDM7 1665 aa34.66■■■■□ 3.14
CLDND1-216ENST00000507944 KIF21BO75037 1637 aa34.66■■■■□ 3.14
CLDND1-216ENST00000507944 MAGI3Q5TCQ9 1506 aa34.63■■■■□ 3.13
CLDND1-216ENST00000507944 RAPGEF6Q8TEU7 1601 aa34.62■■■■□ 3.13
CLDND1-216ENST00000507944 FHOD3Q2V2M9 1422 aa34.6■■■■□ 3.13
CLDND1-216ENST00000507944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.56■■■■□ 3.12
CLDND1-216ENST00000507944 HNRNPUL2Q1KMD3 747 aaKnown RBP34.56■■■■□ 3.12
CLDND1-216ENST00000507944 EHMT2Q96KQ7 1210 aa34.51■■■■□ 3.12
CLDND1-216ENST00000507944 NUP153P49790 1475 aaKnown RBP34.51■■■■□ 3.11
CLDND1-216ENST00000507944 UBTFP17480 764 aaKnown RBP34.5■■■■□ 3.11
CLDND1-216ENST00000507944 EFCAB5A4FU69 1503 aa34.49■■■■□ 3.11
CLDND1-216ENST00000507944 ABCA9Q8IUA7 1624 aa34.44■■■■□ 3.1
CLDND1-216ENST00000507944 PLEKHD1A6NEE1 506 aa34.39■■■■□ 3.1
CLDND1-216ENST00000507944 ADGRL1O94910 1474 aa34.39■■■■□ 3.1
CLDND1-216ENST00000507944 ARAP3Q8WWN8 1544 aa34.36■■■■□ 3.09
CLDND1-216ENST00000507944 PHLDB1Q86UU1 1377 aa34.35■■■■□ 3.09
CLDND1-216ENST00000507944 NEO1Q92859 1461 aa34.26■■■■□ 3.07
CLDND1-216ENST00000507944 ARHGAP35Q9NRY4 1499 aa34.24■■■■□ 3.07
CLDND1-216ENST00000507944 FMN1Q68DA7 1419 aa34.21■■■■□ 3.07
CLDND1-216ENST00000507944 RAPGEF3O95398 923 aa34.21■■■■□ 3.07
CLDND1-216ENST00000507944 ATP1B4Q9UN42 357 aaPredicted RBP34.21■■■■□ 3.07
CLDND1-216ENST00000507944 CDK13Q14004 1512 aaKnown RBP34.19■■■■□ 3.06
CLDND1-216ENST00000507944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.14■■■■□ 3.06
CLDND1-216ENST00000507944 HECW1Q76N89 1606 aa34.11■■■■□ 3.05
CLDND1-216ENST00000507944 FANCAO15360 1455 aa34.07■■■■□ 3.05
CLDND1-216ENST00000507944 TTC37Q6PGP7 1564 aa34.07■■■■□ 3.05
CLDND1-216ENST00000507944 AKNAQ7Z591 1439 aa34.07■■■■□ 3.04
CLDND1-216ENST00000507944 CDK11AQ9UQ88 783 aaPredicted RBP34.06■■■■□ 3.04
CLDND1-216ENST00000507944 FRMPD1Q5SYB0 1578 aa34.04■■■■□ 3.04
CLDND1-216ENST00000507944 DENND4BO75064 1496 aaPredicted RBP34.03■■■■□ 3.04
CLDND1-216ENST00000507944 CFAP74Q9C0B2 1584 aa34.02■■■■□ 3.04
CLDND1-216ENST00000507944 PLCH2O75038 1416 aa33.97■■■■□ 3.03
CLDND1-216ENST00000507944 RICTORQ6R327 1708 aa33.96■■■■□ 3.03
CLDND1-216ENST00000507944 TROQ12816 1431 aaPredicted RBP33.91■■■■□ 3.02
CLDND1-216ENST00000507944 ARID4BQ4LE39 1312 aaPredicted RBP33.91■■■■□ 3.02
CLDND1-216ENST00000507944 LRRIQ1Q96JM4 1722 aa33.9■■■■□ 3.02
CLDND1-216ENST00000507944 EFCAB2Q5VUJ9 269 aa33.88■■■■□ 3.01
CLDND1-216ENST00000507944 CASKIN1Q8WXD9 1431 aa33.87■■■■□ 3.01
CLDND1-216ENST00000507944 CLIP1P30622 1438 aa33.87■■■■□ 3.01
CLDND1-216ENST00000507944 SCAPERQ9BY12 1400 aa33.87■■■■□ 3.01
CLDND1-216ENST00000507944 KIF14Q15058 1648 aa33.86■■■■□ 3.01
CLDND1-216ENST00000507944 ARHGEF40Q8TER5 1519 aa33.85■■■■□ 3.01
CLDND1-216ENST00000507944 MYO5CQ9NQX4 1742 aa33.85■■■■□ 3.01
CLDND1-216ENST00000507944 ADAMTSL3P82987 1691 aa33.85■■■■□ 3.01
CLDND1-216ENST00000507944 HECW2Q9P2P5 1572 aa33.83■■■■□ 3.01
CLDND1-216ENST00000507944 PCF11O94913 1555 aaKnown RBP33.82■■■■□ 3
CLDND1-216ENST00000507944 ZMYM4Q5VZL5 1548 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms