RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 AEBP2Q6ZN18 517 aaPredicted RBP40.79■■■■■ 4.12
CALCOCO2-209ENST00000507076 CUL7Q14999 1698 aa40.62■■■■■ 4.09
CALCOCO2-209ENST00000507076 ADCY10Q96PN6 1610 aa40.58■■■■■ 4.09
CALCOCO2-209ENST00000507076 KIF27Q86VH2 1401 aa40.56■■■■■ 4.08
CALCOCO2-209ENST00000507076 IGF1RP08069 1367 aa40.55■■■■■ 4.08
CALCOCO2-209ENST00000507076 KIAA0586Q9BVV6 1533 aa40.54■■■■■ 4.08
CALCOCO2-209ENST00000507076 MAPKBP1O60336 1514 aa40.5■■■■■ 4.07
CALCOCO2-209ENST00000507076 ABCC10Q5T3U5 1492 aa40.48■■■■■ 4.07
CALCOCO2-209ENST00000507076 NPM1P06748 294 aaKnown RBP eCLIP40.46■■■■■ 4.07
CALCOCO2-209ENST00000507076 DIP2BQ9P265 1576 aa40.46■■■■■ 4.07
CALCOCO2-209ENST00000507076 FAM69CQ0P6D2 419 aa40.43■■■■■ 4.06
CALCOCO2-209ENST00000507076 TSPOAP1O95153 1857 aa40.32■■■■■ 4.04
CALCOCO2-209ENST00000507076 CARMIL1Q5VZK9 1371 aa40.29■■■■■ 4.04
CALCOCO2-209ENST00000507076 TTBK1Q5TCY1 1321 aaPredicted RBP40.21■■■■■ 4.03
CALCOCO2-209ENST00000507076 PTPRGP23470 1445 aa40.21■■■■■ 4.03
CALCOCO2-209ENST00000507076 IQGAP2Q13576 1575 aa40.2■■■■■ 4.03
CALCOCO2-209ENST00000507076 KDM6BO15054 1643 aa40.2■■■■■ 4.03
CALCOCO2-209ENST00000507076 CARMIL2Q6F5E8 1435 aa40.14■■■■■ 4.02
CALCOCO2-209ENST00000507076 TNIKQ9UKE5 1360 aa40.11■■■■■ 4.01
CALCOCO2-209ENST00000507076 ABCC2Q92887 1545 aa40.06■■■■■ 4
CALCOCO2-209ENST00000507076 DISP1Q96F81 1524 aa39.99■■■■□ 3.99
CALCOCO2-209ENST00000507076 ASXL2Q76L83 1435 aa39.96■■■■□ 3.99
CALCOCO2-209ENST00000507076 PPRC1Q5VV67 1664 aaKnown RBP39.94■■■■□ 3.98
CALCOCO2-209ENST00000507076 UHRF1BP1LA0JNW5 1464 aa39.94■■■■□ 3.98
CALCOCO2-209ENST00000507076 RAPGEF2Q9Y4G8 1499 aa39.93■■■■□ 3.98
CALCOCO2-209ENST00000507076 PLB1Q6P1J6 1458 aa39.91■■■■□ 3.98
CALCOCO2-209ENST00000507076 UACAQ9BZF9 1416 aa39.91■■■■□ 3.98
CALCOCO2-209ENST00000507076 GLI2P10070 1586 aa39.89■■■■□ 3.98
CALCOCO2-209ENST00000507076 UGGT2Q9NYU1 1516 aa39.89■■■■□ 3.98
CALCOCO2-209ENST00000507076 KIAA0556O60303 1618 aa39.85■■■■□ 3.97
CALCOCO2-209ENST00000507076 ZCCHC11Q5TAX3 1644 aaKnown RBP39.81■■■■□ 3.96
CALCOCO2-209ENST00000507076 CTTNBP2Q8WZ74 1663 aa39.8■■■■□ 3.96
CALCOCO2-209ENST00000507076 KDM4FA0A1W2PPD8 638 aa39.79■■■■□ 3.96
CALCOCO2-209ENST00000507076 KDM5BQ9UGL1 1544 aa39.78■■■■□ 3.96
CALCOCO2-209ENST00000507076 MAP3K4Q9Y6R4 1608 aa39.74■■■■□ 3.95
CALCOCO2-209ENST00000507076 EPRSP07814 1512 aaKnown RBP39.72■■■■□ 3.95
CALCOCO2-209ENST00000507076 COL17A1Q9UMD9 1497 aaPredicted RBP39.58■■■■□ 3.93
CALCOCO2-209ENST00000507076 TEX14Q8IWB6 1497 aa39.56■■■■□ 3.92
CALCOCO2-209ENST00000507076 WDR7Q9Y4E6 1490 aa39.54■■■■□ 3.92
CALCOCO2-209ENST00000507076 GOLGA3Q08378 1498 aa39.5■■■■□ 3.91
CALCOCO2-209ENST00000507076 ADGRL1O94910 1474 aa39.49■■■■□ 3.91
CALCOCO2-209ENST00000507076 ABCA8O94911 1581 aa39.48■■■■□ 3.91
CALCOCO2-209ENST00000507076 PRXQ9BXM0 1461 aa39.43■■■■□ 3.9
CALCOCO2-209ENST00000507076 CFAP43Q8NDM7 1665 aa39.41■■■■□ 3.9
CALCOCO2-209ENST00000507076 CD109Q6YHK3 1445 aa39.3■■■■□ 3.88
CALCOCO2-209ENST00000507076 KCNH8Q96L42 1107 aa39.29■■■■□ 3.88
CALCOCO2-209ENST00000507076 MAGI3Q5TCQ9 1506 aa39.28■■■■□ 3.88
CALCOCO2-209ENST00000507076 ARID3CA6NKF2 412 aa39.17■■■■□ 3.86
CALCOCO2-209ENST00000507076 P3H3Q8IVL6 736 aa39.17■■■■□ 3.86
CALCOCO2-209ENST00000507076 SAMD9Q5K651 1589 aa39.12■■■■□ 3.85
CALCOCO2-209ENST00000507076 ATP10BO94823 1461 aa39.1■■■■□ 3.85
CALCOCO2-209ENST00000507076 KIF21BO75037 1637 aa39.09■■■■□ 3.85
CALCOCO2-209ENST00000507076 HECW2Q9P2P5 1572 aa39.08■■■■□ 3.85
CALCOCO2-209ENST00000507076 RAPGEF6Q8TEU7 1601 aa39.04■■■■□ 3.84
CALCOCO2-209ENST00000507076 FAM9AQ8IZU1 332 aaPredicted RBP39.04■■■■□ 3.84
CALCOCO2-209ENST00000507076 ABCA9Q8IUA7 1624 aa39.03■■■■□ 3.84
CALCOCO2-209ENST00000507076 CSRNP3Q8WYN3 585 aa39.01■■■■□ 3.84
CALCOCO2-209ENST00000507076 ARAP3Q8WWN8 1544 aa38.98■■■■□ 3.83
CALCOCO2-209ENST00000507076 ILDR1Q86SU0 546 aaPredicted RBP38.87■■■■□ 3.81
CALCOCO2-209ENST00000507076 RANGAP1P46060 587 aaPredicted RBP38.85■■■■□ 3.81
CALCOCO2-209ENST00000507076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.84■■■■□ 3.81
CALCOCO2-209ENST00000507076 HNRNPUL2Q1KMD3 747 aaKnown RBP38.84■■■■□ 3.81
CALCOCO2-209ENST00000507076 NUP153P49790 1475 aaKnown RBP38.84■■■■□ 3.81
CALCOCO2-209ENST00000507076 EEA1Q15075 1411 aa38.81■■■■□ 3.8
CALCOCO2-209ENST00000507076 FHOD3Q2V2M9 1422 aa38.81■■■■□ 3.8
CALCOCO2-209ENST00000507076 PHLDB1Q86UU1 1377 aa38.79■■■■□ 3.8
CALCOCO2-209ENST00000507076 NEO1Q92859 1461 aa38.77■■■■□ 3.8
CALCOCO2-209ENST00000507076 FRMPD1Q5SYB0 1578 aa38.76■■■■□ 3.8
CALCOCO2-209ENST00000507076 RAPGEF3O95398 923 aa38.74■■■■□ 3.79
CALCOCO2-209ENST00000507076 ADAMTSL3P82987 1691 aa38.72■■■■□ 3.79
CALCOCO2-209ENST00000507076 BCORL1Q5H9F3 1711 aa38.63■■■■□ 3.77
CALCOCO2-209ENST00000507076 EFCAB5A4FU69 1503 aa38.63■■■■□ 3.77
CALCOCO2-209ENST00000507076 RICTORQ6R327 1708 aa38.6■■■■□ 3.77
CALCOCO2-209ENST00000507076 PTPRMP28827 1452 aa38.6■■■■□ 3.77
CALCOCO2-209ENST00000507076 PLEKHD1A6NEE1 506 aa38.57■■■■□ 3.76
CALCOCO2-209ENST00000507076 CFAP74Q9C0B2 1584 aa38.57■■■■□ 3.76
CALCOCO2-209ENST00000507076 MADDQ8WXG6 1647 aa38.56■■■■□ 3.76
CALCOCO2-209ENST00000507076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.56■■■■□ 3.76
CALCOCO2-209ENST00000507076 TTC37Q6PGP7 1564 aa38.56■■■■□ 3.76
CALCOCO2-209ENST00000507076 ARHGEF40Q8TER5 1519 aa38.55■■■■□ 3.76
CALCOCO2-209ENST00000507076 ARID4BQ4LE39 1312 aaPredicted RBP38.51■■■■□ 3.76
CALCOCO2-209ENST00000507076 FANCAO15360 1455 aa38.51■■■■□ 3.76
CALCOCO2-209ENST00000507076 DENND4BO75064 1496 aaPredicted RBP38.51■■■■□ 3.76
CALCOCO2-209ENST00000507076 CDK13Q14004 1512 aaKnown RBP38.49■■■■□ 3.75
CALCOCO2-209ENST00000507076 AKNAQ7Z591 1439 aa38.49■■■■□ 3.75
CALCOCO2-209ENST00000507076 RIMS1Q86UR5 1692 aaKnown RBP38.46■■■■□ 3.75
CALCOCO2-209ENST00000507076 EHMT2Q96KQ7 1210 aa38.39■■■■□ 3.74
CALCOCO2-209ENST00000507076 ZMYM4Q5VZL5 1548 aa38.38■■■■□ 3.74
CALCOCO2-209ENST00000507076 SIGLEC1Q9BZZ2 1709 aa38.38■■■■□ 3.73
CALCOCO2-209ENST00000507076 PCF11O94913 1555 aaKnown RBP38.35■■■■□ 3.73
CALCOCO2-209ENST00000507076 ZFYVE16Q7Z3T8 1539 aa38.34■■■■□ 3.73
CALCOCO2-209ENST00000507076 HECW1Q76N89 1606 aa38.32■■■■□ 3.73
CALCOCO2-209ENST00000507076 YEATS2Q9ULM3 1422 aa38.3■■■■□ 3.72
CALCOCO2-209ENST00000507076 MYO5CQ9NQX4 1742 aa38.29■■■■□ 3.72
CALCOCO2-209ENST00000507076 LMTK3Q96Q04 1460 aa38.28■■■■□ 3.72
CALCOCO2-209ENST00000507076 UBTFP17480 764 aaKnown RBP38.28■■■■□ 3.72
CALCOCO2-209ENST00000507076 ARHGAP35Q9NRY4 1499 aa38.25■■■■□ 3.71
CALCOCO2-209ENST00000507076 ATP1B4Q9UN42 357 aaPredicted RBP38.25■■■■□ 3.71
CALCOCO2-209ENST00000507076 PLCH2O75038 1416 aa38.23■■■■□ 3.71
CALCOCO2-209ENST00000507076 FMN1Q68DA7 1419 aa38.23■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms