RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 JPH4Q96JJ6 628 aa38.37■■■■□ 3.73
HMGB2-204ENST00000506267 KIAA0586Q9BVV6 1533 aa38.34■■■■□ 3.73
HMGB2-204ENST00000506267 PRG4Q92954 1404 aaPredicted RBP38.32■■■■□ 3.73
HMGB2-204ENST00000506267 RAPGEF2Q9Y4G8 1499 aa38.22■■■■□ 3.71
HMGB2-204ENST00000506267 PRXQ9BXM0 1461 aa38.08■■■■□ 3.69
HMGB2-204ENST00000506267 IQGAP2Q13576 1575 aa38.06■■■■□ 3.68
HMGB2-204ENST00000506267 CHIC1Q5VXU3 224 aa37.95■■■■□ 3.67
HMGB2-204ENST00000506267 TRHP20396 242 aaPredicted RBP37.92■■■■□ 3.66
HMGB2-204ENST00000506267 CSRNP3Q8WYN3 585 aa37.92■■■■□ 3.66
HMGB2-204ENST00000506267 EEA1Q15075 1411 aa37.89■■■■□ 3.66
HMGB2-204ENST00000506267 UGGT2Q9NYU1 1516 aa37.89■■■■□ 3.66
HMGB2-204ENST00000506267 CARMIL2Q6F5E8 1435 aa37.87■■■■□ 3.65
HMGB2-204ENST00000506267 DISP1Q96F81 1524 aa37.87■■■■□ 3.65
HMGB2-204ENST00000506267 CTTNBP2Q8WZ74 1663 aa37.86■■■■□ 3.65
HMGB2-204ENST00000506267 TNIKQ9UKE5 1360 aa37.81■■■■□ 3.64
HMGB2-204ENST00000506267 PTPRGP23470 1445 aa37.81■■■■□ 3.64
HMGB2-204ENST00000506267 ADCY10Q96PN6 1610 aa37.8■■■■□ 3.64
HMGB2-204ENST00000506267 KIAA0556O60303 1618 aa37.72■■■■□ 3.63
HMGB2-204ENST00000506267 FAM9AQ8IZU1 332 aaPredicted RBP37.7■■■■□ 3.63
HMGB2-204ENST00000506267 TTBK1Q5TCY1 1321 aaPredicted RBP37.66■■■■□ 3.62
HMGB2-204ENST00000506267 NPM1P06748 294 aaKnown RBP eCLIP37.61■■■■□ 3.61
HMGB2-204ENST00000506267 MAPKBP1O60336 1514 aa37.6■■■■□ 3.61
HMGB2-204ENST00000506267 GOLGA3Q08378 1498 aa37.58■■■■□ 3.61
HMGB2-204ENST00000506267 UHRF1BP1LA0JNW5 1464 aa37.58■■■■□ 3.61
HMGB2-204ENST00000506267 UACAQ9BZF9 1416 aa37.56■■■■□ 3.6
HMGB2-204ENST00000506267 KIF21BO75037 1637 aa37.56■■■■□ 3.6
HMGB2-204ENST00000506267 ABCC2Q92887 1545 aa37.53■■■■□ 3.6
HMGB2-204ENST00000506267 KIF13AQ9H1H9 1805 aa37.53■■■■□ 3.6
HMGB2-204ENST00000506267 ABCC10Q5T3U5 1492 aa37.46■■■■□ 3.59
HMGB2-204ENST00000506267 SAMD9Q5K651 1589 aa37.41■■■■□ 3.58
HMGB2-204ENST00000506267 DIP2BQ9P265 1576 aa37.4■■■■□ 3.58
HMGB2-204ENST00000506267 KDM5BQ9UGL1 1544 aa37.4■■■■□ 3.58
HMGB2-204ENST00000506267 PLB1Q6P1J6 1458 aa37.39■■■■□ 3.58
HMGB2-204ENST00000506267 FAM69CQ0P6D2 419 aa37.36■■■■□ 3.57
HMGB2-204ENST00000506267 ABCA8O94911 1581 aa37.36■■■■□ 3.57
HMGB2-204ENST00000506267 P3H3Q8IVL6 736 aa37.34■■■■□ 3.57
HMGB2-204ENST00000506267 ASXL2Q76L83 1435 aa37.32■■■■□ 3.56
HMGB2-204ENST00000506267 ZCCHC11Q5TAX3 1644 aaKnown RBP37.3■■■■□ 3.56
HMGB2-204ENST00000506267 RANGAP1P46060 587 aaPredicted RBP37.21■■■■□ 3.55
HMGB2-204ENST00000506267 EHMT2Q96KQ7 1210 aa37.21■■■■□ 3.55
HMGB2-204ENST00000506267 UBTFP17480 764 aaKnown RBP37.17■■■■□ 3.54
HMGB2-204ENST00000506267 FHOD3Q2V2M9 1422 aa37.15■■■■□ 3.54
HMGB2-204ENST00000506267 GLI2P10070 1586 aa37.15■■■■□ 3.54
HMGB2-204ENST00000506267 EFCAB5A4FU69 1503 aa37.14■■■■□ 3.54
HMGB2-204ENST00000506267 EPRSP07814 1512 aaKnown RBP37.11■■■■□ 3.53
HMGB2-204ENST00000506267 WDR7Q9Y4E6 1490 aa37.07■■■■□ 3.53
HMGB2-204ENST00000506267 TSPOAP1O95153 1857 aa37.07■■■■□ 3.53
HMGB2-204ENST00000506267 RAPGEF6Q8TEU7 1601 aa37.07■■■■□ 3.53
HMGB2-204ENST00000506267 ATP10BO94823 1461 aa37.05■■■■□ 3.52
HMGB2-204ENST00000506267 PPRC1Q5VV67 1664 aaKnown RBP36.99■■■■□ 3.51
HMGB2-204ENST00000506267 MAP3K4Q9Y6R4 1608 aa36.97■■■■□ 3.51
HMGB2-204ENST00000506267 NUP153P49790 1475 aaKnown RBP36.97■■■■□ 3.51
HMGB2-204ENST00000506267 ARHGAP35Q9NRY4 1499 aa36.97■■■■□ 3.51
HMGB2-204ENST00000506267 ARID3CA6NKF2 412 aa36.97■■■■□ 3.51
HMGB2-204ENST00000506267 KCNH8Q96L42 1107 aa36.87■■■■□ 3.49
HMGB2-204ENST00000506267 KDM6BO15054 1643 aa36.82■■■■□ 3.49
HMGB2-204ENST00000506267 CFAP43Q8NDM7 1665 aa36.8■■■■□ 3.48
HMGB2-204ENST00000506267 FMN1Q68DA7 1419 aa36.79■■■■□ 3.48
HMGB2-204ENST00000506267 CD109Q6YHK3 1445 aa36.76■■■■□ 3.47
HMGB2-204ENST00000506267 TEX14Q8IWB6 1497 aa36.75■■■■□ 3.47
HMGB2-204ENST00000506267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.74■■■■□ 3.47
HMGB2-204ENST00000506267 HNRNPUL2Q1KMD3 747 aaKnown RBP36.74■■■■□ 3.47
HMGB2-204ENST00000506267 MAGI3Q5TCQ9 1506 aa36.73■■■■□ 3.47
HMGB2-204ENST00000506267 ABCA9Q8IUA7 1624 aa36.69■■■■□ 3.46
HMGB2-204ENST00000506267 COL17A1Q9UMD9 1497 aaPredicted RBP36.69■■■■□ 3.46
HMGB2-204ENST00000506267 CDK13Q14004 1512 aaKnown RBP36.66■■■■□ 3.46
HMGB2-204ENST00000506267 HECW1Q76N89 1606 aa36.64■■■■□ 3.46
HMGB2-204ENST00000506267 PLEKHD1A6NEE1 506 aa36.63■■■■□ 3.45
HMGB2-204ENST00000506267 CLIP1P30622 1438 aa36.61■■■■□ 3.45
HMGB2-204ENST00000506267 ATP1B4Q9UN42 357 aaPredicted RBP36.55■■■■□ 3.44
HMGB2-204ENST00000506267 LRRIQ1Q96JM4 1722 aa36.54■■■■□ 3.44
HMGB2-204ENST00000506267 CASKIN1Q8WXD9 1431 aa36.51■■■■□ 3.44
HMGB2-204ENST00000506267 PCF11O94913 1555 aaKnown RBP36.5■■■■□ 3.43
HMGB2-204ENST00000506267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.48■■■■□ 3.436e-13■■■□□ 15.1
HMGB2-204ENST00000506267 ARAP3Q8WWN8 1544 aa36.43■■■■□ 3.42
HMGB2-204ENST00000506267 TTC37Q6PGP7 1564 aa36.42■■■■□ 3.42
HMGB2-204ENST00000506267 LOC105371045A0A1W2PR82 267 aa36.4■■■■□ 3.42
HMGB2-204ENST00000506267 PHLDB1Q86UU1 1377 aa36.4■■■■□ 3.42
HMGB2-204ENST00000506267 NEO1Q92859 1461 aa36.39■■■■□ 3.42
HMGB2-204ENST00000506267 FYCO1Q9BQS8 1478 aa36.39■■■■□ 3.42
HMGB2-204ENST00000506267 CDK11AQ9UQ88 783 aaPredicted RBP36.39■■■■□ 3.42
HMGB2-204ENST00000506267 CEP162Q5TB80 1403 aa36.39■■■■□ 3.42
HMGB2-204ENST00000506267 CCDC18Q5T9S5 1454 aa36.36■■■■□ 3.41
HMGB2-204ENST00000506267 TROQ12816 1431 aaPredicted RBP36.35■■■■□ 3.41
HMGB2-204ENST00000506267 KIF14Q15058 1648 aa36.31■■■■□ 3.4
HMGB2-204ENST00000506267 FANCAO15360 1455 aa36.26■■■■□ 3.4
HMGB2-204ENST00000506267 PLCH2O75038 1416 aa36.25■■■■□ 3.39
HMGB2-204ENST00000506267 AKNAQ7Z591 1439 aa36.23■■■■□ 3.39
HMGB2-204ENST00000506267 CFAP74Q9C0B2 1584 aa36.22■■■■□ 3.39
HMGB2-204ENST00000506267 RAPGEF3O95398 923 aa36.21■■■■□ 3.39
HMGB2-204ENST00000506267 FRMPD1Q5SYB0 1578 aa36.19■■■■□ 3.38
HMGB2-204ENST00000506267 KDM4FA0A1W2PPD8 638 aa36.19■■■■□ 3.38
HMGB2-204ENST00000506267 MYO5CQ9NQX4 1742 aa36.19■■■■□ 3.38
HMGB2-204ENST00000506267 AEBP2Q6ZN18 517 aaPredicted RBP36.16■■■■□ 3.38
HMGB2-204ENST00000506267 DENND4BO75064 1496 aaPredicted RBP36.12■■■■□ 3.37
HMGB2-204ENST00000506267 RICTORQ6R327 1708 aa36.11■■■■□ 3.37
HMGB2-204ENST00000506267 EFCAB2Q5VUJ9 269 aa36.07■■■■□ 3.36
HMGB2-204ENST00000506267 ADGRL1O94910 1474 aa36.05■■■■□ 3.36
HMGB2-204ENST00000506267 CDC42BPBQ9Y5S2 1711 aa36.05■■■■□ 3.36
HMGB2-204ENST00000506267 SCAPERQ9BY12 1400 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms