RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 NUP160Q12769 1436 aa20.41■□□□□ 0.86
PRDM2-214ENST00000505823 ARAP1Q96P48 1450 aa20.39■□□□□ 0.85
PRDM2-214ENST00000505823 IGF1RP08069 1367 aa20.36■□□□□ 0.85
PRDM2-214ENST00000505823 CUL7Q14999 1698 aa20.32■□□□□ 0.84
PRDM2-214ENST00000505823 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
PRDM2-214ENST00000505823 JPH4Q96JJ6 628 aa20.31■□□□□ 0.84
PRDM2-214ENST00000505823 MSH5O43196 834 aa20.3■□□□□ 0.84
PRDM2-214ENST00000505823 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
PRDM2-214ENST00000505823 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
PRDM2-214ENST00000505823 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
PRDM2-214ENST00000505823 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
PRDM2-214ENST00000505823 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
PRDM2-214ENST00000505823 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
PRDM2-214ENST00000505823 NPM1P06748 294 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRDM2-214ENST00000505823 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
PRDM2-214ENST00000505823 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
PRDM2-214ENST00000505823 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
PRDM2-214ENST00000505823 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
PRDM2-214ENST00000505823 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
PRDM2-214ENST00000505823 PTPRGP23470 1445 aa20.02■□□□□ 0.8
PRDM2-214ENST00000505823 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
PRDM2-214ENST00000505823 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
PRDM2-214ENST00000505823 EEA1Q15075 1411 aa20■□□□□ 0.79
PRDM2-214ENST00000505823 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
PRDM2-214ENST00000505823 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
PRDM2-214ENST00000505823 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
PRDM2-214ENST00000505823 UGGT2Q9NYU1 1516 aa19.91■□□□□ 0.78
PRDM2-214ENST00000505823 FAM69CQ0P6D2 419 aa19.86■□□□□ 0.77
PRDM2-214ENST00000505823 CTTNBP2Q8WZ74 1663 aa19.85■□□□□ 0.77
PRDM2-214ENST00000505823 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
PRDM2-214ENST00000505823 DISP1Q96F81 1524 aa19.85■□□□□ 0.77
PRDM2-214ENST00000505823 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
PRDM2-214ENST00000505823 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
PRDM2-214ENST00000505823 UHRF1BP1LA0JNW5 1464 aa19.82■□□□□ 0.76
PRDM2-214ENST00000505823 ABCC2Q92887 1545 aa19.81■□□□□ 0.76
PRDM2-214ENST00000505823 KIAA0556O60303 1618 aa19.8■□□□□ 0.76
PRDM2-214ENST00000505823 ABCC10Q5T3U5 1492 aa19.8■□□□□ 0.76
PRDM2-214ENST00000505823 PLB1Q6P1J6 1458 aa19.77■□□□□ 0.76
PRDM2-214ENST00000505823 ASXL2Q76L83 1435 aa19.7■□□□□ 0.74
PRDM2-214ENST00000505823 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
PRDM2-214ENST00000505823 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
PRDM2-214ENST00000505823 P3H3Q8IVL6 736 aa19.69■□□□□ 0.74
PRDM2-214ENST00000505823 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
PRDM2-214ENST00000505823 DIP2BQ9P265 1576 aa19.68■□□□□ 0.74
PRDM2-214ENST00000505823 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
PRDM2-214ENST00000505823 KIF21BO75037 1637 aa19.66■□□□□ 0.74
PRDM2-214ENST00000505823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
PRDM2-214ENST00000505823 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
PRDM2-214ENST00000505823 ZCCHC11Q5TAX3 1644 aaKnown RBP19.59■□□□□ 0.73
PRDM2-214ENST00000505823 ABCA8O94911 1581 aa19.59■□□□□ 0.73
PRDM2-214ENST00000505823 GLI2P10070 1586 aa19.59■□□□□ 0.73
PRDM2-214ENST00000505823 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.72
PRDM2-214ENST00000505823 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
PRDM2-214ENST00000505823 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
PRDM2-214ENST00000505823 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
PRDM2-214ENST00000505823 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
PRDM2-214ENST00000505823 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
PRDM2-214ENST00000505823 TEX14Q8IWB6 1497 aa19.55■□□□□ 0.72
PRDM2-214ENST00000505823 TSPOAP1O95153 1857 aa19.54■□□□□ 0.72
PRDM2-214ENST00000505823 ARID3CA6NKF2 412 aa19.52■□□□□ 0.72
PRDM2-214ENST00000505823 KDM6BO15054 1643 aa19.5■□□□□ 0.71
PRDM2-214ENST00000505823 FHOD3Q2V2M9 1422 aa19.5■□□□□ 0.71
PRDM2-214ENST00000505823 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
PRDM2-214ENST00000505823 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
PRDM2-214ENST00000505823 ATP10BO94823 1461 aa19.48■□□□□ 0.71
PRDM2-214ENST00000505823 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
PRDM2-214ENST00000505823 FMN1Q68DA7 1419 aa19.46■□□□□ 0.71
PRDM2-214ENST00000505823 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
PRDM2-214ENST00000505823 MAP3K4Q9Y6R4 1608 aa19.43■□□□□ 0.7
PRDM2-214ENST00000505823 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
PRDM2-214ENST00000505823 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
PRDM2-214ENST00000505823 PHLDB1Q86UU1 1377 aa19.39■□□□□ 0.69
PRDM2-214ENST00000505823 NUP153P49790 1475 aaKnown RBP19.39■□□□□ 0.69
PRDM2-214ENST00000505823 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
PRDM2-214ENST00000505823 PPRC1Q5VV67 1664 aaKnown RBP19.34■□□□□ 0.69
PRDM2-214ENST00000505823 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
PRDM2-214ENST00000505823 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
PRDM2-214ENST00000505823 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
PRDM2-214ENST00000505823 ABCA9Q8IUA7 1624 aa19.29■□□□□ 0.68
PRDM2-214ENST00000505823 NEO1Q92859 1461 aa19.26■□□□□ 0.67
PRDM2-214ENST00000505823 CLIP1P30622 1438 aa19.25■□□□□ 0.67
PRDM2-214ENST00000505823 ARAP3Q8WWN8 1544 aa19.24■□□□□ 0.67
PRDM2-214ENST00000505823 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
PRDM2-214ENST00000505823 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
PRDM2-214ENST00000505823 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
PRDM2-214ENST00000505823 CCDC18Q5T9S5 1454 aa19.2■□□□□ 0.66
PRDM2-214ENST00000505823 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
PRDM2-214ENST00000505823 CFAP74Q9C0B2 1584 aa19.17■□□□□ 0.66
PRDM2-214ENST00000505823 TROQ12816 1431 aaPredicted RBP19.16■□□□□ 0.66
PRDM2-214ENST00000505823 FANCAO15360 1455 aa19.16■□□□□ 0.66
PRDM2-214ENST00000505823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
PRDM2-214ENST00000505823 AKNAQ7Z591 1439 aa19.15■□□□□ 0.66
PRDM2-214ENST00000505823 RAPGEF3O95398 923 aa19.14■□□□□ 0.65
PRDM2-214ENST00000505823 FYCO1Q9BQS8 1478 aa19.14■□□□□ 0.65
PRDM2-214ENST00000505823 KDM4FA0A1W2PPD8 638 aa19.13■□□□□ 0.65
PRDM2-214ENST00000505823 PLCH2O75038 1416 aa19.13■□□□□ 0.65
PRDM2-214ENST00000505823 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
PRDM2-214ENST00000505823 KIF14Q15058 1648 aa19.12■□□□□ 0.65
PRDM2-214ENST00000505823 TTC37Q6PGP7 1564 aa19.08■□□□□ 0.65
PRDM2-214ENST00000505823 ADGRL1O94910 1474 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms