RNA–Protein interactions for RNA: ENST00000505237.2

PLXND1-208, Transcript of plexin D1, human

TSL 5

Gene PLXND1, Length 507 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXND1-208	ENST00000505237	RUSC2	Q8N2Y8	1516 aa		34.37	■■■■□ 3.09
PLXND1-208	ENST00000505237	CUL7	Q14999	1698 aa		34.33	■■■■□ 3.09
PLXND1-208	ENST00000505237	KIAA0586	Q9BVV6	1533 aa		34.28	■■■■□ 3.08
PLXND1-208	ENST00000505237	CARMIL1	Q5VZK9	1371 aa		34.23	■■■■□ 3.07
PLXND1-208	ENST00000505237	NPM1	P06748	294 aa	Known RBP eCLIP	34.02	■■■■□ 3.04
PLXND1-208	ENST00000505237	ADCY10	Q96PN6	1610 aa		33.97	■■■■□ 3.03
PLXND1-208	ENST00000505237	PTPRG	P23470	1445 aa		33.94	■■■■□ 3.02
PLXND1-208	ENST00000505237	CARMIL2	Q6F5E8	1435 aa		33.94	■■■■□ 3.02
PLXND1-208	ENST00000505237	IQGAP2	Q13576	1575 aa		33.94	■■■■□ 3.02
PLXND1-208	ENST00000505237	RAPGEF2	Q9Y4G8	1499 aa		33.93	■■■■□ 3.02
PLXND1-208	ENST00000505237	MAPKBP1	O60336	1514 aa		33.93	■■■■□ 3.02
PLXND1-208	ENST00000505237	TNIK	Q9UKE5	1360 aa		33.89	■■■■□ 3.02
PLXND1-208	ENST00000505237	KIF13A	Q9H1H9	1805 aa		33.89	■■■■□ 3.02
PLXND1-208	ENST00000505237	ABCC10	Q5T3U5	1492 aa		33.88	■■■■□ 3.01
PLXND1-208	ENST00000505237	FAM69C	Q0P6D2	419 aa		33.85	■■■■□ 3.01
PLXND1-208	ENST00000505237	DISP1	Q96F81	1524 aa		33.79	■■■■□ 3
PLXND1-208	ENST00000505237	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.79	■■■■□ 3
PLXND1-208	ENST00000505237	DIP2B	Q9P265	1576 aa		33.77	■■■■□ 3
PLXND1-208	ENST00000505237	UGGT2	Q9NYU1	1516 aa		33.76	■■■■□ 3
PLXND1-208	ENST00000505237	ABCC2	Q92887	1545 aa		33.72	■■■□□ 2.99
PLXND1-208	ENST00000505237	UHRF1BP1L	A0JNW5	1464 aa		33.69	■■■□□ 2.98
PLXND1-208	ENST00000505237	UACA	Q9BZF9	1416 aa		33.68	■■■□□ 2.98
PLXND1-208	ENST00000505237	PRX	Q9BXM0	1461 aa		33.65	■■■□□ 2.98
PLXND1-208	ENST00000505237	KIAA0556	O60303	1618 aa		33.61	■■■□□ 2.97
PLXND1-208	ENST00000505237	PLB1	Q6P1J6	1458 aa		33.58	■■■□□ 2.97
PLXND1-208	ENST00000505237	ASXL2	Q76L83	1435 aa		33.58	■■■□□ 2.97
PLXND1-208	ENST00000505237	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.54	■■■□□ 2.96
PLXND1-208	ENST00000505237	CTTNBP2	Q8WZ74	1663 aa		33.54	■■■□□ 2.96
PLXND1-208	ENST00000505237	KDM5B	Q9UGL1	1544 aa		33.53	■■■□□ 2.96
PLXND1-208	ENST00000505237	GOLGA3	Q08378	1498 aa		33.51	■■■□□ 2.96
PLXND1-208	ENST00000505237	GLI2	P10070	1586 aa		33.46	■■■□□ 2.95
PLXND1-208	ENST00000505237	CSRNP3	Q8WYN3	585 aa		33.44	■■■□□ 2.94
PLXND1-208	ENST00000505237	TSPOAP1	O95153	1857 aa		33.42	■■■□□ 2.94
PLXND1-208	ENST00000505237	KDM6B	O15054	1643 aa		33.4	■■■□□ 2.94
PLXND1-208	ENST00000505237	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.39	■■■□□ 2.93
PLXND1-208	ENST00000505237	EPRS	P07814	1512 aa	Known RBP	33.38	■■■□□ 2.93
PLXND1-208	ENST00000505237	EEA1	Q15075	1411 aa		33.34	■■■□□ 2.93
PLXND1-208	ENST00000505237	ABCA8	O94911	1581 aa		33.32	■■■□□ 2.92
PLXND1-208	ENST00000505237	WDR7	Q9Y4E6	1490 aa		33.28	■■■□□ 2.92
PLXND1-208	ENST00000505237	PPRC1	Q5VV67	1664 aa	Known RBP	33.28	■■■□□ 2.92
PLXND1-208	ENST00000505237	MAP3K4	Q9Y6R4	1608 aa		33.24	■■■□□ 2.91
PLXND1-208	ENST00000505237	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.23	■■■□□ 2.91
PLXND1-208	ENST00000505237	TEX14	Q8IWB6	1497 aa		33.19	■■■□□ 2.9
PLXND1-208	ENST00000505237	P3H3	Q8IVL6	736 aa		33.19	■■■□□ 2.9
PLXND1-208	ENST00000505237	SAMD9	Q5K651	1589 aa		33.15	■■■□□ 2.9
PLXND1-208	ENST00000505237	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.12	■■■□□ 2.89
PLXND1-208	ENST00000505237	KCNH8	Q96L42	1107 aa		33.1	■■■□□ 2.89
PLXND1-208	ENST00000505237	ATP10B	O94823	1461 aa		33.06	■■■□□ 2.88
PLXND1-208	ENST00000505237	CD109	Q6YHK3	1445 aa		33.06	■■■□□ 2.88
PLXND1-208	ENST00000505237	KDM4F	A0A1W2PPD8	638 aa		33.05	■■■□□ 2.88
PLXND1-208	ENST00000505237	MAGI3	Q5TCQ9	1506 aa		33.04	■■■□□ 2.88
PLXND1-208	ENST00000505237	ARID3C	A6NKF2	412 aa		33.02	■■■□□ 2.88
PLXND1-208	ENST00000505237	CFAP43	Q8NDM7	1665 aa		33.01	■■■□□ 2.88
PLXND1-208	ENST00000505237	KIF21B	O75037	1637 aa		33	■■■□□ 2.87
PLXND1-208	ENST00000505237	RANGAP1	P46060	587 aa	Predicted RBP	32.97	■■■□□ 2.87
PLXND1-208	ENST00000505237	RAPGEF6	Q8TEU7	1601 aa		32.96	■■■□□ 2.87
PLXND1-208	ENST00000505237	CHIC1	Q5VXU3	224 aa		32.96	■■■□□ 2.87
PLXND1-208	ENST00000505237	FHOD3	Q2V2M9	1422 aa		32.94	■■■□□ 2.86
PLXND1-208	ENST00000505237	NUP153	P49790	1475 aa	Known RBP	32.89	■■■□□ 2.86
PLXND1-208	ENST00000505237	EFCAB5	A4FU69	1503 aa		32.88	■■■□□ 2.85
PLXND1-208	ENST00000505237	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.85	■■■□□ 2.85
PLXND1-208	ENST00000505237	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.85	■■■□□ 2.85
PLXND1-208	ENST00000505237	ABCA9	Q8IUA7	1624 aa		32.83	■■■□□ 2.85
PLXND1-208	ENST00000505237	ADGRL1	O94910	1474 aa		32.8	■■■□□ 2.84
PLXND1-208	ENST00000505237	ARAP3	Q8WWN8	1544 aa		32.78	■■■□□ 2.84
PLXND1-208	ENST00000505237	UBTF	P17480	764 aa	Known RBP	32.78	■■■□□ 2.84
PLXND1-208	ENST00000505237	PHLDB1	Q86UU1	1377 aa		32.78	■■■□□ 2.84
PLXND1-208	ENST00000505237	PLEKHD1	A6NEE1	506 aa		32.73	■■■□□ 2.83
PLXND1-208	ENST00000505237	EHMT2	Q96KQ7	1210 aa		32.71	■■■□□ 2.83
PLXND1-208	ENST00000505237	NEO1	Q92859	1461 aa		32.68	■■■□□ 2.82
PLXND1-208	ENST00000505237	FMN1	Q68DA7	1419 aa		32.61	■■■□□ 2.81
PLXND1-208	ENST00000505237	ARHGAP35	Q9NRY4	1499 aa		32.61	■■■□□ 2.81
PLXND1-208	ENST00000505237	RAPGEF3	O95398	923 aa		32.58	■■■□□ 2.81
PLXND1-208	ENST00000505237	CDK13	Q14004	1512 aa	Known RBP	32.55	■■■□□ 2.8
PLXND1-208	ENST00000505237	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
PLXND1-208	ENST00000505237	HECW1	Q76N89	1606 aa		32.48	■■■□□ 2.79
PLXND1-208	ENST00000505237	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.48	■■■□□ 2.79
PLXND1-208	ENST00000505237	FANCA	O15360	1455 aa		32.48	■■■□□ 2.79
PLXND1-208	ENST00000505237	AKNA	Q7Z591	1439 aa		32.47	■■■□□ 2.79
PLXND1-208	ENST00000505237	FRMPD1	Q5SYB0	1578 aa		32.46	■■■□□ 2.79
PLXND1-208	ENST00000505237	TTC37	Q6PGP7	1564 aa		32.46	■■■□□ 2.79
PLXND1-208	ENST00000505237	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.44	■■■□□ 2.78
PLXND1-208	ENST00000505237	DENND4B	O75064	1496 aa	Predicted RBP	32.43	■■■□□ 2.78
PLXND1-208	ENST00000505237	CFAP74	Q9C0B2	1584 aa		32.42	■■■□□ 2.78
PLXND1-208	ENST00000505237	PLCH2	O75038	1416 aa		32.38	■■■□□ 2.77
PLXND1-208	ENST00000505237	RICTOR	Q6R327	1708 aa		32.34	■■■□□ 2.77
PLXND1-208	ENST00000505237	TRO	Q12816	1431 aa	Predicted RBP	32.31	■■■□□ 2.76
PLXND1-208	ENST00000505237	ARHGEF40	Q8TER5	1519 aa		32.3	■■■□□ 2.76
PLXND1-208	ENST00000505237	ZMYM4	Q5VZL5	1548 aa		32.28	■■■□□ 2.76
PLXND1-208	ENST00000505237	CASKIN1	Q8WXD9	1431 aa		32.27	■■■□□ 2.76
PLXND1-208	ENST00000505237	EFCAB2	Q5VUJ9	269 aa		32.27	■■■□□ 2.76
PLXND1-208	ENST00000505237	HECW2	Q9P2P5	1572 aa		32.27	■■■□□ 2.76
PLXND1-208	ENST00000505237	ADAMTSL3	P82987	1691 aa		32.27	■■■□□ 2.76
PLXND1-208	ENST00000505237	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.26	■■■□□ 2.76
PLXND1-208	ENST00000505237	CLIP1	P30622	1438 aa		32.26	■■■□□ 2.76
PLXND1-208	ENST00000505237	SCAPER	Q9BY12	1400 aa		32.26	■■■□□ 2.75
PLXND1-208	ENST00000505237	MAGI2	Q86UL8	1455 aa		32.24	■■■□□ 2.75
PLXND1-208	ENST00000505237	KIF14	Q15058	1648 aa		32.24	■■■□□ 2.75
PLXND1-208	ENST00000505237	POGZ	Q7Z3K3	1410 aa		32.23	■■■□□ 2.75
PLXND1-208	ENST00000505237	PTPRM	P28827	1452 aa		32.22	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms