RNA–Protein interactions for RNA: ENST00000505237.2

PLXND1-208, Transcript of plexin D1, humanhuman

TSL 5

Gene PLXND1, Length 507 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-208ENST00000505237 NISCHQ9Y2I1 1504 aa49.28■■■■■ 5.48
PLXND1-208ENST00000505237 CCDC180Q9P1Z9 1646 aa44.07■■■■■ 4.65
PLXND1-208ENST00000505237 ABCC9O60706 1549 aa43.87■■■■■ 4.61
PLXND1-208ENST00000505237 RB1CC1Q8TDY2 1594 aa41.87■■■■■ 4.29
PLXND1-208ENST00000505237 NACADO15069 1562 aa41.67■■■■■ 4.26
PLXND1-208ENST00000505237 DCAF8L2P0C7V8 631 aa41.47■■■■■ 4.23
PLXND1-208ENST00000505237 MYO15BQ96JP2 1530 aa41.22■■■■■ 4.19
PLXND1-208ENST00000505237 DNAJC5BQ9UF47 199 aa40.98■■■■■ 4.15
PLXND1-208ENST00000505237 PABPN1Q86U42 306 aaKnown RBP eCLIP40.9■■■■■ 4.14
PLXND1-208ENST00000505237 ZCCHC6Q5VYS8 1495 aaKnown RBP40.89■■■■■ 4.14
PLXND1-208ENST00000505237 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
PLXND1-208ENST00000505237 DCAF1Q9Y4B6 1507 aa40.76■■■■■ 4.12
PLXND1-208ENST00000505237 BICRAQ9NZM4 1560 aa40.63■■■■■ 4.09
PLXND1-208ENST00000505237 SHROOM4Q9ULL8 1493 aa40.19■■■■■ 4.03
PLXND1-208ENST00000505237 SCRIBQ14160 1630 aa40.15■■■■■ 4.02
PLXND1-208ENST00000505237 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
PLXND1-208ENST00000505237 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
PLXND1-208ENST00000505237 CECR2Q9BXF3 1484 aa39.52■■■■□ 3.92
PLXND1-208ENST00000505237 NCAPD3P42695 1498 aa38.5■■■■□ 3.75
PLXND1-208ENST00000505237 ATAD2BQ9ULI0 1458 aa38.39■■■■□ 3.74
PLXND1-208ENST00000505237 SMARCA4P51532 1647 aa38.35■■■■□ 3.73
PLXND1-208ENST00000505237 SMARCA2P51531 1590 aa38.28■■■■□ 3.72
PLXND1-208ENST00000505237 BAZ1AQ9NRL2 1556 aaPredicted RBP38.23■■■■□ 3.71
PLXND1-208ENST00000505237 HMGXB3Q12766 1538 aa38.19■■■■□ 3.7
PLXND1-208ENST00000505237 PEG3Q9GZU2 1588 aa38.03■■■■□ 3.68
PLXND1-208ENST00000505237 BAZ1BQ9UIG0 1483 aaKnown RBP38.01■■■■□ 3.67
PLXND1-208ENST00000505237 MROH2BQ7Z745 1585 aa37.95■■■■□ 3.67
PLXND1-208ENST00000505237 ERCC6Q03468 1493 aa37.87■■■■□ 3.65
PLXND1-208ENST00000505237 CUX2O14529 1486 aa37.76■■■■□ 3.63
PLXND1-208ENST00000505237 NESP48681 1621 aa37.74■■■■□ 3.63
PLXND1-208ENST00000505237 LAMC3Q9Y6N6 1575 aa37.54■■■■□ 3.6
PLXND1-208ENST00000505237 DNAJC5Q9H3Z4 198 aa37.51■■■■□ 3.6
PLXND1-208ENST00000505237 WIZO95785 1651 aa37.46■■■■□ 3.59
PLXND1-208ENST00000505237 PDS5BQ9NTI5 1447 aa37.36■■■■□ 3.57
PLXND1-208ENST00000505237 CADPSQ9ULU8 1353 aa37.33■■■■□ 3.57
PLXND1-208ENST00000505237 THOC2Q8NI27 1593 aaKnown RBP37.3■■■■□ 3.56
PLXND1-208ENST00000505237 RSF1Q96T23 1441 aaPredicted RBP37.29■■■■□ 3.56
PLXND1-208ENST00000505237 KIF21AQ7Z4S6 1674 aa37.2■■■■□ 3.55
PLXND1-208ENST00000505237 TOP2AP11388 1531 aaKnown RBP37.05■■■■□ 3.52
PLXND1-208ENST00000505237 MRC2Q9UBG0 1479 aa37■■■■□ 3.51
PLXND1-208ENST00000505237 CFTRP13569 1480 aa36.95■■■■□ 3.51
PLXND1-208ENST00000505237 WDR62O43379 1518 aa36.89■■■■□ 3.5
PLXND1-208ENST00000505237 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.5
PLXND1-208ENST00000505237 FANCD2Q9BXW9 1451 aa36.88■■■■□ 3.49
PLXND1-208ENST00000505237 CCDC88BA6NC98 1476 aa36.65■■■■□ 3.46
PLXND1-208ENST00000505237 URB2Q14146 1524 aaKnown RBP36.54■■■■□ 3.44
PLXND1-208ENST00000505237 PRDM2Q13029 1718 aa36.46■■■■□ 3.43
PLXND1-208ENST00000505237 TOPBP1Q92547 1522 aa36.19■■■■□ 3.38
PLXND1-208ENST00000505237 ABCC8Q09428 1581 aa36.17■■■■□ 3.38
PLXND1-208ENST00000505237 IFT140Q96RY7 1462 aa36.17■■■■□ 3.38
PLXND1-208ENST00000505237 OSCARQ8IYS5 282 aa36.1■■■■□ 3.37
PLXND1-208ENST00000505237 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
PLXND1-208ENST00000505237 ZNF608Q9ULD9 1512 aaPredicted RBP36.05■■■■□ 3.36
PLXND1-208ENST00000505237 TRIM41Q8WV44 630 aa35.89■■■■□ 3.34
PLXND1-208ENST00000505237 POLA1P09884 1462 aaPredicted RBP35.85■■■■□ 3.33
PLXND1-208ENST00000505237 TARBP1Q13395 1621 aaKnown RBP35.83■■■■□ 3.33
PLXND1-208ENST00000505237 EIF4G3O43432 1585 aaKnown RBP35.83■■■■□ 3.33
PLXND1-208ENST00000505237 SUPT5HO00267 1087 aaKnown RBP35.77■■■■□ 3.32
PLXND1-208ENST00000505237 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.32
PLXND1-208ENST00000505237 SOGA1O94964 1423 aa35.7■■■■□ 3.31
PLXND1-208ENST00000505237 RAD54L2Q9Y4B4 1467 aa35.69■■■■□ 3.3
PLXND1-208ENST00000505237 CUX1P39880 1505 aa35.64■■■■□ 3.3
PLXND1-208ENST00000505237 FGD5Q6ZNL6 1462 aa35.64■■■■□ 3.3
PLXND1-208ENST00000505237 TDRD9Q8NDG6 1382 aaKnown RBP35.6■■■■□ 3.29
PLXND1-208ENST00000505237 WDR97A6NE52 1622 aa35.52■■■■□ 3.28
PLXND1-208ENST00000505237 RIMBP3CA6NJZ7 1639 aa35.5■■■■□ 3.27
PLXND1-208ENST00000505237 RIMBP3BA6NNM3 1639 aa35.5■■■■□ 3.27
PLXND1-208ENST00000505237 RIMBP3Q9UFD9 1639 aa35.5■■■■□ 3.27
PLXND1-208ENST00000505237 FBLN2P98095 1184 aa35.48■■■■□ 3.27
PLXND1-208ENST00000505237 CHD1O14646 1710 aa35.47■■■■□ 3.27
PLXND1-208ENST00000505237 ARHGEF11O15085 1522 aa35.47■■■■□ 3.27
PLXND1-208ENST00000505237 SNAPC4Q5SXM2 1469 aa35.4■■■■□ 3.26
PLXND1-208ENST00000505237 GRIN2BQ13224 1484 aa35.36■■■■□ 3.25
PLXND1-208ENST00000505237 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
PLXND1-208ENST00000505237 CHMP7Q8WUX9 453 aaPredicted RBP35.29■■■■□ 3.24
PLXND1-208ENST00000505237 ABCA10Q8WWZ4 1543 aa35.27■■■■□ 3.24
PLXND1-208ENST00000505237 GAPVD1Q14C86 1478 aa35.26■■■■□ 3.23
PLXND1-208ENST00000505237 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
PLXND1-208ENST00000505237 CYB5RLQ6IPT4 315 aa35.21■■■■□ 3.23
PLXND1-208ENST00000505237 WRNQ14191 1432 aaPredicted RBP eCLIP35.2■■■■□ 3.23
PLXND1-208ENST00000505237 ABCA5Q8WWZ7 1642 aa35.16■■■■□ 3.22
PLXND1-208ENST00000505237 CLASP1Q7Z460 1538 aa35.16■■■■□ 3.22
PLXND1-208ENST00000505237 SYNJ1O43426 1573 aa35.15■■■■□ 3.22
PLXND1-208ENST00000505237 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
PLXND1-208ENST00000505237 ARAP1Q96P48 1450 aa35.13■■■■□ 3.21
PLXND1-208ENST00000505237 PBRM1Q86U86 1689 aa35.13■■■■□ 3.21
PLXND1-208ENST00000505237 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
PLXND1-208ENST00000505237 GRIN2AQ12879 1464 aa34.9■■■■□ 3.18
PLXND1-208ENST00000505237 ADAMTS12P58397 1594 aa34.87■■■■□ 3.17
PLXND1-208ENST00000505237 FHAD1B1AJZ9 1412 aa34.84■■■■□ 3.17
PLXND1-208ENST00000505237 ERICH3Q5RHP9 1530 aa34.84■■■■□ 3.17
PLXND1-208ENST00000505237 NUP160Q12769 1436 aa34.8■■■■□ 3.16
PLXND1-208ENST00000505237 CEP170Q5SW79 1584 aa34.73■■■■□ 3.15
PLXND1-208ENST00000505237 TRHP20396 242 aaPredicted RBP34.72■■■■□ 3.15
PLXND1-208ENST00000505237 ERCC6L2Q5T890 1561 aa34.59■■■■□ 3.13
PLXND1-208ENST00000505237 SHROOM2Q13796 1616 aa34.57■■■■□ 3.12
PLXND1-208ENST00000505237 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
PLXND1-208ENST00000505237 IGF1RP08069 1367 aa34.48■■■■□ 3.11
PLXND1-208ENST00000505237 JPH4Q96JJ6 628 aa34.45■■■■□ 3.11
PLXND1-208ENST00000505237 PRG4Q92954 1404 aaPredicted RBP34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms