RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
TPM3-218ENST00000505010 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
TPM3-218ENST00000505010 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
TPM3-218ENST00000505010 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
TPM3-218ENST00000505010 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
TPM3-218ENST00000505010 PRG4Q92954 1404 aaPredicted RBP15.27■□□□□ 0.04
TPM3-218ENST00000505010 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
TPM3-218ENST00000505010 ABCC10Q5T3U5 1492 aa15.27■□□□□ 0.03
TPM3-218ENST00000505010 KIF21BO75037 1637 aa15.26■□□□□ 0.03
TPM3-218ENST00000505010 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
TPM3-218ENST00000505010 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
TPM3-218ENST00000505010 LOC105371045A0A1W2PR82 267 aa15.21■□□□□ 0.03
TPM3-218ENST00000505010 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
TPM3-218ENST00000505010 CUL7Q14999 1698 aa15.2■□□□□ 0.02
TPM3-218ENST00000505010 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
TPM3-218ENST00000505010 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
TPM3-218ENST00000505010 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
TPM3-218ENST00000505010 KDM6BO15054 1643 aa15.17■□□□□ 0.02
TPM3-218ENST00000505010 DIP2BQ9P265 1576 aa15.16■□□□□ 0.02
TPM3-218ENST00000505010 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
TPM3-218ENST00000505010 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
TPM3-218ENST00000505010 IGF1RP08069 1367 aa15.13■□□□□ 0.01
TPM3-218ENST00000505010 TSPOAP1O95153 1857 aa15.1■□□□□ 0.01
TPM3-218ENST00000505010 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
TPM3-218ENST00000505010 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
TPM3-218ENST00000505010 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
TPM3-218ENST00000505010 TNIKQ9UKE5 1360 aa15.05■□□□□ -0
TPM3-218ENST00000505010 CTTNBP2Q8WZ74 1663 aa15.05■□□□□ -0
TPM3-218ENST00000505010 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
TPM3-218ENST00000505010 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
TPM3-218ENST00000505010 KIAA0586Q9BVV6 1533 aa15□□□□□ -0.01
TPM3-218ENST00000505010 CEP162Q5TB80 1403 aa15□□□□□ -0.01
TPM3-218ENST00000505010 PTPRGP23470 1445 aa14.99□□□□□ -0.01
TPM3-218ENST00000505010 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
TPM3-218ENST00000505010 ASXL2Q76L83 1435 aa14.94□□□□□ -0.02
TPM3-218ENST00000505010 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
TPM3-218ENST00000505010 CLIP1P30622 1438 aa14.92□□□□□ -0.02
TPM3-218ENST00000505010 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
TPM3-218ENST00000505010 GLI2P10070 1586 aa14.91□□□□□ -0.02
TPM3-218ENST00000505010 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
TPM3-218ENST00000505010 COL17A1Q9UMD9 1497 aaPredicted RBP14.89□□□□□ -0.03
TPM3-218ENST00000505010 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
TPM3-218ENST00000505010 PPRC1Q5VV67 1664 aaKnown RBP14.89□□□□□ -0.03
TPM3-218ENST00000505010 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
TPM3-218ENST00000505010 FBXO41Q8TF61 875 aa14.87□□□□□ -0.03
TPM3-218ENST00000505010 TEX14Q8IWB6 1497 aa14.85□□□□□ -0.03
TPM3-218ENST00000505010 UHRF1BP1LA0JNW5 1464 aa14.84□□□□□ -0.03
TPM3-218ENST00000505010 EFCAB5A4FU69 1503 aa14.84□□□□□ -0.03
TPM3-218ENST00000505010 UACAQ9BZF9 1416 aa14.83□□□□□ -0.03
TPM3-218ENST00000505010 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
TPM3-218ENST00000505010 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
TPM3-218ENST00000505010 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
TPM3-218ENST00000505010 MAP3K4Q9Y6R4 1608 aa14.8□□□□□ -0.04
TPM3-218ENST00000505010 KDM5BQ9UGL1 1544 aa14.77□□□□□ -0.04
TPM3-218ENST00000505010 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
TPM3-218ENST00000505010 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
TPM3-218ENST00000505010 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
TPM3-218ENST00000505010 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
TPM3-218ENST00000505010 DISP1Q96F81 1524 aa14.73□□□□□ -0.05
TPM3-218ENST00000505010 ZCCHC11Q5TAX3 1644 aaKnown RBP14.71□□□□□ -0.05
TPM3-218ENST00000505010 KCNH8Q96L42 1107 aa14.71□□□□□ -0.05
TPM3-218ENST00000505010 WDR7Q9Y4E6 1490 aa14.7□□□□□ -0.06
TPM3-218ENST00000505010 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
TPM3-218ENST00000505010 CD109Q6YHK3 1445 aa14.7□□□□□ -0.06
TPM3-218ENST00000505010 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
TPM3-218ENST00000505010 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
TPM3-218ENST00000505010 FMN1Q68DA7 1419 aa14.65□□□□□ -0.06
TPM3-218ENST00000505010 CFAP43Q8NDM7 1665 aa14.63□□□□□ -0.07
TPM3-218ENST00000505010 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
TPM3-218ENST00000505010 PTPRMP28827 1452 aa14.61□□□□□ -0.07
TPM3-218ENST00000505010 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
TPM3-218ENST00000505010 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
TPM3-218ENST00000505010 HECW1Q76N89 1606 aa14.6□□□□□ -0.07
TPM3-218ENST00000505010 LMTK3Q96Q04 1460 aa14.58□□□□□ -0.08
TPM3-218ENST00000505010 APLP2Q06481 763 aa14.58□□□□□ -0.08
TPM3-218ENST00000505010 TIAM1Q13009 1591 aa14.58□□□□□ -0.08
TPM3-218ENST00000505010 RAPGEF6Q8TEU7 1601 aa14.58□□□□□ -0.08
TPM3-218ENST00000505010 ARAP3Q8WWN8 1544 aa14.57□□□□□ -0.08
TPM3-218ENST00000505010 PPARGC1BQ86YN6 1023 aaKnown RBP14.56□□□□□ -0.08
TPM3-218ENST00000505010 ARID4BQ4LE39 1312 aaPredicted RBP14.56□□□□□ -0.08
TPM3-218ENST00000505010 PHLDB1Q86UU1 1377 aa14.55□□□□□ -0.08
TPM3-218ENST00000505010 RAPGEF3O95398 923 aa14.54□□□□□ -0.08
TPM3-218ENST00000505010 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
TPM3-218ENST00000505010 ADAMTSL3P82987 1691 aa14.53□□□□□ -0.08
TPM3-218ENST00000505010 MAP3K1Q13233 1512 aa14.53□□□□□ -0.08
TPM3-218ENST00000505010 CCDC18Q5T9S5 1454 aa14.51□□□□□ -0.09
TPM3-218ENST00000505010 ABCA8O94911 1581 aa14.51□□□□□ -0.09
TPM3-218ENST00000505010 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
TPM3-218ENST00000505010 CERKQ8TCT0 537 aa14.49□□□□□ -0.09
TPM3-218ENST00000505010 HSPA2P54652 639 aa14.48□□□□□ -0.09
TPM3-218ENST00000505010 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
TPM3-218ENST00000505010 CDK13Q14004 1512 aaKnown RBP14.47□□□□□ -0.09
TPM3-218ENST00000505010 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
TPM3-218ENST00000505010 SOCS7O14512 581 aa14.46□□□□□ -0.09
TPM3-218ENST00000505010 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.1
TPM3-218ENST00000505010 MADDQ8WXG6 1647 aa14.45□□□□□ -0.1
TPM3-218ENST00000505010 PLPPR3Q6T4P5 718 aa14.45□□□□□ -0.1
TPM3-218ENST00000505010 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
TPM3-218ENST00000505010 DISP3Q9P2K9 1392 aa14.45□□□□□ -0.1
TPM3-218ENST00000505010 ILDR2Q71H61 639 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms