RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 CARMIL1Q5VZK9 1371 aa43.48■■■■■ 4.55
PVT1-201ENST00000504719 PRG4Q92954 1404 aaPredicted RBP43.48■■■■■ 4.55
PVT1-201ENST00000504719 KIAA0586Q9BVV6 1533 aa43.41■■■■■ 4.54
PVT1-201ENST00000504719 TRHP20396 242 aaPredicted RBP43.4■■■■■ 4.54
PVT1-201ENST00000504719 RAPGEF2Q9Y4G8 1499 aa43.16■■■■■ 4.5
PVT1-201ENST00000504719 IQGAP2Q13576 1575 aa43.07■■■■■ 4.49
PVT1-201ENST00000504719 CARMIL2Q6F5E8 1435 aa42.94■■■■■ 4.46
PVT1-201ENST00000504719 ADCY10Q96PN6 1610 aa42.92■■■■■ 4.46
PVT1-201ENST00000504719 PTPRGP23470 1445 aa42.88■■■■■ 4.45
PVT1-201ENST00000504719 PRXQ9BXM0 1461 aa42.87■■■■■ 4.45
PVT1-201ENST00000504719 TNIKQ9UKE5 1360 aa42.86■■■■■ 4.45
PVT1-201ENST00000504719 UGGT2Q9NYU1 1516 aa42.84■■■■■ 4.45
PVT1-201ENST00000504719 DISP1Q96F81 1524 aa42.83■■■■■ 4.45
PVT1-201ENST00000504719 NPM1P06748 294 aaKnown RBP eCLIP42.82■■■■■ 4.45
PVT1-201ENST00000504719 CTTNBP2Q8WZ74 1663 aa42.82■■■■■ 4.44
PVT1-201ENST00000504719 KIF13AQ9H1H9 1805 aa42.76■■■■■ 4.44
PVT1-201ENST00000504719 TTBK1Q5TCY1 1321 aaPredicted RBP42.75■■■■■ 4.43
PVT1-201ENST00000504719 MAPKBP1O60336 1514 aa42.74■■■■■ 4.43
PVT1-201ENST00000504719 KIAA0556O60303 1618 aa42.69■■■■■ 4.42
PVT1-201ENST00000504719 CSRNP3Q8WYN3 585 aa42.69■■■■■ 4.42
PVT1-201ENST00000504719 EEA1Q15075 1411 aa42.63■■■■■ 4.41
PVT1-201ENST00000504719 ABCC10Q5T3U5 1492 aa42.62■■■■■ 4.41
PVT1-201ENST00000504719 UHRF1BP1LA0JNW5 1464 aa42.59■■■■■ 4.41
PVT1-201ENST00000504719 UACAQ9BZF9 1416 aa42.58■■■■■ 4.41
PVT1-201ENST00000504719 ABCC2Q92887 1545 aa42.57■■■■■ 4.41
PVT1-201ENST00000504719 DIP2BQ9P265 1576 aa42.54■■■■■ 4.4
PVT1-201ENST00000504719 FAM69CQ0P6D2 419 aa42.54■■■■■ 4.4
PVT1-201ENST00000504719 GOLGA3Q08378 1498 aa42.53■■■■■ 4.4
PVT1-201ENST00000504719 CHIC1Q5VXU3 224 aa42.45■■■■■ 4.39
PVT1-201ENST00000504719 FAM9AQ8IZU1 332 aaPredicted RBP42.4■■■■■ 4.38
PVT1-201ENST00000504719 KDM5BQ9UGL1 1544 aa42.39■■■■■ 4.38
PVT1-201ENST00000504719 ASXL2Q76L83 1435 aa42.37■■■■■ 4.37
PVT1-201ENST00000504719 PLB1Q6P1J6 1458 aa42.34■■■■■ 4.37
PVT1-201ENST00000504719 ZCCHC11Q5TAX3 1644 aaKnown RBP42.31■■■■■ 4.36
PVT1-201ENST00000504719 ABCA8O94911 1581 aa42.27■■■■■ 4.36
PVT1-201ENST00000504719 KIF21BO75037 1637 aa42.25■■■■■ 4.35
PVT1-201ENST00000504719 TSPOAP1O95153 1857 aa42.25■■■■■ 4.35
PVT1-201ENST00000504719 SAMD9Q5K651 1589 aa42.22■■■■■ 4.35
PVT1-201ENST00000504719 GLI2P10070 1586 aa42.21■■■■■ 4.35
PVT1-201ENST00000504719 P3H3Q8IVL6 736 aa42.2■■■■■ 4.35
PVT1-201ENST00000504719 EPRSP07814 1512 aaKnown RBP42.12■■■■■ 4.33
PVT1-201ENST00000504719 PPRC1Q5VV67 1664 aaKnown RBP42.05■■■■■ 4.32
PVT1-201ENST00000504719 WDR7Q9Y4E6 1490 aa42.04■■■■■ 4.32
PVT1-201ENST00000504719 RANGAP1P46060 587 aaPredicted RBP42.02■■■■■ 4.32
PVT1-201ENST00000504719 KDM6BO15054 1643 aa42■■■■■ 4.31
PVT1-201ENST00000504719 MAP3K4Q9Y6R4 1608 aa42■■■■■ 4.31
PVT1-201ENST00000504719 RAPGEF6Q8TEU7 1601 aa41.93■■■■■ 4.3
PVT1-201ENST00000504719 FHOD3Q2V2M9 1422 aa41.93■■■■■ 4.3
PVT1-201ENST00000504719 ATP10BO94823 1461 aa41.91■■■■■ 4.3
PVT1-201ENST00000504719 EFCAB5A4FU69 1503 aa41.9■■■■■ 4.3
PVT1-201ENST00000504719 EHMT2Q96KQ7 1210 aa41.89■■■■■ 4.3
PVT1-201ENST00000504719 UBTFP17480 764 aaKnown RBP41.87■■■■■ 4.29
PVT1-201ENST00000504719 ARID3CA6NKF2 412 aa41.86■■■■■ 4.29
PVT1-201ENST00000504719 KCNH8Q96L42 1107 aa41.84■■■■■ 4.29
PVT1-201ENST00000504719 TEX14Q8IWB6 1497 aa41.8■■■■■ 4.28
PVT1-201ENST00000504719 CFAP43Q8NDM7 1665 aa41.8■■■■■ 4.28
PVT1-201ENST00000504719 NUP153P49790 1475 aaKnown RBP41.76■■■■■ 4.28
PVT1-201ENST00000504719 CD109Q6YHK3 1445 aa41.73■■■■■ 4.27
PVT1-201ENST00000504719 MAGI3Q5TCQ9 1506 aa41.69■■■■■ 4.26
PVT1-201ENST00000504719 COL17A1Q9UMD9 1497 aaPredicted RBP41.67■■■■■ 4.26
PVT1-201ENST00000504719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.65■■■■■ 4.26
PVT1-201ENST00000504719 HNRNPUL2Q1KMD3 747 aaKnown RBP41.65■■■■■ 4.26
PVT1-201ENST00000504719 AEBP2Q6ZN18 517 aaPredicted RBP41.63■■■■■ 4.25
PVT1-201ENST00000504719 ARHGAP35Q9NRY4 1499 aa41.62■■■■■ 4.25
PVT1-201ENST00000504719 ABCA9Q8IUA7 1624 aa41.58■■■■■ 4.25
PVT1-201ENST00000504719 FMN1Q68DA7 1419 aa41.52■■■■■ 4.24
PVT1-201ENST00000504719 PLEKHD1A6NEE1 506 aa41.48■■■■■ 4.23
PVT1-201ENST00000504719 CDK13Q14004 1512 aaKnown RBP41.41■■■■■ 4.22
PVT1-201ENST00000504719 HECW1Q76N89 1606 aa41.4■■■■■ 4.22
PVT1-201ENST00000504719 ARAP3Q8WWN8 1544 aa41.35■■■■■ 4.21
PVT1-201ENST00000504719 ATP1B4Q9UN42 357 aaPredicted RBP41.33■■■■■ 4.21
PVT1-201ENST00000504719 KDM4FA0A1W2PPD8 638 aa41.32■■■■■ 4.21
PVT1-201ENST00000504719 PHLDB1Q86UU1 1377 aa41.32■■■■■ 4.21
PVT1-201ENST00000504719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.28■■■■■ 4.2
PVT1-201ENST00000504719 NEO1Q92859 1461 aa41.28■■■■■ 4.2
PVT1-201ENST00000504719 LRRIQ1Q96JM4 1722 aa41.21■■■■■ 4.19
PVT1-201ENST00000504719 TTC37Q6PGP7 1564 aa41.21■■■■■ 4.19
PVT1-201ENST00000504719 CDK11AQ9UQ88 783 aaPredicted RBP41.16■■■■■ 4.18
PVT1-201ENST00000504719 CLIP1P30622 1438 aa41.16■■■■■ 4.18
PVT1-201ENST00000504719 CASKIN1Q8WXD9 1431 aa41.14■■■■■ 4.18
PVT1-201ENST00000504719 PCF11O94913 1555 aaKnown RBP41.13■■■■■ 4.18
PVT1-201ENST00000504719 ADGRL1O94910 1474 aa41.12■■■■■ 4.17
PVT1-201ENST00000504719 RAPGEF3O95398 923 aa41.1■■■■■ 4.17
PVT1-201ENST00000504719 CFAP74Q9C0B2 1584 aa41.1■■■■■ 4.17
PVT1-201ENST00000504719 FANCAO15360 1455 aa41.09■■■■■ 4.17
PVT1-201ENST00000504719 AKNAQ7Z591 1439 aa41.08■■■■■ 4.17
PVT1-201ENST00000504719 TROQ12816 1431 aaPredicted RBP41.06■■■■■ 4.16
PVT1-201ENST00000504719 FRMPD1Q5SYB0 1578 aa41.05■■■■■ 4.16
PVT1-201ENST00000504719 CCDC18Q5T9S5 1454 aa41.03■■■■■ 4.16
PVT1-201ENST00000504719 KIF14Q15058 1648 aa41.03■■■■■ 4.16
PVT1-201ENST00000504719 PLCH2O75038 1416 aa41.02■■■■■ 4.16
PVT1-201ENST00000504719 FYCO1Q9BQS8 1478 aa41■■■■■ 4.15
PVT1-201ENST00000504719 MYO5CQ9NQX4 1742 aa40.98■■■■■ 4.15
PVT1-201ENST00000504719 DENND4BO75064 1496 aaPredicted RBP40.98■■■■■ 4.15
PVT1-201ENST00000504719 RICTORQ6R327 1708 aa40.97■■■■■ 4.15
PVT1-201ENST00000504719 EFCAB2Q5VUJ9 269 aa40.85■■■■■ 4.13
PVT1-201ENST00000504719 CEP162Q5TB80 1403 aa40.84■■■■■ 4.13
PVT1-201ENST00000504719 SCAPERQ9BY12 1400 aa40.82■■■■■ 4.12
PVT1-201ENST00000504719 ZMYM4Q5VZL5 1548 aa40.8■■■■■ 4.12
PVT1-201ENST00000504719 ARHGEF40Q8TER5 1519 aa40.78■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms