RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
POLR2J3-210ENST00000504677 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
POLR2J3-210ENST00000504677 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
POLR2J3-210ENST00000504677 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
POLR2J3-210ENST00000504677 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
POLR2J3-210ENST00000504677 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
POLR2J3-210ENST00000504677 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
POLR2J3-210ENST00000504677 SAMD9Q5K651 1589 aa18.79■□□□□ 0.6
POLR2J3-210ENST00000504677 NUP160Q12769 1436 aa18.77■□□□□ 0.6
POLR2J3-210ENST00000504677 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
POLR2J3-210ENST00000504677 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
POLR2J3-210ENST00000504677 UGGT2Q9NYU1 1516 aa18.74■□□□□ 0.59
POLR2J3-210ENST00000504677 CHD1O14646 1710 aa18.74■□□□□ 0.59
POLR2J3-210ENST00000504677 FBLN2P98095 1184 aa18.69■□□□□ 0.58
POLR2J3-210ENST00000504677 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
POLR2J3-210ENST00000504677 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
POLR2J3-210ENST00000504677 KIAA0556O60303 1618 aa18.64■□□□□ 0.57
POLR2J3-210ENST00000504677 APLP2Q06481 763 aa18.63■□□□□ 0.57
POLR2J3-210ENST00000504677 FYCO1Q9BQS8 1478 aa18.63■□□□□ 0.57
POLR2J3-210ENST00000504677 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
POLR2J3-210ENST00000504677 MAP3K1Q13233 1512 aa18.6■□□□□ 0.57
POLR2J3-210ENST00000504677 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
POLR2J3-210ENST00000504677 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
POLR2J3-210ENST00000504677 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.57
POLR2J3-210ENST00000504677 CFAP43Q8NDM7 1665 aa18.57■□□□□ 0.56
POLR2J3-210ENST00000504677 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
POLR2J3-210ENST00000504677 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
POLR2J3-210ENST00000504677 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
POLR2J3-210ENST00000504677 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
POLR2J3-210ENST00000504677 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
POLR2J3-210ENST00000504677 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
POLR2J3-210ENST00000504677 HECW1Q76N89 1606 aa18.52■□□□□ 0.56
POLR2J3-210ENST00000504677 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
POLR2J3-210ENST00000504677 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
POLR2J3-210ENST00000504677 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
POLR2J3-210ENST00000504677 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
POLR2J3-210ENST00000504677 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
POLR2J3-210ENST00000504677 LRRIQ1Q96JM4 1722 aa18.42■□□□□ 0.54
POLR2J3-210ENST00000504677 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
POLR2J3-210ENST00000504677 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
POLR2J3-210ENST00000504677 EPRSP07814 1512 aaKnown RBP18.38■□□□□ 0.53
POLR2J3-210ENST00000504677 EHBP1L1Q8N3D4 1523 aa18.37■□□□□ 0.53
POLR2J3-210ENST00000504677 ABCA8O94911 1581 aa18.37■□□□□ 0.53
POLR2J3-210ENST00000504677 NUP153P49790 1475 aaKnown RBP18.35■□□□□ 0.53
POLR2J3-210ENST00000504677 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
POLR2J3-210ENST00000504677 PTPRGP23470 1445 aa18.34■□□□□ 0.53
POLR2J3-210ENST00000504677 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.53
POLR2J3-210ENST00000504677 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
POLR2J3-210ENST00000504677 PLB1Q6P1J6 1458 aa18.33■□□□□ 0.52
POLR2J3-210ENST00000504677 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
POLR2J3-210ENST00000504677 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
POLR2J3-210ENST00000504677 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
POLR2J3-210ENST00000504677 CDK13Q14004 1512 aaKnown RBP18.29■□□□□ 0.52
POLR2J3-210ENST00000504677 UACAQ9BZF9 1416 aa18.26■□□□□ 0.51
POLR2J3-210ENST00000504677 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
POLR2J3-210ENST00000504677 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
POLR2J3-210ENST00000504677 CDK11AQ9UQ88 783 aaPredicted RBP18.24■□□□□ 0.51
POLR2J3-210ENST00000504677 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
POLR2J3-210ENST00000504677 UHRF1BP1LA0JNW5 1464 aa18.23■□□□□ 0.51
POLR2J3-210ENST00000504677 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
POLR2J3-210ENST00000504677 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
POLR2J3-210ENST00000504677 ADCY10Q96PN6 1610 aa18.2■□□□□ 0.5
POLR2J3-210ENST00000504677 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
POLR2J3-210ENST00000504677 TROQ12816 1431 aaPredicted RBP18.19■□□□□ 0.5
POLR2J3-210ENST00000504677 PHLDB1Q86UU1 1377 aa18.18■□□□□ 0.5
POLR2J3-210ENST00000504677 ATP10BO94823 1461 aa18.18■□□□□ 0.5
POLR2J3-210ENST00000504677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
POLR2J3-210ENST00000504677 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
POLR2J3-210ENST00000504677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.5
POLR2J3-210ENST00000504677 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
POLR2J3-210ENST00000504677 KIF14Q15058 1648 aa18.14■□□□□ 0.49
POLR2J3-210ENST00000504677 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
POLR2J3-210ENST00000504677 ARID3CA6NKF2 412 aa18.13■□□□□ 0.49
POLR2J3-210ENST00000504677 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
POLR2J3-210ENST00000504677 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
POLR2J3-210ENST00000504677 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
POLR2J3-210ENST00000504677 PLEKHD1A6NEE1 506 aa18.1■□□□□ 0.49
POLR2J3-210ENST00000504677 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
POLR2J3-210ENST00000504677 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
POLR2J3-210ENST00000504677 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
POLR2J3-210ENST00000504677 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
POLR2J3-210ENST00000504677 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
POLR2J3-210ENST00000504677 CDC42BPAQ5VT25 1732 aa18■□□□□ 0.47
POLR2J3-210ENST00000504677 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
POLR2J3-210ENST00000504677 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
POLR2J3-210ENST00000504677 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
POLR2J3-210ENST00000504677 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-210ENST00000504677 PREX2Q70Z35 1606 aa17.97■□□□□ 0.47
POLR2J3-210ENST00000504677 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
POLR2J3-210ENST00000504677 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
POLR2J3-210ENST00000504677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.46
POLR2J3-210ENST00000504677 TTC37Q6PGP7 1564 aa17.93■□□□□ 0.46
POLR2J3-210ENST00000504677 DNMT1P26358 1616 aaKnown RBP17.92■□□□□ 0.46
POLR2J3-210ENST00000504677 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
POLR2J3-210ENST00000504677 CAMSAP2Q08AD1 1489 aa17.92■□□□□ 0.46
POLR2J3-210ENST00000504677 CFDP1Q9UEE9 299 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-210ENST00000504677 ARAP3Q8WWN8 1544 aa17.89■□□□□ 0.45
POLR2J3-210ENST00000504677 CDC42BPBQ9Y5S2 1711 aa17.89■□□□□ 0.45
POLR2J3-210ENST00000504677 ASXL2Q76L83 1435 aa17.89■□□□□ 0.45
POLR2J3-210ENST00000504677 AKNAQ7Z591 1439 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms