RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
POLR2J3-210ENST00000504677 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
POLR2J3-210ENST00000504677 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
POLR2J3-210ENST00000504677 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
POLR2J3-210ENST00000504677 ABCC9O60706 1549 aa22.67■■□□□ 1.22
POLR2J3-210ENST00000504677 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
POLR2J3-210ENST00000504677 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
POLR2J3-210ENST00000504677 NACADO15069 1562 aa22.42■■□□□ 1.18
POLR2J3-210ENST00000504677 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
POLR2J3-210ENST00000504677 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
POLR2J3-210ENST00000504677 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
POLR2J3-210ENST00000504677 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
POLR2J3-210ENST00000504677 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
POLR2J3-210ENST00000504677 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
POLR2J3-210ENST00000504677 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
POLR2J3-210ENST00000504677 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
POLR2J3-210ENST00000504677 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-210ENST00000504677 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-210ENST00000504677 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
POLR2J3-210ENST00000504677 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
POLR2J3-210ENST00000504677 WIZO95785 1651 aa20.94■□□□□ 0.94
POLR2J3-210ENST00000504677 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
POLR2J3-210ENST00000504677 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
POLR2J3-210ENST00000504677 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
POLR2J3-210ENST00000504677 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-210ENST00000504677 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
POLR2J3-210ENST00000504677 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
POLR2J3-210ENST00000504677 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
POLR2J3-210ENST00000504677 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
POLR2J3-210ENST00000504677 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
POLR2J3-210ENST00000504677 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
POLR2J3-210ENST00000504677 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
POLR2J3-210ENST00000504677 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
POLR2J3-210ENST00000504677 CFTRP13569 1480 aa20.14■□□□□ 0.81
POLR2J3-210ENST00000504677 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
POLR2J3-210ENST00000504677 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
POLR2J3-210ENST00000504677 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
POLR2J3-210ENST00000504677 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
POLR2J3-210ENST00000504677 ABCC8Q09428 1581 aa20■□□□□ 0.79
POLR2J3-210ENST00000504677 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
POLR2J3-210ENST00000504677 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
POLR2J3-210ENST00000504677 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
POLR2J3-210ENST00000504677 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
POLR2J3-210ENST00000504677 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
POLR2J3-210ENST00000504677 NESP48681 1621 aa19.84■□□□□ 0.77
POLR2J3-210ENST00000504677 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
POLR2J3-210ENST00000504677 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
POLR2J3-210ENST00000504677 CUX1P39880 1505 aa19.77■□□□□ 0.76
POLR2J3-210ENST00000504677 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
POLR2J3-210ENST00000504677 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
POLR2J3-210ENST00000504677 EEA1Q15075 1411 aa19.7■□□□□ 0.74
POLR2J3-210ENST00000504677 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
POLR2J3-210ENST00000504677 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
POLR2J3-210ENST00000504677 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
POLR2J3-210ENST00000504677 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
POLR2J3-210ENST00000504677 SOGA1O94964 1423 aa19.58■□□□□ 0.72
POLR2J3-210ENST00000504677 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
POLR2J3-210ENST00000504677 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
POLR2J3-210ENST00000504677 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
POLR2J3-210ENST00000504677 WDR62O43379 1518 aa19.5■□□□□ 0.71
POLR2J3-210ENST00000504677 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
POLR2J3-210ENST00000504677 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
POLR2J3-210ENST00000504677 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
POLR2J3-210ENST00000504677 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-210ENST00000504677 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
POLR2J3-210ENST00000504677 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
POLR2J3-210ENST00000504677 KIF21BO75037 1637 aa19.43■□□□□ 0.7
POLR2J3-210ENST00000504677 CUX2O14529 1486 aa19.42■□□□□ 0.7
POLR2J3-210ENST00000504677 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
POLR2J3-210ENST00000504677 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
POLR2J3-210ENST00000504677 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
POLR2J3-210ENST00000504677 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
POLR2J3-210ENST00000504677 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
POLR2J3-210ENST00000504677 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.69
POLR2J3-210ENST00000504677 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
POLR2J3-210ENST00000504677 PRXQ9BXM0 1461 aa19.31■□□□□ 0.68
POLR2J3-210ENST00000504677 CUL7Q14999 1698 aa19.27■□□□□ 0.68
POLR2J3-210ENST00000504677 IGF1RP08069 1367 aa19.25■□□□□ 0.67
POLR2J3-210ENST00000504677 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
POLR2J3-210ENST00000504677 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
POLR2J3-210ENST00000504677 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
POLR2J3-210ENST00000504677 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
POLR2J3-210ENST00000504677 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
POLR2J3-210ENST00000504677 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-210ENST00000504677 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
POLR2J3-210ENST00000504677 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
POLR2J3-210ENST00000504677 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
POLR2J3-210ENST00000504677 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
POLR2J3-210ENST00000504677 CEP162Q5TB80 1403 aa19.12■□□□□ 0.65
POLR2J3-210ENST00000504677 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
POLR2J3-210ENST00000504677 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
POLR2J3-210ENST00000504677 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
POLR2J3-210ENST00000504677 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
POLR2J3-210ENST00000504677 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
POLR2J3-210ENST00000504677 CTTNBP2Q8WZ74 1663 aa19.02■□□□□ 0.64
POLR2J3-210ENST00000504677 CLIP1P30622 1438 aa19■□□□□ 0.63
POLR2J3-210ENST00000504677 SNAPC4Q5SXM2 1469 aa18.99■□□□□ 0.63
POLR2J3-210ENST00000504677 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
POLR2J3-210ENST00000504677 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
POLR2J3-210ENST00000504677 EFCAB5A4FU69 1503 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms