RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
TRIO-206ENST00000504606 NUP160Q12769 1436 aa18.25■□□□□ 0.51
TRIO-206ENST00000504606 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
TRIO-206ENST00000504606 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
TRIO-206ENST00000504606 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
TRIO-206ENST00000504606 IQGAP2Q13576 1575 aa18.21■□□□□ 0.51
TRIO-206ENST00000504606 CLIP1P30622 1438 aa18.18■□□□□ 0.5
TRIO-206ENST00000504606 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
TRIO-206ENST00000504606 UGGT2Q9NYU1 1516 aa18.12■□□□□ 0.49
TRIO-206ENST00000504606 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
TRIO-206ENST00000504606 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
TRIO-206ENST00000504606 EFCAB5A4FU69 1503 aa18.1■□□□□ 0.49
TRIO-206ENST00000504606 JPH4Q96JJ6 628 aa18.09■□□□□ 0.49
TRIO-206ENST00000504606 SAMD9Q5K651 1589 aa18.08■□□□□ 0.49
TRIO-206ENST00000504606 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
TRIO-206ENST00000504606 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
TRIO-206ENST00000504606 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
TRIO-206ENST00000504606 KIAA0556O60303 1618 aa18.04■□□□□ 0.48
TRIO-206ENST00000504606 DISP1Q96F81 1524 aa18.03■□□□□ 0.48
TRIO-206ENST00000504606 FHOD3Q2V2M9 1422 aa18.03■□□□□ 0.48
TRIO-206ENST00000504606 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.48
TRIO-206ENST00000504606 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.48
TRIO-206ENST00000504606 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
TRIO-206ENST00000504606 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
TRIO-206ENST00000504606 FMN1Q68DA7 1419 aa17.93■□□□□ 0.46
TRIO-206ENST00000504606 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
TRIO-206ENST00000504606 PCF11O94913 1555 aaKnown RBP17.88■□□□□ 0.45
TRIO-206ENST00000504606 PTPRGP23470 1445 aa17.87■□□□□ 0.45
TRIO-206ENST00000504606 CASKIN1Q8WXD9 1431 aa17.85■□□□□ 0.45
TRIO-206ENST00000504606 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
TRIO-206ENST00000504606 FYCO1Q9BQS8 1478 aa17.83■□□□□ 0.45
TRIO-206ENST00000504606 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
TRIO-206ENST00000504606 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
TRIO-206ENST00000504606 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
TRIO-206ENST00000504606 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
TRIO-206ENST00000504606 ABCA8O94911 1581 aa17.79■□□□□ 0.44
TRIO-206ENST00000504606 APLP2Q06481 763 aa17.79■□□□□ 0.44
TRIO-206ENST00000504606 RIMBP3CA6NJZ7 1639 aa17.77■□□□□ 0.44
TRIO-206ENST00000504606 RIMBP3BA6NNM3 1639 aa17.77■□□□□ 0.44
TRIO-206ENST00000504606 RIMBP3Q9UFD9 1639 aa17.77■□□□□ 0.44
TRIO-206ENST00000504606 UACAQ9BZF9 1416 aa17.76■□□□□ 0.43
TRIO-206ENST00000504606 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
TRIO-206ENST00000504606 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
TRIO-206ENST00000504606 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
TRIO-206ENST00000504606 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
TRIO-206ENST00000504606 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
TRIO-206ENST00000504606 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
TRIO-206ENST00000504606 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
TRIO-206ENST00000504606 ARID3CA6NKF2 412 aa17.72■□□□□ 0.43
TRIO-206ENST00000504606 MAP3K1Q13233 1512 aa17.72■□□□□ 0.43
TRIO-206ENST00000504606 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
TRIO-206ENST00000504606 CDK13Q14004 1512 aaKnown RBP17.7■□□□□ 0.42
TRIO-206ENST00000504606 UHRF1BP1LA0JNW5 1464 aa17.69■□□□□ 0.42
TRIO-206ENST00000504606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
TRIO-206ENST00000504606 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
TRIO-206ENST00000504606 ADCY10Q96PN6 1610 aa17.66■□□□□ 0.42
TRIO-206ENST00000504606 ATP10BO94823 1461 aa17.65■□□□□ 0.42
TRIO-206ENST00000504606 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
TRIO-206ENST00000504606 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
TRIO-206ENST00000504606 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
TRIO-206ENST00000504606 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
TRIO-206ENST00000504606 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
TRIO-206ENST00000504606 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
TRIO-206ENST00000504606 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
TRIO-206ENST00000504606 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
TRIO-206ENST00000504606 EHBP1L1Q8N3D4 1523 aa17.6■□□□□ 0.41
TRIO-206ENST00000504606 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
TRIO-206ENST00000504606 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRIO-206ENST00000504606 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
TRIO-206ENST00000504606 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
TRIO-206ENST00000504606 SUPT6HQ7KZ85 1726 aaKnown RBP17.53■□□□□ 0.4
TRIO-206ENST00000504606 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
TRIO-206ENST00000504606 KIF14Q15058 1648 aa17.48■□□□□ 0.39
TRIO-206ENST00000504606 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
TRIO-206ENST00000504606 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
TRIO-206ENST00000504606 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
TRIO-206ENST00000504606 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
TRIO-206ENST00000504606 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
TRIO-206ENST00000504606 ABCC10Q5T3U5 1492 aa17.41■□□□□ 0.38
TRIO-206ENST00000504606 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
TRIO-206ENST00000504606 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
TRIO-206ENST00000504606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRIO-206ENST00000504606 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.38
TRIO-206ENST00000504606 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
TRIO-206ENST00000504606 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
TRIO-206ENST00000504606 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
TRIO-206ENST00000504606 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
TRIO-206ENST00000504606 GPATCH8Q9UKJ3 1502 aaKnown RBP17.36■□□□□ 0.37
TRIO-206ENST00000504606 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
TRIO-206ENST00000504606 ABCA9Q8IUA7 1624 aa17.34■□□□□ 0.37
TRIO-206ENST00000504606 MYO5CQ9NQX4 1742 aa17.33■□□□□ 0.37
TRIO-206ENST00000504606 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
TRIO-206ENST00000504606 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
TRIO-206ENST00000504606 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
TRIO-206ENST00000504606 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
TRIO-206ENST00000504606 CDC42BPBQ9Y5S2 1711 aa17.3■□□□□ 0.36
TRIO-206ENST00000504606 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
TRIO-206ENST00000504606 DIP2BQ9P265 1576 aa17.29■□□□□ 0.36
TRIO-206ENST00000504606 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
TRIO-206ENST00000504606 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms