RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
TRIO-206ENST00000504606 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
TRIO-206ENST00000504606 ABCC9O60706 1549 aa22.34■■□□□ 1.17
TRIO-206ENST00000504606 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
TRIO-206ENST00000504606 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
TRIO-206ENST00000504606 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
TRIO-206ENST00000504606 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
TRIO-206ENST00000504606 NACADO15069 1562 aa21.79■■□□□ 1.08
TRIO-206ENST00000504606 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
TRIO-206ENST00000504606 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
TRIO-206ENST00000504606 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
TRIO-206ENST00000504606 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
TRIO-206ENST00000504606 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.95
TRIO-206ENST00000504606 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRIO-206ENST00000504606 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
TRIO-206ENST00000504606 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
TRIO-206ENST00000504606 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
TRIO-206ENST00000504606 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
TRIO-206ENST00000504606 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
TRIO-206ENST00000504606 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
TRIO-206ENST00000504606 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
TRIO-206ENST00000504606 WIZO95785 1651 aa20.28■□□□□ 0.84
TRIO-206ENST00000504606 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
TRIO-206ENST00000504606 CC2D2AQ9P2K1 1620 aa20.21■□□□□ 0.83
TRIO-206ENST00000504606 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
TRIO-206ENST00000504606 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
TRIO-206ENST00000504606 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
TRIO-206ENST00000504606 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.81
TRIO-206ENST00000504606 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
TRIO-206ENST00000504606 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
TRIO-206ENST00000504606 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
TRIO-206ENST00000504606 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.76
TRIO-206ENST00000504606 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
TRIO-206ENST00000504606 CFTRP13569 1480 aa19.54■□□□□ 0.72
TRIO-206ENST00000504606 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
TRIO-206ENST00000504606 NESP48681 1621 aa19.49■□□□□ 0.71
TRIO-206ENST00000504606 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
TRIO-206ENST00000504606 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
TRIO-206ENST00000504606 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
TRIO-206ENST00000504606 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
TRIO-206ENST00000504606 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
TRIO-206ENST00000504606 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
TRIO-206ENST00000504606 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
TRIO-206ENST00000504606 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
TRIO-206ENST00000504606 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
TRIO-206ENST00000504606 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
TRIO-206ENST00000504606 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
TRIO-206ENST00000504606 CUX1P39880 1505 aa19.15■□□□□ 0.66
TRIO-206ENST00000504606 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
TRIO-206ENST00000504606 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
TRIO-206ENST00000504606 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
TRIO-206ENST00000504606 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
TRIO-206ENST00000504606 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
TRIO-206ENST00000504606 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
TRIO-206ENST00000504606 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
TRIO-206ENST00000504606 WDR62O43379 1518 aa19.03■□□□□ 0.64
TRIO-206ENST00000504606 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.63
TRIO-206ENST00000504606 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
TRIO-206ENST00000504606 SOGA1O94964 1423 aa18.9■□□□□ 0.62
TRIO-206ENST00000504606 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
TRIO-206ENST00000504606 CUX2O14529 1486 aa18.87■□□□□ 0.61
TRIO-206ENST00000504606 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.61
TRIO-206ENST00000504606 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
TRIO-206ENST00000504606 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
TRIO-206ENST00000504606 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
TRIO-206ENST00000504606 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
TRIO-206ENST00000504606 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
TRIO-206ENST00000504606 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
TRIO-206ENST00000504606 EEA1Q15075 1411 aa18.78■□□□□ 0.6
TRIO-206ENST00000504606 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
TRIO-206ENST00000504606 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
TRIO-206ENST00000504606 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
TRIO-206ENST00000504606 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
TRIO-206ENST00000504606 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
TRIO-206ENST00000504606 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRIO-206ENST00000504606 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
TRIO-206ENST00000504606 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
TRIO-206ENST00000504606 IGF1RP08069 1367 aa18.63■□□□□ 0.57
TRIO-206ENST00000504606 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
TRIO-206ENST00000504606 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
TRIO-206ENST00000504606 CUL7Q14999 1698 aa18.57■□□□□ 0.56
TRIO-206ENST00000504606 KIF21BO75037 1637 aa18.56■□□□□ 0.56
TRIO-206ENST00000504606 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
TRIO-206ENST00000504606 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
TRIO-206ENST00000504606 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
TRIO-206ENST00000504606 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
TRIO-206ENST00000504606 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
TRIO-206ENST00000504606 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
TRIO-206ENST00000504606 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
TRIO-206ENST00000504606 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
TRIO-206ENST00000504606 MAGI1Q96QZ7 1491 aaPredicted RBP18.49■□□□□ 0.55
TRIO-206ENST00000504606 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
TRIO-206ENST00000504606 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
TRIO-206ENST00000504606 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
TRIO-206ENST00000504606 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
TRIO-206ENST00000504606 FBLN2P98095 1184 aa18.38■□□□□ 0.53
TRIO-206ENST00000504606 GRIN2AQ12879 1464 aa18.38■□□□□ 0.53
TRIO-206ENST00000504606 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
TRIO-206ENST00000504606 CHD1O14646 1710 aa18.34■□□□□ 0.53
TRIO-206ENST00000504606 CTTNBP2Q8WZ74 1663 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms