RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 IGF1RP08069 1367 aa17.6■□□□□ 0.41
COPS4-202ENST00000503682 SHROOM2Q13796 1616 aa17.58■□□□□ 0.4
COPS4-202ENST00000503682 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
COPS4-202ENST00000503682 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
COPS4-202ENST00000503682 CUL7Q14999 1698 aa17.54■□□□□ 0.4
COPS4-202ENST00000503682 JPH4Q96JJ6 628 aa17.52■□□□□ 0.39
COPS4-202ENST00000503682 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
COPS4-202ENST00000503682 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
COPS4-202ENST00000503682 FOXD1Q16676 465 aa17.45■□□□□ 0.38
COPS4-202ENST00000503682 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
COPS4-202ENST00000503682 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
COPS4-202ENST00000503682 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
COPS4-202ENST00000503682 IQGAP2Q13576 1575 aa17.33■□□□□ 0.37
COPS4-202ENST00000503682 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
COPS4-202ENST00000503682 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
COPS4-202ENST00000503682 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
COPS4-202ENST00000503682 PTPRGP23470 1445 aa17.25■□□□□ 0.35
COPS4-202ENST00000503682 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
COPS4-202ENST00000503682 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
COPS4-202ENST00000503682 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
COPS4-202ENST00000503682 TNIKQ9UKE5 1360 aa17.22■□□□□ 0.35
COPS4-202ENST00000503682 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
COPS4-202ENST00000503682 UGGT2Q9NYU1 1516 aa17.2■□□□□ 0.34
COPS4-202ENST00000503682 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
COPS4-202ENST00000503682 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
COPS4-202ENST00000503682 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
COPS4-202ENST00000503682 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
COPS4-202ENST00000503682 FAM69CQ0P6D2 419 aa17.16■□□□□ 0.34
COPS4-202ENST00000503682 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
COPS4-202ENST00000503682 ABCC10Q5T3U5 1492 aa17.14■□□□□ 0.33
COPS4-202ENST00000503682 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
COPS4-202ENST00000503682 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
COPS4-202ENST00000503682 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
COPS4-202ENST00000503682 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
COPS4-202ENST00000503682 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
COPS4-202ENST00000503682 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
COPS4-202ENST00000503682 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
COPS4-202ENST00000503682 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
COPS4-202ENST00000503682 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
COPS4-202ENST00000503682 EEA1Q15075 1411 aa17.06■□□□□ 0.32
COPS4-202ENST00000503682 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
COPS4-202ENST00000503682 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
COPS4-202ENST00000503682 KDM5BQ9UGL1 1544 aa17.02■□□□□ 0.32
COPS4-202ENST00000503682 ABCA8O94911 1581 aa17■□□□□ 0.31
COPS4-202ENST00000503682 ARID3CA6NKF2 412 aa17■□□□□ 0.31
COPS4-202ENST00000503682 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
COPS4-202ENST00000503682 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
COPS4-202ENST00000503682 KIF21BO75037 1637 aa16.98■□□□□ 0.31
COPS4-202ENST00000503682 ADRA2BP18089 450 aa16.97■□□□□ 0.31
COPS4-202ENST00000503682 PPRC1Q5VV67 1664 aaKnown RBP16.96■□□□□ 0.31
COPS4-202ENST00000503682 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
COPS4-202ENST00000503682 GLI2P10070 1586 aa16.94■□□□□ 0.3
COPS4-202ENST00000503682 KDM6BO15054 1643 aa16.93■□□□□ 0.3
COPS4-202ENST00000503682 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
COPS4-202ENST00000503682 KCNH8Q96L42 1107 aa16.91■□□□□ 0.3
COPS4-202ENST00000503682 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
COPS4-202ENST00000503682 MAP3K4Q9Y6R4 1608 aa16.91■□□□□ 0.3
COPS4-202ENST00000503682 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
COPS4-202ENST00000503682 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
COPS4-202ENST00000503682 ATP10BO94823 1461 aa16.88■□□□□ 0.29
COPS4-202ENST00000503682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
COPS4-202ENST00000503682 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
COPS4-202ENST00000503682 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
COPS4-202ENST00000503682 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
COPS4-202ENST00000503682 NUP153P49790 1475 aaKnown RBP16.81■□□□□ 0.28
COPS4-202ENST00000503682 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
COPS4-202ENST00000503682 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
COPS4-202ENST00000503682 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.28
COPS4-202ENST00000503682 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.27
COPS4-202ENST00000503682 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
COPS4-202ENST00000503682 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
COPS4-202ENST00000503682 CDK13Q14004 1512 aaKnown RBP16.73■□□□□ 0.27
COPS4-202ENST00000503682 ABCA9Q8IUA7 1624 aa16.73■□□□□ 0.27
COPS4-202ENST00000503682 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
COPS4-202ENST00000503682 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
COPS4-202ENST00000503682 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
COPS4-202ENST00000503682 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
COPS4-202ENST00000503682 HECW1Q76N89 1606 aa16.64■□□□□ 0.26
COPS4-202ENST00000503682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
COPS4-202ENST00000503682 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
COPS4-202ENST00000503682 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
COPS4-202ENST00000503682 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
COPS4-202ENST00000503682 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
COPS4-202ENST00000503682 ADGRL1O94910 1474 aa16.59■□□□□ 0.25
COPS4-202ENST00000503682 KIF14Q15058 1648 aa16.57■□□□□ 0.24
COPS4-202ENST00000503682 NEO1Q92859 1461 aa16.56■□□□□ 0.24
COPS4-202ENST00000503682 CLIP1P30622 1438 aa16.56■□□□□ 0.24
COPS4-202ENST00000503682 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
COPS4-202ENST00000503682 FANCAO15360 1455 aa16.54■□□□□ 0.24
COPS4-202ENST00000503682 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
COPS4-202ENST00000503682 MYO5CQ9NQX4 1742 aa16.52■□□□□ 0.24
COPS4-202ENST00000503682 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.24
COPS4-202ENST00000503682 PHLDB1Q86UU1 1377 aa16.52■□□□□ 0.23
COPS4-202ENST00000503682 RICTORQ6R327 1708 aa16.52■□□□□ 0.23
COPS4-202ENST00000503682 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
COPS4-202ENST00000503682 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
COPS4-202ENST00000503682 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
COPS4-202ENST00000503682 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
COPS4-202ENST00000503682 CFAP74Q9C0B2 1584 aa16.5■□□□□ 0.23
COPS4-202ENST00000503682 PLCH2O75038 1416 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms