RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 FAM69CQ0P6D2 419 aa28.32■■■□□ 2.12
DDR1-250ENST00000503628 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
DDR1-250ENST00000503628 ABCC10Q5T3U5 1492 aa28.27■■■□□ 2.12
DDR1-250ENST00000503628 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
DDR1-250ENST00000503628 MAPKBP1O60336 1514 aa28.2■■■□□ 2.1
DDR1-250ENST00000503628 DIP2BQ9P265 1576 aa28.17■■■□□ 2.1
DDR1-250ENST00000503628 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
DDR1-250ENST00000503628 KDM4FA0A1W2PPD8 638 aa28.09■■■□□ 2.09
DDR1-250ENST00000503628 KDM6BO15054 1643 aa28.07■■■□□ 2.08
DDR1-250ENST00000503628 TSPOAP1O95153 1857 aa28.07■■■□□ 2.08
DDR1-250ENST00000503628 KIAA0586Q9BVV6 1533 aa28.06■■■□□ 2.08
DDR1-250ENST00000503628 IGF1RP08069 1367 aa28.01■■■□□ 2.07
DDR1-250ENST00000503628 TTBK1Q5TCY1 1321 aaPredicted RBP27.92■■■□□ 2.06
DDR1-250ENST00000503628 PTPRGP23470 1445 aa27.92■■■□□ 2.06
DDR1-250ENST00000503628 CUL7Q14999 1698 aa27.92■■■□□ 2.06
DDR1-250ENST00000503628 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
DDR1-250ENST00000503628 TNIKQ9UKE5 1360 aa27.82■■■□□ 2.04
DDR1-250ENST00000503628 ABCC2Q92887 1545 aa27.82■■■□□ 2.04
DDR1-250ENST00000503628 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
DDR1-250ENST00000503628 CARMIL2Q6F5E8 1435 aa27.8■■■□□ 2.04
DDR1-250ENST00000503628 ASXL2Q76L83 1435 aa27.8■■■□□ 2.04
DDR1-250ENST00000503628 PPRC1Q5VV67 1664 aaKnown RBP27.78■■■□□ 2.04
DDR1-250ENST00000503628 ILDR1Q86SU0 546 aaPredicted RBP27.77■■■□□ 2.04
DDR1-250ENST00000503628 PLB1Q6P1J6 1458 aa27.76■■■□□ 2.04
DDR1-250ENST00000503628 GLI2P10070 1586 aa27.75■■■□□ 2.03
DDR1-250ENST00000503628 UHRF1BP1LA0JNW5 1464 aa27.7■■■□□ 2.03
DDR1-250ENST00000503628 IQGAP2Q13576 1575 aa27.7■■■□□ 2.03
DDR1-250ENST00000503628 ADGRL1O94910 1474 aa27.69■■■□□ 2.02
DDR1-250ENST00000503628 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
DDR1-250ENST00000503628 COL17A1Q9UMD9 1497 aaPredicted RBP27.66■■■□□ 2.02
DDR1-250ENST00000503628 DISP1Q96F81 1524 aa27.63■■■□□ 2.01
DDR1-250ENST00000503628 EPRSP07814 1512 aaKnown RBP27.62■■■□□ 2.01
DDR1-250ENST00000503628 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
DDR1-250ENST00000503628 KDM5BQ9UGL1 1544 aa27.59■■■□□ 2.01
DDR1-250ENST00000503628 ZCCHC11Q5TAX3 1644 aaKnown RBP27.55■■■□□ 2
DDR1-250ENST00000503628 TEX14Q8IWB6 1497 aa27.54■■■□□ 2
DDR1-250ENST00000503628 UGGT2Q9NYU1 1516 aa27.51■■□□□ 1.99
DDR1-250ENST00000503628 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
DDR1-250ENST00000503628 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
DDR1-250ENST00000503628 KIAA0556O60303 1618 aa27.46■■□□□ 1.99
DDR1-250ENST00000503628 WDR7Q9Y4E6 1490 aa27.42■■□□□ 1.98
DDR1-250ENST00000503628 KCNH8Q96L42 1107 aa27.35■■□□□ 1.97
DDR1-250ENST00000503628 CD109Q6YHK3 1445 aa27.34■■□□□ 1.97
DDR1-250ENST00000503628 MAGI3Q5TCQ9 1506 aa27.31■■□□□ 1.96
DDR1-250ENST00000503628 CFAP43Q8NDM7 1665 aa27.3■■□□□ 1.96
DDR1-250ENST00000503628 CTTNBP2Q8WZ74 1663 aa27.27■■□□□ 1.96
DDR1-250ENST00000503628 ABCA8O94911 1581 aa27.25■■□□□ 1.95
DDR1-250ENST00000503628 GOLGA3Q08378 1498 aa27.24■■□□□ 1.95
DDR1-250ENST00000503628 KIF21BO75037 1637 aa27.19■■□□□ 1.94
DDR1-250ENST00000503628 ARAP3Q8WWN8 1544 aa27.12■■□□□ 1.93
DDR1-250ENST00000503628 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
DDR1-250ENST00000503628 P3H3Q8IVL6 736 aa27.06■■□□□ 1.92
DDR1-250ENST00000503628 ATP10BO94823 1461 aa27.06■■□□□ 1.92
DDR1-250ENST00000503628 FBXO41Q8TF61 875 aa27.05■■□□□ 1.92
DDR1-250ENST00000503628 PRXQ9BXM0 1461 aa27.05■■□□□ 1.92
DDR1-250ENST00000503628 FAM9AQ8IZU1 332 aaPredicted RBP27.04■■□□□ 1.92
DDR1-250ENST00000503628 RAPGEF3O95398 923 aa27.01■■□□□ 1.91
DDR1-250ENST00000503628 ADAMTSL3P82987 1691 aa27.01■■□□□ 1.91
DDR1-250ENST00000503628 PTPRMP28827 1452 aa27■■□□□ 1.91
DDR1-250ENST00000503628 PHLDB1Q86UU1 1377 aa27■■□□□ 1.91
DDR1-250ENST00000503628 ABCA9Q8IUA7 1624 aa26.99■■□□□ 1.91
DDR1-250ENST00000503628 NEO1Q92859 1461 aa26.91■■□□□ 1.9
DDR1-250ENST00000503628 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
DDR1-250ENST00000503628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.89■■□□□ 1.9
DDR1-250ENST00000503628 HNRNPUL2Q1KMD3 747 aaKnown RBP26.89■■□□□ 1.9
DDR1-250ENST00000503628 BCORL1Q5H9F3 1711 aa26.89■■□□□ 1.9
DDR1-250ENST00000503628 FRMPD1Q5SYB0 1578 aa26.86■■□□□ 1.89
DDR1-250ENST00000503628 RAPGEF6Q8TEU7 1601 aa26.86■■□□□ 1.89
DDR1-250ENST00000503628 MADDQ8WXG6 1647 aa26.86■■□□□ 1.89
DDR1-250ENST00000503628 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
DDR1-250ENST00000503628 PCF11O94913 1555 aaKnown RBP26.83■■□□□ 1.89
DDR1-250ENST00000503628 LMTK3Q96Q04 1460 aa26.8■■□□□ 1.88
DDR1-250ENST00000503628 NUP153P49790 1475 aaKnown RBP26.76■■□□□ 1.87
DDR1-250ENST00000503628 RIMS1Q86UR5 1692 aaKnown RBP26.76■■□□□ 1.87
DDR1-250ENST00000503628 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
DDR1-250ENST00000503628 RANGAP1P46060 587 aaPredicted RBP26.74■■□□□ 1.87
DDR1-250ENST00000503628 DENND4BO75064 1496 aaPredicted RBP26.74■■□□□ 1.87
DDR1-250ENST00000503628 ARHGEF40Q8TER5 1519 aa26.73■■□□□ 1.87
DDR1-250ENST00000503628 RICTORQ6R327 1708 aa26.72■■□□□ 1.87
DDR1-250ENST00000503628 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
DDR1-250ENST00000503628 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
DDR1-250ENST00000503628 HSPA2P54652 639 aa26.7■■□□□ 1.86
DDR1-250ENST00000503628 PLPPR3Q6T4P5 718 aa26.7■■□□□ 1.86
DDR1-250ENST00000503628 FHOD3Q2V2M9 1422 aa26.67■■□□□ 1.86
DDR1-250ENST00000503628 FANCAO15360 1455 aa26.66■■□□□ 1.86
DDR1-250ENST00000503628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.64■■□□□ 1.856e-7■■■■□ 21.9
DDR1-250ENST00000503628 POGZQ7Z3K3 1410 aa26.63■■□□□ 1.85
DDR1-250ENST00000503628 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
DDR1-250ENST00000503628 SIGLEC1Q9BZZ2 1709 aa26.61■■□□□ 1.85
DDR1-250ENST00000503628 YEATS2Q9ULM3 1422 aa26.6■■□□□ 1.85
DDR1-250ENST00000503628 ZMYM4Q5VZL5 1548 aa26.59■■□□□ 1.85
DDR1-250ENST00000503628 MLECQ14165 292 aa26.58■■□□□ 1.85
DDR1-250ENST00000503628 ZFYVE16Q7Z3T8 1539 aa26.58■■□□□ 1.85
DDR1-250ENST00000503628 TTC37Q6PGP7 1564 aa26.58■■□□□ 1.85
DDR1-250ENST00000503628 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
DDR1-250ENST00000503628 CERKQ8TCT0 537 aa26.55■■□□□ 1.84
DDR1-250ENST00000503628 MAGI2Q86UL8 1455 aa26.53■■□□□ 1.84
DDR1-250ENST00000503628 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
DDR1-250ENST00000503628 FER1L4A9Z1Z3 1794 aa26.51■■□□□ 1.83
DDR1-250ENST00000503628 SCAPERQ9BY12 1400 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms