RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 CHIC1Q5VXU3 224 aa29.1■■■□□ 2.25
CLDND1-209ENST00000503621 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
CLDND1-209ENST00000503621 ARAP1Q96P48 1450 aa29.04■■■□□ 2.24
CLDND1-209ENST00000503621 JPH4Q96JJ6 628 aa29.01■■■□□ 2.23
CLDND1-209ENST00000503621 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
CLDND1-209ENST00000503621 PRG4Q92954 1404 aaPredicted RBP28.9■■■□□ 2.22
CLDND1-209ENST00000503621 IQGAP2Q13576 1575 aa28.88■■■□□ 2.21
CLDND1-209ENST00000503621 CYB5RLQ6IPT4 315 aa28.88■■■□□ 2.21
CLDND1-209ENST00000503621 ERCC6L2Q5T890 1561 aa28.85■■■□□ 2.21
CLDND1-209ENST00000503621 UGGT2Q9NYU1 1516 aa28.82■■■□□ 2.2
CLDND1-209ENST00000503621 CARMIL2Q6F5E8 1435 aa28.77■■■□□ 2.2
CLDND1-209ENST00000503621 CTTNBP2Q8WZ74 1663 aa28.77■■■□□ 2.2
CLDND1-209ENST00000503621 KIF21BO75037 1637 aa28.76■■■□□ 2.19
CLDND1-209ENST00000503621 DISP1Q96F81 1524 aa28.69■■■□□ 2.18
CLDND1-209ENST00000503621 TNIKQ9UKE5 1360 aa28.67■■■□□ 2.18
CLDND1-209ENST00000503621 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
CLDND1-209ENST00000503621 PTPRGP23470 1445 aa28.6■■■□□ 2.17
CLDND1-209ENST00000503621 KIAA0556O60303 1618 aa28.59■■■□□ 2.17
CLDND1-209ENST00000503621 UHRF1BP1LA0JNW5 1464 aa28.53■■■□□ 2.16
CLDND1-209ENST00000503621 FAM9AQ8IZU1 332 aaPredicted RBP28.52■■■□□ 2.16
CLDND1-209ENST00000503621 SAMD9Q5K651 1589 aa28.47■■■□□ 2.15
CLDND1-209ENST00000503621 ADCY10Q96PN6 1610 aa28.47■■■□□ 2.15
CLDND1-209ENST00000503621 UACAQ9BZF9 1416 aa28.44■■■□□ 2.14
CLDND1-209ENST00000503621 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
CLDND1-209ENST00000503621 EFCAB5A4FU69 1503 aa28.4■■■□□ 2.14
CLDND1-209ENST00000503621 ABCC2Q92887 1545 aa28.4■■■□□ 2.14
CLDND1-209ENST00000503621 NPM1P06748 294 aaKnown RBP eCLIP28.38■■■□□ 2.13
CLDND1-209ENST00000503621 KDM5BQ9UGL1 1544 aa28.35■■■□□ 2.13
CLDND1-209ENST00000503621 ABCA8O94911 1581 aa28.33■■■□□ 2.13
CLDND1-209ENST00000503621 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
CLDND1-209ENST00000503621 ABCC10Q5T3U5 1492 aa28.24■■■□□ 2.11
CLDND1-209ENST00000503621 PLB1Q6P1J6 1458 aa28.24■■■□□ 2.11
CLDND1-209ENST00000503621 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.1
CLDND1-209ENST00000503621 ARHGAP35Q9NRY4 1499 aa28.15■■■□□ 2.1
CLDND1-209ENST00000503621 ZCCHC11Q5TAX3 1644 aaKnown RBP28.14■■■□□ 2.1
CLDND1-209ENST00000503621 ASXL2Q76L83 1435 aa28.14■■■□□ 2.1
CLDND1-209ENST00000503621 DIP2BQ9P265 1576 aa28.13■■■□□ 2.09
CLDND1-209ENST00000503621 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
CLDND1-209ENST00000503621 RAPGEF6Q8TEU7 1601 aa28.13■■■□□ 2.09
CLDND1-209ENST00000503621 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
CLDND1-209ENST00000503621 KIF13AQ9H1H9 1805 aa28.13■■■□□ 2.09
CLDND1-209ENST00000503621 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
CLDND1-209ENST00000503621 GLI2P10070 1586 aa28.11■■■□□ 2.09
CLDND1-209ENST00000503621 P3H3Q8IVL6 736 aa28.11■■■□□ 2.09
CLDND1-209ENST00000503621 ATP10BO94823 1461 aa28.07■■■□□ 2.08
CLDND1-209ENST00000503621 WDR7Q9Y4E6 1490 aa28.05■■■□□ 2.08
CLDND1-209ENST00000503621 NUP153P49790 1475 aaKnown RBP28.04■■■□□ 2.08
CLDND1-209ENST00000503621 FAM69CQ0P6D2 419 aa28.02■■■□□ 2.08
CLDND1-209ENST00000503621 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
CLDND1-209ENST00000503621 CLIP1P30622 1438 aa27.97■■■□□ 2.07
CLDND1-209ENST00000503621 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
CLDND1-209ENST00000503621 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
CLDND1-209ENST00000503621 HECW1Q76N89 1606 aa27.91■■■□□ 2.06
CLDND1-209ENST00000503621 MAP3K4Q9Y6R4 1608 aa27.9■■■□□ 2.06
CLDND1-209ENST00000503621 CASKIN1Q8WXD9 1431 aa27.89■■■□□ 2.06
CLDND1-209ENST00000503621 CFAP43Q8NDM7 1665 aa27.84■■■□□ 2.05
CLDND1-209ENST00000503621 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
CLDND1-209ENST00000503621 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.04
CLDND1-209ENST00000503621 MAGI3Q5TCQ9 1506 aa27.82■■■□□ 2.04
CLDND1-209ENST00000503621 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
CLDND1-209ENST00000503621 TEX14Q8IWB6 1497 aa27.81■■■□□ 2.04
CLDND1-209ENST00000503621 ABCA9Q8IUA7 1624 aa27.8■■■□□ 2.04
CLDND1-209ENST00000503621 PPRC1Q5VV67 1664 aaKnown RBP27.79■■■□□ 2.04
CLDND1-209ENST00000503621 CCDC18Q5T9S5 1454 aa27.79■■■□□ 2.04
CLDND1-209ENST00000503621 CDK11AQ9UQ88 783 aaPredicted RBP27.77■■■□□ 2.04
CLDND1-209ENST00000503621 CD109Q6YHK3 1445 aa27.75■■■□□ 2.03
CLDND1-209ENST00000503621 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
CLDND1-209ENST00000503621 PHLDB1Q86UU1 1377 aa27.73■■■□□ 2.03
CLDND1-209ENST00000503621 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
CLDND1-209ENST00000503621 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
CLDND1-209ENST00000503621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.71■■■□□ 2.03
CLDND1-209ENST00000503621 HNRNPUL2Q1KMD3 747 aaKnown RBP27.71■■■□□ 2.03
CLDND1-209ENST00000503621 KCNH8Q96L42 1107 aa27.7■■■□□ 2.02
CLDND1-209ENST00000503621 TSPOAP1O95153 1857 aa27.68■■■□□ 2.02
CLDND1-209ENST00000503621 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
CLDND1-209ENST00000503621 LRRIQ1Q96JM4 1722 aa27.67■■■□□ 2.02
CLDND1-209ENST00000503621 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
CLDND1-209ENST00000503621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.62■■■□□ 2.01
CLDND1-209ENST00000503621 KDM6BO15054 1643 aa27.62■■■□□ 2.01
CLDND1-209ENST00000503621 NEO1Q92859 1461 aa27.62■■■□□ 2.01
CLDND1-209ENST00000503621 ARAP3Q8WWN8 1544 aa27.62■■■□□ 2.01
CLDND1-209ENST00000503621 VPS8Q8N3P4 1428 aa27.58■■■□□ 2.01
CLDND1-209ENST00000503621 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
CLDND1-209ENST00000503621 KIF14Q15058 1648 aa27.55■■■□□ 2
CLDND1-209ENST00000503621 PLCH2O75038 1416 aa27.53■■■□□ 2
CLDND1-209ENST00000503621 CFAP74Q9C0B2 1584 aa27.52■■■□□ 2
CLDND1-209ENST00000503621 MAP3K1Q13233 1512 aa27.51■■■□□ 2
CLDND1-209ENST00000503621 COL17A1Q9UMD9 1497 aaPredicted RBP27.51■■■□□ 2
CLDND1-209ENST00000503621 TTC37Q6PGP7 1564 aa27.51■■□□□ 1.99
CLDND1-209ENST00000503621 FANCAO15360 1455 aa27.45■■□□□ 1.99
CLDND1-209ENST00000503621 MYO5CQ9NQX4 1742 aa27.44■■□□□ 1.98
CLDND1-209ENST00000503621 EHBP1L1Q8N3D4 1523 aa27.41■■□□□ 1.98
CLDND1-209ENST00000503621 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
CLDND1-209ENST00000503621 MTUS2Q5JR59 1369 aa27.38■■□□□ 1.97
CLDND1-209ENST00000503621 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
CLDND1-209ENST00000503621 TIAM1Q13009 1591 aa27.38■■□□□ 1.97
CLDND1-209ENST00000503621 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
CLDND1-209ENST00000503621 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
CLDND1-209ENST00000503621 CDC42BPBQ9Y5S2 1711 aa27.31■■□□□ 1.96
CLDND1-209ENST00000503621 GPATCH8Q9UKJ3 1502 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms