RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 FER1L4A9Z1Z3 1794 aa7.19□□□□□ -1.26
NDFIP1-202ENST00000503388 ZMYM4Q5VZL5 1548 aa7.19□□□□□ -1.26
NDFIP1-202ENST00000503388 IQGAP2Q13576 1575 aa7.19□□□□□ -1.26
NDFIP1-202ENST00000503388 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
NDFIP1-202ENST00000503388 ABCA8O94911 1581 aa7.18□□□□□ -1.26
NDFIP1-202ENST00000503388 MYT1Q01538 1121 aa7.17□□□□□ -1.26
NDFIP1-202ENST00000503388 DNAJC5BQ9UF47 199 aa7.17□□□□□ -1.26
NDFIP1-202ENST00000503388 CENPBP07199 599 aaPredicted RBP7.16□□□□□ -1.26
NDFIP1-202ENST00000503388 RICTORQ6R327 1708 aa7.16□□□□□ -1.26
NDFIP1-202ENST00000503388 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
NDFIP1-202ENST00000503388 PDS5BQ9NTI5 1447 aa7.16□□□□□ -1.26
NDFIP1-202ENST00000503388 CROCC2H7BZ55 1655 aa7.15□□□□□ -1.26
NDFIP1-202ENST00000503388 CFAP74Q9C0B2 1584 aa7.15□□□□□ -1.26
NDFIP1-202ENST00000503388 DIP2BQ9P265 1576 aa7.15□□□□□ -1.26
NDFIP1-202ENST00000503388 FANCD2Q9BXW9 1451 aa7.14□□□□□ -1.27
NDFIP1-202ENST00000503388 FRMPD1Q5SYB0 1578 aa7.14□□□□□ -1.27
NDFIP1-202ENST00000503388 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
NDFIP1-202ENST00000503388 POLA1P09884 1462 aaPredicted RBP7.12□□□□□ -1.27
NDFIP1-202ENST00000503388 CAMSAP2Q08AD1 1489 aa7.11□□□□□ -1.27
NDFIP1-202ENST00000503388 LAMC1P11047 1609 aa7.09□□□□□ -1.27
NDFIP1-202ENST00000503388 ADAMTSL3P82987 1691 aa7.09□□□□□ -1.27
NDFIP1-202ENST00000503388 ARHGEF11O15085 1522 aa7.09□□□□□ -1.28
NDFIP1-202ENST00000503388 DEPDC5O75140 1603 aa7.08□□□□□ -1.28
NDFIP1-202ENST00000503388 NEURL4Q96JN8 1562 aa7.08□□□□□ -1.28
NDFIP1-202ENST00000503388 KDM6BO15054 1643 aa7.08□□□□□ -1.28
NDFIP1-202ENST00000503388 KIF14Q15058 1648 aa7.08□□□□□ -1.28
NDFIP1-202ENST00000503388 CCER1Q8TC90 406 aaPredicted RBP7.07□□□□□ -1.28
NDFIP1-202ENST00000503388 SYNJ2O15056 1496 aa7.07□□□□□ -1.28
NDFIP1-202ENST00000503388 MAST1Q9Y2H9 1570 aa7.06□□□□□ -1.28
NDFIP1-202ENST00000503388 SIGLEC1Q9BZZ2 1709 aa7.05□□□□□ -1.28
NDFIP1-202ENST00000503388 ITSN2Q9NZM3 1697 aa7.04□□□□□ -1.28
NDFIP1-202ENST00000503388 WDR7Q9Y4E6 1490 aa7.04□□□□□ -1.28
NDFIP1-202ENST00000503388 ZCCHC11Q5TAX3 1644 aaKnown RBP7.04□□□□□ -1.28
NDFIP1-202ENST00000503388 MROH1Q8NDA8 1641 aa7.04□□□□□ -1.28
NDFIP1-202ENST00000503388 PLXNC1O60486 1568 aa7.04□□□□□ -1.28
NDFIP1-202ENST00000503388 PCGF6Q9BYE7 350 aa7.03□□□□□ -1.28
NDFIP1-202ENST00000503388 ZC3H13Q5T200 1668 aaKnown RBP7.03□□□□□ -1.28
NDFIP1-202ENST00000503388 KDM5CP41229 1560 aa7.03□□□□□ -1.28
NDFIP1-202ENST00000503388 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.29
NDFIP1-202ENST00000503388 EFCAB5A4FU69 1503 aa7.02□□□□□ -1.29
NDFIP1-202ENST00000503388 MAP3K1Q13233 1512 aa7.02□□□□□ -1.29
NDFIP1-202ENST00000503388 EIF2AK4Q9P2K8 1649 aaKnown RBP7.02□□□□□ -1.29
NDFIP1-202ENST00000503388 PTPN23Q9H3S7 1636 aa7.02□□□□□ -1.29
NDFIP1-202ENST00000503388 RIMS1Q86UR5 1692 aaKnown RBP7.01□□□□□ -1.29
NDFIP1-202ENST00000503388 RNF17Q9BXT8 1623 aaKnown RBP7□□□□□ -1.29
NDFIP1-202ENST00000503388 HRCP23327 699 aa7□□□□□ -1.29
NDFIP1-202ENST00000503388 ACIN1Q9UKV3 1341 aaKnown RBP6.99□□□□□ -1.29
NDFIP1-202ENST00000503388 HECW2Q9P2P5 1572 aa6.99□□□□□ -1.29
NDFIP1-202ENST00000503388 ADGBQ8N7X0 1667 aa6.99□□□□□ -1.29
NDFIP1-202ENST00000503388 TMEM131LA2VDJ0 1609 aa6.98□□□□□ -1.29
NDFIP1-202ENST00000503388 EEA1Q15075 1411 aa6.98□□□□□ -1.29
NDFIP1-202ENST00000503388 POTEDQ86YR6 584 aa6.98□□□□□ -1.29
NDFIP1-202ENST00000503388 RAPGEF6Q8TEU7 1601 aa6.98□□□□□ -1.29
NDFIP1-202ENST00000503388 AQRO60306 1485 aaKnown RBP eCLIP6.97□□□□□ -1.29
NDFIP1-202ENST00000503388 ABCC2Q92887 1545 aa6.97□□□□□ -1.29
NDFIP1-202ENST00000503388 PREX2Q70Z35 1606 aa6.97□□□□□ -1.29
NDFIP1-202ENST00000503388 ABCA6Q8N139 1617 aa6.97□□□□□ -1.29
NDFIP1-202ENST00000503388 GRIN2BQ13224 1484 aa6.96□□□□□ -1.29
NDFIP1-202ENST00000503388 ERCC6Q03468 1493 aa6.96□□□□□ -1.3
NDFIP1-202ENST00000503388 GRIN2AQ12879 1464 aa6.96□□□□□ -1.3
NDFIP1-202ENST00000503388 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
NDFIP1-202ENST00000503388 ARAP1Q96P48 1450 aa6.95□□□□□ -1.3
NDFIP1-202ENST00000503388 INO80Q9ULG1 1556 aaPredicted RBP6.95□□□□□ -1.3
NDFIP1-202ENST00000503388 TTC37Q6PGP7 1564 aa6.94□□□□□ -1.3
NDFIP1-202ENST00000503388 DISP1Q96F81 1524 aa6.94□□□□□ -1.3
NDFIP1-202ENST00000503388 USP54Q70EL1 1684 aa6.94□□□□□ -1.3
NDFIP1-202ENST00000503388 FGD5Q6ZNL6 1462 aa6.92□□□□□ -1.3
NDFIP1-202ENST00000503388 CDC42BPBQ9Y5S2 1711 aa6.92□□□□□ -1.3
NDFIP1-202ENST00000503388 SENP3Q9H4L4 574 aaPredicted RBP6.92□□□□□ -1.3
NDFIP1-202ENST00000503388 CDC42BPAQ5VT25 1732 aa6.92□□□□□ -1.3
NDFIP1-202ENST00000503388 MAGI3Q5TCQ9 1506 aa6.91□□□□□ -1.3
NDFIP1-202ENST00000503388 IFT172Q9UG01 1749 aa6.91□□□□□ -1.3
NDFIP1-202ENST00000503388 NEFLP07196 543 aa6.91□□□□□ -1.3
NDFIP1-202ENST00000503388 VWDEQ8N2E2 1590 aa6.91□□□□□ -1.3
NDFIP1-202ENST00000503388 CLSPNQ9HAW4 1339 aa6.91□□□□□ -1.3
NDFIP1-202ENST00000503388 IQGAP3Q86VI3 1631 aa6.9□□□□□ -1.3
NDFIP1-202ENST00000503388 SETD1AO15047 1707 aaKnown RBP6.88□□□□□ -1.31
NDFIP1-202ENST00000503388 MYO5CQ9NQX4 1742 aa6.88□□□□□ -1.31
NDFIP1-202ENST00000503388 LMTK3Q96Q04 1460 aa6.87□□□□□ -1.31
NDFIP1-202ENST00000503388 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
NDFIP1-202ENST00000503388 FHAD1B1AJZ9 1412 aa6.86□□□□□ -1.31
NDFIP1-202ENST00000503388 PRAG1Q86YV5 1406 aa6.86□□□□□ -1.31
NDFIP1-202ENST00000503388 ARHGEF40Q8TER5 1519 aa6.86□□□□□ -1.31
NDFIP1-202ENST00000503388 PIK3C2BO00750 1634 aa6.85□□□□□ -1.31
NDFIP1-202ENST00000503388 EPRSP07814 1512 aaKnown RBP6.85□□□□□ -1.31
NDFIP1-202ENST00000503388 COL24A1Q17RW2 1714 aa6.85□□□□□ -1.31
NDFIP1-202ENST00000503388 AGLP35573 1532 aa6.85□□□□□ -1.31
NDFIP1-202ENST00000503388 ARHGEF5Q12774 1597 aa6.83□□□□□ -1.32
NDFIP1-202ENST00000503388 SNAPC4Q5SXM2 1469 aa6.83□□□□□ -1.32
NDFIP1-202ENST00000503388 MAGI2Q86UL8 1455 aa6.83□□□□□ -1.32
NDFIP1-202ENST00000503388 CSRNP3Q8WYN3 585 aa6.81□□□□□ -1.32
NDFIP1-202ENST00000503388 ERCC6L2Q5T890 1561 aa6.81□□□□□ -1.32
NDFIP1-202ENST00000503388 IQSEC2Q5JU85 1478 aa6.81□□□□□ -1.32
NDFIP1-202ENST00000503388 PREX1Q8TCU6 1659 aa6.81□□□□□ -1.32
NDFIP1-202ENST00000503388 POLR1AO95602 1720 aaPredicted RBP6.81□□□□□ -1.32
NDFIP1-202ENST00000503388 MADDQ8WXG6 1647 aa6.8□□□□□ -1.32
NDFIP1-202ENST00000503388 CAMSAP1Q5T5Y3 1602 aa6.8□□□□□ -1.32
NDFIP1-202ENST00000503388 ERICH6Q7L0X2 663 aa6.79□□□□□ -1.32
NDFIP1-202ENST00000503388 HECW1Q76N89 1606 aa6.79□□□□□ -1.32
NDFIP1-202ENST00000503388 GCC2Q8IWJ2 1684 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms