RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 RAPGEF2Q9Y4G8 1499 aa36.84■■■■□ 3.49
UBE2D3-214ENST00000503282 SHROOM2Q13796 1616 aa36.82■■■■□ 3.49
UBE2D3-214ENST00000503282 KIAA0586Q9BVV6 1533 aa36.82■■■■□ 3.48
UBE2D3-214ENST00000503282 CSRNP3Q8WYN3 585 aa36.74■■■■□ 3.47
UBE2D3-214ENST00000503282 PRG4Q92954 1404 aaPredicted RBP36.74■■■■□ 3.47
UBE2D3-214ENST00000503282 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
UBE2D3-214ENST00000503282 EEA1Q15075 1411 aa36.72■■■■□ 3.47
UBE2D3-214ENST00000503282 PRXQ9BXM0 1461 aa36.68■■■■□ 3.46
UBE2D3-214ENST00000503282 FAM9AQ8IZU1 332 aaPredicted RBP36.65■■■■□ 3.46
UBE2D3-214ENST00000503282 IQGAP2Q13576 1575 aa36.58■■■■□ 3.45
UBE2D3-214ENST00000503282 CARMIL2Q6F5E8 1435 aa36.47■■■■□ 3.43
UBE2D3-214ENST00000503282 CTTNBP2Q8WZ74 1663 aa36.45■■■■□ 3.42
UBE2D3-214ENST00000503282 UGGT2Q9NYU1 1516 aa36.38■■■■□ 3.41
UBE2D3-214ENST00000503282 PTPRGP23470 1445 aa36.33■■■■□ 3.41
UBE2D3-214ENST00000503282 TTBK1Q5TCY1 1321 aaPredicted RBP36.33■■■■□ 3.41
UBE2D3-214ENST00000503282 TNIKQ9UKE5 1360 aa36.32■■■■□ 3.4
UBE2D3-214ENST00000503282 DISP1Q96F81 1524 aa36.32■■■■□ 3.4
UBE2D3-214ENST00000503282 KIF21BO75037 1637 aa36.29■■■■□ 3.4
UBE2D3-214ENST00000503282 TRHP20396 242 aaPredicted RBP36.25■■■■□ 3.39
UBE2D3-214ENST00000503282 GOLGA3Q08378 1498 aa36.23■■■■□ 3.39
UBE2D3-214ENST00000503282 KIAA0556O60303 1618 aa36.22■■■■□ 3.39
UBE2D3-214ENST00000503282 NPM1P06748 294 aaKnown RBP eCLIP36.2■■■■□ 3.39
UBE2D3-214ENST00000503282 EHMT2Q96KQ7 1210 aa36.19■■■■□ 3.38
UBE2D3-214ENST00000503282 UBTFP17480 764 aaKnown RBP36.14■■■■□ 3.38
UBE2D3-214ENST00000503282 ADCY10Q96PN6 1610 aa36.12■■■■□ 3.37
UBE2D3-214ENST00000503282 RANGAP1P46060 587 aaPredicted RBP36.08■■■■□ 3.37
UBE2D3-214ENST00000503282 P3H3Q8IVL6 736 aa36.06■■■■□ 3.36
UBE2D3-214ENST00000503282 UACAQ9BZF9 1416 aa36.05■■■■□ 3.36
UBE2D3-214ENST00000503282 UHRF1BP1LA0JNW5 1464 aa35.99■■■■□ 3.35
UBE2D3-214ENST00000503282 SAMD9Q5K651 1589 aa35.97■■■■□ 3.35
UBE2D3-214ENST00000503282 ABCC2Q92887 1545 aa35.95■■■■□ 3.35
UBE2D3-214ENST00000503282 MAPKBP1O60336 1514 aa35.91■■■■□ 3.34
UBE2D3-214ENST00000503282 PLB1Q6P1J6 1458 aa35.9■■■■□ 3.34
UBE2D3-214ENST00000503282 EFCAB5A4FU69 1503 aa35.83■■■■□ 3.33
UBE2D3-214ENST00000503282 ABCA8O94911 1581 aa35.82■■■■□ 3.32
UBE2D3-214ENST00000503282 KDM5BQ9UGL1 1544 aa35.82■■■■□ 3.32
UBE2D3-214ENST00000503282 FHOD3Q2V2M9 1422 aa35.8■■■■□ 3.32
UBE2D3-214ENST00000503282 FAM69CQ0P6D2 419 aa35.78■■■■□ 3.32
UBE2D3-214ENST00000503282 ABCC10Q5T3U5 1492 aa35.77■■■■□ 3.32
UBE2D3-214ENST00000503282 ASXL2Q76L83 1435 aa35.74■■■■□ 3.31
UBE2D3-214ENST00000503282 ZCCHC11Q5TAX3 1644 aaKnown RBP35.73■■■■□ 3.31
UBE2D3-214ENST00000503282 KIF13AQ9H1H9 1805 aa35.72■■■■□ 3.31
UBE2D3-214ENST00000503282 DIP2BQ9P265 1576 aa35.68■■■■□ 3.3
UBE2D3-214ENST00000503282 ARHGAP35Q9NRY4 1499 aa35.66■■■■□ 3.3
UBE2D3-214ENST00000503282 RAPGEF6Q8TEU7 1601 aa35.65■■■■□ 3.3
UBE2D3-214ENST00000503282 ARID3CA6NKF2 412 aa35.64■■■■□ 3.3
UBE2D3-214ENST00000503282 ATP10BO94823 1461 aa35.58■■■■□ 3.29
UBE2D3-214ENST00000503282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.56■■■■□ 3.28
UBE2D3-214ENST00000503282 HNRNPUL2Q1KMD3 747 aaKnown RBP35.56■■■■□ 3.28
UBE2D3-214ENST00000503282 FMN1Q68DA7 1419 aa35.56■■■■□ 3.28
UBE2D3-214ENST00000503282 WDR7Q9Y4E6 1490 aa35.54■■■■□ 3.28
UBE2D3-214ENST00000503282 NUP153P49790 1475 aaKnown RBP35.52■■■■□ 3.28
UBE2D3-214ENST00000503282 EPRSP07814 1512 aaKnown RBP35.51■■■■□ 3.27
UBE2D3-214ENST00000503282 GLI2P10070 1586 aa35.5■■■■□ 3.27
UBE2D3-214ENST00000503282 KCNH8Q96L42 1107 aa35.49■■■■□ 3.27
UBE2D3-214ENST00000503282 CLIP1P30622 1438 aa35.48■■■■□ 3.27
UBE2D3-214ENST00000503282 ATP1B4Q9UN42 357 aaPredicted RBP35.47■■■■□ 3.27
UBE2D3-214ENST00000503282 LOC105371045A0A1W2PR82 267 aa35.45■■■■□ 3.27
UBE2D3-214ENST00000503282 TSPOAP1O95153 1857 aa35.42■■■■□ 3.26
UBE2D3-214ENST00000503282 PLEKHD1A6NEE1 506 aa35.36■■■■□ 3.25
UBE2D3-214ENST00000503282 HECW1Q76N89 1606 aa35.34■■■■□ 3.25
UBE2D3-214ENST00000503282 MAP3K4Q9Y6R4 1608 aa35.32■■■■□ 3.25
UBE2D3-214ENST00000503282 CEP162Q5TB80 1403 aa35.31■■■■□ 3.24
UBE2D3-214ENST00000503282 CDK13Q14004 1512 aaKnown RBP35.27■■■■□ 3.24
UBE2D3-214ENST00000503282 CD109Q6YHK3 1445 aa35.26■■■■□ 3.24
UBE2D3-214ENST00000503282 CASKIN1Q8WXD9 1431 aa35.24■■■■□ 3.23
UBE2D3-214ENST00000503282 PPRC1Q5VV67 1664 aaKnown RBP35.24■■■■□ 3.23
UBE2D3-214ENST00000503282 CFAP43Q8NDM7 1665 aa35.24■■■■□ 3.23
UBE2D3-214ENST00000503282 CDK11AQ9UQ88 783 aaPredicted RBP35.23■■■■□ 3.23
UBE2D3-214ENST00000503282 TEX14Q8IWB6 1497 aa35.22■■■■□ 3.23
UBE2D3-214ENST00000503282 PCF11O94913 1555 aaKnown RBP35.19■■■■□ 3.22
UBE2D3-214ENST00000503282 KDM6BO15054 1643 aa35.15■■■■□ 3.22
UBE2D3-214ENST00000503282 ABCA9Q8IUA7 1624 aa35.15■■■■□ 3.22
UBE2D3-214ENST00000503282 MAGI3Q5TCQ9 1506 aa35.15■■■■□ 3.22
UBE2D3-214ENST00000503282 FYCO1Q9BQS8 1478 aa35.15■■■■□ 3.22
UBE2D3-214ENST00000503282 CCDC18Q5T9S5 1454 aa35.11■■■■□ 3.21
UBE2D3-214ENST00000503282 LRRIQ1Q96JM4 1722 aa35.11■■■■□ 3.21
UBE2D3-214ENST00000503282 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.01■■■■□ 3.26e-33■□□□□ 10.7
UBE2D3-214ENST00000503282 TROQ12816 1431 aaPredicted RBP35.01■■■■□ 3.2
UBE2D3-214ENST00000503282 COL17A1Q9UMD9 1497 aaPredicted RBP34.96■■■■□ 3.19
UBE2D3-214ENST00000503282 TTC37Q6PGP7 1564 aa34.94■■■■□ 3.18
UBE2D3-214ENST00000503282 PHLDB1Q86UU1 1377 aa34.93■■■■□ 3.18
UBE2D3-214ENST00000503282 KIF14Q15058 1648 aa34.92■■■■□ 3.18
UBE2D3-214ENST00000503282 NEO1Q92859 1461 aa34.9■■■■□ 3.18
UBE2D3-214ENST00000503282 VPS8Q8N3P4 1428 aa34.88■■■■□ 3.17
UBE2D3-214ENST00000503282 PLCH2O75038 1416 aa34.85■■■■□ 3.17
UBE2D3-214ENST00000503282 ARAP3Q8WWN8 1544 aa34.85■■■■□ 3.17
UBE2D3-214ENST00000503282 FANCAO15360 1455 aa34.84■■■■□ 3.17
UBE2D3-214ENST00000503282 MTUS2Q5JR59 1369 aa34.8■■■■□ 3.16
UBE2D3-214ENST00000503282 CFAP74Q9C0B2 1584 aa34.79■■■■□ 3.16
UBE2D3-214ENST00000503282 MYO5CQ9NQX4 1742 aa34.79■■■■□ 3.16
UBE2D3-214ENST00000503282 AKNAQ7Z591 1439 aa34.79■■■■□ 3.16
UBE2D3-214ENST00000503282 EFCAB2Q5VUJ9 269 aa34.77■■■■□ 3.16
UBE2D3-214ENST00000503282 RAPGEF3O95398 923 aa34.73■■■■□ 3.15
UBE2D3-214ENST00000503282 ARHGAP5Q13017 1502 aa34.7■■■■□ 3.14
UBE2D3-214ENST00000503282 DENND4BO75064 1496 aaPredicted RBP34.67■■■■□ 3.14
UBE2D3-214ENST00000503282 EHBP1L1Q8N3D4 1523 aa34.65■■■■□ 3.14
UBE2D3-214ENST00000503282 TIAM1Q13009 1591 aa34.65■■■■□ 3.14
UBE2D3-214ENST00000503282 ADGRL1O94910 1474 aa34.65■■■■□ 3.14
UBE2D3-214ENST00000503282 SCAPERQ9BY12 1400 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms