RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
TSPAN17-203ENST00000503030 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
TSPAN17-203ENST00000503030 KIAA0586Q9BVV6 1533 aa28.01■■■□□ 2.07
TSPAN17-203ENST00000503030 PRXQ9BXM0 1461 aa28.01■■■□□ 2.07
TSPAN17-203ENST00000503030 ARAP1Q96P48 1450 aa27.98■■■□□ 2.07
TSPAN17-203ENST00000503030 JPH4Q96JJ6 628 aa27.98■■■□□ 2.07
TSPAN17-203ENST00000503030 ERCC6L2Q5T890 1561 aa27.96■■■□□ 2.07
TSPAN17-203ENST00000503030 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
TSPAN17-203ENST00000503030 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
TSPAN17-203ENST00000503030 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
TSPAN17-203ENST00000503030 CTTNBP2Q8WZ74 1663 aa27.84■■■□□ 2.05
TSPAN17-203ENST00000503030 KIF21BO75037 1637 aa27.78■■■□□ 2.04
TSPAN17-203ENST00000503030 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
TSPAN17-203ENST00000503030 CARMIL2Q6F5E8 1435 aa27.73■■■□□ 2.03
TSPAN17-203ENST00000503030 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
TSPAN17-203ENST00000503030 TTBK1Q5TCY1 1321 aaPredicted RBP27.68■■■□□ 2.02
TSPAN17-203ENST00000503030 DISP1Q96F81 1524 aa27.67■■■□□ 2.02
TSPAN17-203ENST00000503030 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
TSPAN17-203ENST00000503030 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
TSPAN17-203ENST00000503030 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
TSPAN17-203ENST00000503030 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
TSPAN17-203ENST00000503030 PTPRGP23470 1445 aa27.6■■■□□ 2.01
TSPAN17-203ENST00000503030 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
TSPAN17-203ENST00000503030 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
TSPAN17-203ENST00000503030 ADCY10Q96PN6 1610 aa27.49■■□□□ 1.99
TSPAN17-203ENST00000503030 SAMD9Q5K651 1589 aa27.47■■□□□ 1.99
TSPAN17-203ENST00000503030 UACAQ9BZF9 1416 aa27.41■■□□□ 1.98
TSPAN17-203ENST00000503030 NPM1P06748 294 aaKnown RBP eCLIP27.41■■□□□ 1.98
TSPAN17-203ENST00000503030 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
TSPAN17-203ENST00000503030 EFCAB5A4FU69 1503 aa27.37■■□□□ 1.97
TSPAN17-203ENST00000503030 ABCC2Q92887 1545 aa27.36■■□□□ 1.97
TSPAN17-203ENST00000503030 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
TSPAN17-203ENST00000503030 PLB1Q6P1J6 1458 aa27.36■■□□□ 1.97
TSPAN17-203ENST00000503030 UHRF1BP1LA0JNW5 1464 aa27.35■■□□□ 1.97
TSPAN17-203ENST00000503030 ABCA8O94911 1581 aa27.31■■□□□ 1.96
TSPAN17-203ENST00000503030 ARHGAP35Q9NRY4 1499 aa27.27■■□□□ 1.96
TSPAN17-203ENST00000503030 MAPKBP1O60336 1514 aa27.26■■□□□ 1.95
TSPAN17-203ENST00000503030 KDM5BQ9UGL1 1544 aa27.23■■□□□ 1.95
TSPAN17-203ENST00000503030 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
TSPAN17-203ENST00000503030 ZCCHC11Q5TAX3 1644 aaKnown RBP27.22■■□□□ 1.95
TSPAN17-203ENST00000503030 RAPGEF6Q8TEU7 1601 aa27.2■■□□□ 1.95
TSPAN17-203ENST00000503030 ARID3CA6NKF2 412 aa27.2■■□□□ 1.94
TSPAN17-203ENST00000503030 CLIP1P30622 1438 aa27.16■■□□□ 1.94
TSPAN17-203ENST00000503030 ASXL2Q76L83 1435 aa27.16■■□□□ 1.94
TSPAN17-203ENST00000503030 ABCC10Q5T3U5 1492 aa27.13■■□□□ 1.93
TSPAN17-203ENST00000503030 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
TSPAN17-203ENST00000503030 KIF13AQ9H1H9 1805 aa27.11■■□□□ 1.93
TSPAN17-203ENST00000503030 FAM69CQ0P6D2 419 aa27.11■■□□□ 1.93
TSPAN17-203ENST00000503030 DIP2BQ9P265 1576 aa27.1■■□□□ 1.93
TSPAN17-203ENST00000503030 NUP153P49790 1475 aaKnown RBP27.09■■□□□ 1.93
TSPAN17-203ENST00000503030 ATP10BO94823 1461 aa27.08■■□□□ 1.93
TSPAN17-203ENST00000503030 CEP162Q5TB80 1403 aa27.07■■□□□ 1.92
TSPAN17-203ENST00000503030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
TSPAN17-203ENST00000503030 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
TSPAN17-203ENST00000503030 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
TSPAN17-203ENST00000503030 WDR7Q9Y4E6 1490 aa27.04■■□□□ 1.92
TSPAN17-203ENST00000503030 HECW1Q76N89 1606 aa27■■□□□ 1.91
TSPAN17-203ENST00000503030 EPRSP07814 1512 aaKnown RBP27■■□□□ 1.91
TSPAN17-203ENST00000503030 KCNH8Q96L42 1107 aa26.98■■□□□ 1.91
TSPAN17-203ENST00000503030 PCF11O94913 1555 aaKnown RBP26.96■■□□□ 1.91
TSPAN17-203ENST00000503030 CDK13Q14004 1512 aaKnown RBP26.95■■□□□ 1.91
TSPAN17-203ENST00000503030 GLI2P10070 1586 aa26.94■■□□□ 1.9
TSPAN17-203ENST00000503030 TSPOAP1O95153 1857 aa26.93■■□□□ 1.9
TSPAN17-203ENST00000503030 CASKIN1Q8WXD9 1431 aa26.92■■□□□ 1.9
TSPAN17-203ENST00000503030 PLEKHD1A6NEE1 506 aa26.88■■□□□ 1.89
TSPAN17-203ENST00000503030 FYCO1Q9BQS8 1478 aa26.87■■□□□ 1.89
TSPAN17-203ENST00000503030 LRRIQ1Q96JM4 1722 aa26.86■■□□□ 1.89
TSPAN17-203ENST00000503030 MAP3K4Q9Y6R4 1608 aa26.85■■□□□ 1.89
TSPAN17-203ENST00000503030 CCDC18Q5T9S5 1454 aa26.81■■□□□ 1.88
TSPAN17-203ENST00000503030 PPRC1Q5VV67 1664 aaKnown RBP26.79■■□□□ 1.88
TSPAN17-203ENST00000503030 CFAP43Q8NDM7 1665 aa26.79■■□□□ 1.88
TSPAN17-203ENST00000503030 CDK11AQ9UQ88 783 aaPredicted RBP26.79■■□□□ 1.88
TSPAN17-203ENST00000503030 CD109Q6YHK3 1445 aa26.78■■□□□ 1.88
TSPAN17-203ENST00000503030 ABCA9Q8IUA7 1624 aa26.76■■□□□ 1.87
TSPAN17-203ENST00000503030 TEX14Q8IWB6 1497 aa26.72■■□□□ 1.87
TSPAN17-203ENST00000503030 VPS8Q8N3P4 1428 aa26.72■■□□□ 1.87
TSPAN17-203ENST00000503030 TROQ12816 1431 aaPredicted RBP26.71■■□□□ 1.87
TSPAN17-203ENST00000503030 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
TSPAN17-203ENST00000503030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.68■■□□□ 1.86
TSPAN17-203ENST00000503030 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
TSPAN17-203ENST00000503030 KDM6BO15054 1643 aa26.66■■□□□ 1.86
TSPAN17-203ENST00000503030 KIF14Q15058 1648 aa26.66■■□□□ 1.86
TSPAN17-203ENST00000503030 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.84
TSPAN17-203ENST00000503030 COL17A1Q9UMD9 1497 aaPredicted RBP26.54■■□□□ 1.84
TSPAN17-203ENST00000503030 TIAM1Q13009 1591 aa26.54■■□□□ 1.84
TSPAN17-203ENST00000503030 MYO5CQ9NQX4 1742 aa26.53■■□□□ 1.84
TSPAN17-203ENST00000503030 EHBP1L1Q8N3D4 1523 aa26.51■■□□□ 1.83
TSPAN17-203ENST00000503030 FANCAO15360 1455 aa26.51■■□□□ 1.83
TSPAN17-203ENST00000503030 NEO1Q92859 1461 aa26.51■■□□□ 1.83
TSPAN17-203ENST00000503030 PLCH2O75038 1416 aa26.51■■□□□ 1.83
TSPAN17-203ENST00000503030 CFAP74Q9C0B2 1584 aa26.48■■□□□ 1.83
TSPAN17-203ENST00000503030 PHLDB1Q86UU1 1377 aa26.47■■□□□ 1.83
TSPAN17-203ENST00000503030 ARHGAP5Q13017 1502 aa26.46■■□□□ 1.83
TSPAN17-203ENST00000503030 ARAP3Q8WWN8 1544 aa26.45■■□□□ 1.83
TSPAN17-203ENST00000503030 APLP2Q06481 763 aa26.45■■□□□ 1.82
TSPAN17-203ENST00000503030 AKNAQ7Z591 1439 aa26.45■■□□□ 1.82
TSPAN17-203ENST00000503030 EFCAB2Q5VUJ9 269 aa26.44■■□□□ 1.82
TSPAN17-203ENST00000503030 MAP3K1Q13233 1512 aa26.43■■□□□ 1.82
TSPAN17-203ENST00000503030 PREX2Q70Z35 1606 aa26.43■■□□□ 1.82
TSPAN17-203ENST00000503030 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms