RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
LSM3P4-201ENST00000502948 MAPKBP1O60336 1514 aa10.82□□□□□ -0.68
LSM3P4-201ENST00000502948 KIAA0586Q9BVV6 1533 aa10.81□□□□□ -0.68
LSM3P4-201ENST00000502948 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
LSM3P4-201ENST00000502948 IGF1RP08069 1367 aa10.79□□□□□ -0.68
LSM3P4-201ENST00000502948 ABCC10Q5T3U5 1492 aa10.77□□□□□ -0.69
LSM3P4-201ENST00000502948 ADCY10Q96PN6 1610 aa10.75□□□□□ -0.69
LSM3P4-201ENST00000502948 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
LSM3P4-201ENST00000502948 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
LSM3P4-201ENST00000502948 CARMIL1Q5VZK9 1371 aa10.7□□□□□ -0.7
LSM3P4-201ENST00000502948 CARMIL2Q6F5E8 1435 aa10.69□□□□□ -0.7
LSM3P4-201ENST00000502948 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
LSM3P4-201ENST00000502948 IQGAP2Q13576 1575 aa10.69□□□□□ -0.7
LSM3P4-201ENST00000502948 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
LSM3P4-201ENST00000502948 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
LSM3P4-201ENST00000502948 PTPRGP23470 1445 aa10.67□□□□□ -0.7
LSM3P4-201ENST00000502948 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
LSM3P4-201ENST00000502948 GLI2P10070 1586 aa10.66□□□□□ -0.7
LSM3P4-201ENST00000502948 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
LSM3P4-201ENST00000502948 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
LSM3P4-201ENST00000502948 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
LSM3P4-201ENST00000502948 RAPGEF2Q9Y4G8 1499 aa10.63□□□□□ -0.71
LSM3P4-201ENST00000502948 KDM6BO15054 1643 aa10.63□□□□□ -0.71
LSM3P4-201ENST00000502948 DISP1Q96F81 1524 aa10.63□□□□□ -0.71
LSM3P4-201ENST00000502948 KDM5BQ9UGL1 1544 aa10.62□□□□□ -0.71
LSM3P4-201ENST00000502948 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
LSM3P4-201ENST00000502948 PPRC1Q5VV67 1664 aaKnown RBP10.6□□□□□ -0.71
LSM3P4-201ENST00000502948 TSPOAP1O95153 1857 aa10.59□□□□□ -0.71
LSM3P4-201ENST00000502948 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
LSM3P4-201ENST00000502948 CTTNBP2Q8WZ74 1663 aa10.59□□□□□ -0.71
LSM3P4-201ENST00000502948 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
LSM3P4-201ENST00000502948 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
LSM3P4-201ENST00000502948 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
LSM3P4-201ENST00000502948 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
LSM3P4-201ENST00000502948 EPRSP07814 1512 aaKnown RBP10.55□□□□□ -0.72
LSM3P4-201ENST00000502948 TEX14Q8IWB6 1497 aa10.54□□□□□ -0.72
LSM3P4-201ENST00000502948 PRXQ9BXM0 1461 aa10.53□□□□□ -0.72
LSM3P4-201ENST00000502948 ABCA8O94911 1581 aa10.51□□□□□ -0.73
LSM3P4-201ENST00000502948 CFAP43Q8NDM7 1665 aa10.5□□□□□ -0.73
LSM3P4-201ENST00000502948 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
LSM3P4-201ENST00000502948 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
LSM3P4-201ENST00000502948 MAGI3Q5TCQ9 1506 aa10.48□□□□□ -0.73
LSM3P4-201ENST00000502948 COL17A1Q9UMD9 1497 aaPredicted RBP10.47□□□□□ -0.73
LSM3P4-201ENST00000502948 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
LSM3P4-201ENST00000502948 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
LSM3P4-201ENST00000502948 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
LSM3P4-201ENST00000502948 EEA1Q15075 1411 aa10.42□□□□□ -0.74
LSM3P4-201ENST00000502948 CD109Q6YHK3 1445 aa10.42□□□□□ -0.74
LSM3P4-201ENST00000502948 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
LSM3P4-201ENST00000502948 ARAP3Q8WWN8 1544 aa10.42□□□□□ -0.74
LSM3P4-201ENST00000502948 ADGRL1O94910 1474 aa10.42□□□□□ -0.74
LSM3P4-201ENST00000502948 ABCA9Q8IUA7 1624 aa10.4□□□□□ -0.74
LSM3P4-201ENST00000502948 ATP10BO94823 1461 aa10.38□□□□□ -0.75
LSM3P4-201ENST00000502948 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
LSM3P4-201ENST00000502948 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
LSM3P4-201ENST00000502948 NEO1Q92859 1461 aa10.36□□□□□ -0.75
LSM3P4-201ENST00000502948 CHIC1Q5VXU3 224 aa10.34□□□□□ -0.75
LSM3P4-201ENST00000502948 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
LSM3P4-201ENST00000502948 KIF21BO75037 1637 aa10.33□□□□□ -0.76
LSM3P4-201ENST00000502948 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
LSM3P4-201ENST00000502948 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
LSM3P4-201ENST00000502948 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
LSM3P4-201ENST00000502948 ADAMTSL3P82987 1691 aa10.3□□□□□ -0.76
LSM3P4-201ENST00000502948 CFAP74Q9C0B2 1584 aa10.3□□□□□ -0.76
LSM3P4-201ENST00000502948 RICTORQ6R327 1708 aa10.27□□□□□ -0.77
LSM3P4-201ENST00000502948 FRMPD1Q5SYB0 1578 aa10.26□□□□□ -0.77
LSM3P4-201ENST00000502948 BCORL1Q5H9F3 1711 aa10.25□□□□□ -0.77
LSM3P4-201ENST00000502948 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
LSM3P4-201ENST00000502948 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
LSM3P4-201ENST00000502948 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
LSM3P4-201ENST00000502948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.24□□□□□ -0.77
LSM3P4-201ENST00000502948 PLEKHD1A6NEE1 506 aa10.24□□□□□ -0.77
LSM3P4-201ENST00000502948 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
LSM3P4-201ENST00000502948 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
LSM3P4-201ENST00000502948 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
LSM3P4-201ENST00000502948 PTPRMP28827 1452 aa10.23□□□□□ -0.77
LSM3P4-201ENST00000502948 FMN1Q68DA7 1419 aa10.22□□□□□ -0.77
LSM3P4-201ENST00000502948 AKNAQ7Z591 1439 aa10.22□□□□□ -0.77
LSM3P4-201ENST00000502948 FANCAO15360 1455 aa10.22□□□□□ -0.77
LSM3P4-201ENST00000502948 RAPGEF3O95398 923 aa10.21□□□□□ -0.77
LSM3P4-201ENST00000502948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
LSM3P4-201ENST00000502948 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
LSM3P4-201ENST00000502948 TTC37Q6PGP7 1564 aa10.2□□□□□ -0.78
LSM3P4-201ENST00000502948 HECW1Q76N89 1606 aa10.2□□□□□ -0.78
LSM3P4-201ENST00000502948 PLCH2O75038 1416 aa10.19□□□□□ -0.78
LSM3P4-201ENST00000502948 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
LSM3P4-201ENST00000502948 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
LSM3P4-201ENST00000502948 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
LSM3P4-201ENST00000502948 MYO5CQ9NQX4 1742 aa10.18□□□□□ -0.78
LSM3P4-201ENST00000502948 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
LSM3P4-201ENST00000502948 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
LSM3P4-201ENST00000502948 PCF11O94913 1555 aaKnown RBP10.16□□□□□ -0.78
LSM3P4-201ENST00000502948 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
LSM3P4-201ENST00000502948 CDK11AQ9UQ88 783 aaPredicted RBP10.15□□□□□ -0.78
LSM3P4-201ENST00000502948 CDK13Q14004 1512 aaKnown RBP10.15□□□□□ -0.78
LSM3P4-201ENST00000502948 LMTK3Q96Q04 1460 aa10.14□□□□□ -0.79
LSM3P4-201ENST00000502948 RIMS1Q86UR5 1692 aaKnown RBP10.14□□□□□ -0.79
LSM3P4-201ENST00000502948 KIF14Q15058 1648 aa10.14□□□□□ -0.79
LSM3P4-201ENST00000502948 REREQ9P2R6 1566 aa10.14□□□□□ -0.79
LSM3P4-201ENST00000502948 KDM5CP41229 1560 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms