RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
UBE2D3-212ENST00000502563 RAPGEF2Q9Y4G8 1499 aa18.05■□□□□ 0.48
UBE2D3-212ENST00000502563 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
UBE2D3-212ENST00000502563 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
UBE2D3-212ENST00000502563 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
UBE2D3-212ENST00000502563 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
UBE2D3-212ENST00000502563 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
UBE2D3-212ENST00000502563 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
UBE2D3-212ENST00000502563 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
UBE2D3-212ENST00000502563 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
UBE2D3-212ENST00000502563 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
UBE2D3-212ENST00000502563 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
UBE2D3-212ENST00000502563 IQGAP2Q13576 1575 aa17.9■□□□□ 0.46
UBE2D3-212ENST00000502563 KIF21BO75037 1637 aa17.88■□□□□ 0.45
UBE2D3-212ENST00000502563 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
UBE2D3-212ENST00000502563 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
UBE2D3-212ENST00000502563 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
UBE2D3-212ENST00000502563 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
UBE2D3-212ENST00000502563 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
UBE2D3-212ENST00000502563 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
UBE2D3-212ENST00000502563 DISP1Q96F81 1524 aa17.77■□□□□ 0.43
UBE2D3-212ENST00000502563 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
UBE2D3-212ENST00000502563 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
UBE2D3-212ENST00000502563 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
UBE2D3-212ENST00000502563 TNIKQ9UKE5 1360 aa17.73■□□□□ 0.43
UBE2D3-212ENST00000502563 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
UBE2D3-212ENST00000502563 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
UBE2D3-212ENST00000502563 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
UBE2D3-212ENST00000502563 PTPRGP23470 1445 aa17.67■□□□□ 0.42
UBE2D3-212ENST00000502563 ADRA2BP18089 450 aa17.67■□□□□ 0.42
UBE2D3-212ENST00000502563 UHRF1BP1LA0JNW5 1464 aa17.65■□□□□ 0.42
UBE2D3-212ENST00000502563 EFCAB5A4FU69 1503 aa17.64■□□□□ 0.41
UBE2D3-212ENST00000502563 ADCY10Q96PN6 1610 aa17.6■□□□□ 0.41
UBE2D3-212ENST00000502563 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
UBE2D3-212ENST00000502563 ABCC2Q92887 1545 aa17.57■□□□□ 0.4
UBE2D3-212ENST00000502563 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
UBE2D3-212ENST00000502563 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-212ENST00000502563 ABCA8O94911 1581 aa17.54■□□□□ 0.4
UBE2D3-212ENST00000502563 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
UBE2D3-212ENST00000502563 NPM1P06748 294 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBE2D3-212ENST00000502563 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
UBE2D3-212ENST00000502563 PLB1Q6P1J6 1458 aa17.48■□□□□ 0.39
UBE2D3-212ENST00000502563 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
UBE2D3-212ENST00000502563 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
UBE2D3-212ENST00000502563 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
UBE2D3-212ENST00000502563 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
UBE2D3-212ENST00000502563 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-212ENST00000502563 CLIP1P30622 1438 aa17.38■□□□□ 0.37
UBE2D3-212ENST00000502563 ASXL2Q76L83 1435 aa17.38■□□□□ 0.37
UBE2D3-212ENST00000502563 NUP153P49790 1475 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-212ENST00000502563 DIP2BQ9P265 1576 aa17.38■□□□□ 0.37
UBE2D3-212ENST00000502563 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
UBE2D3-212ENST00000502563 GLI2P10070 1586 aa17.37■□□□□ 0.37
UBE2D3-212ENST00000502563 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-212ENST00000502563 ATP10BO94823 1461 aa17.36■□□□□ 0.37
UBE2D3-212ENST00000502563 WDR7Q9Y4E6 1490 aa17.36■□□□□ 0.37
UBE2D3-212ENST00000502563 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
UBE2D3-212ENST00000502563 HECW1Q76N89 1606 aa17.33■□□□□ 0.37
UBE2D3-212ENST00000502563 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
UBE2D3-212ENST00000502563 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
UBE2D3-212ENST00000502563 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
UBE2D3-212ENST00000502563 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
UBE2D3-212ENST00000502563 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
UBE2D3-212ENST00000502563 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-212ENST00000502563 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
UBE2D3-212ENST00000502563 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
UBE2D3-212ENST00000502563 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
UBE2D3-212ENST00000502563 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
UBE2D3-212ENST00000502563 PCF11O94913 1555 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-212ENST00000502563 CFAP43Q8NDM7 1665 aa17.23■□□□□ 0.35
UBE2D3-212ENST00000502563 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
UBE2D3-212ENST00000502563 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
UBE2D3-212ENST00000502563 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
UBE2D3-212ENST00000502563 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
UBE2D3-212ENST00000502563 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
UBE2D3-212ENST00000502563 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
UBE2D3-212ENST00000502563 CDK13Q14004 1512 aaKnown RBP17.18■□□□□ 0.34
UBE2D3-212ENST00000502563 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
UBE2D3-212ENST00000502563 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
UBE2D3-212ENST00000502563 PPRC1Q5VV67 1664 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-212ENST00000502563 TROQ12816 1431 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-212ENST00000502563 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
UBE2D3-212ENST00000502563 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
UBE2D3-212ENST00000502563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-212ENST00000502563 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-212ENST00000502563 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
UBE2D3-212ENST00000502563 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
UBE2D3-212ENST00000502563 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
UBE2D3-212ENST00000502563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBE2D3-212ENST00000502563 KCNH8Q96L42 1107 aa17.09■□□□□ 0.33
UBE2D3-212ENST00000502563 KIF14Q15058 1648 aa17.09■□□□□ 0.33
UBE2D3-212ENST00000502563 NEO1Q92859 1461 aa17.08■□□□□ 0.32
UBE2D3-212ENST00000502563 TSPOAP1O95153 1857 aa17.06■□□□□ 0.32
UBE2D3-212ENST00000502563 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-212ENST00000502563 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
UBE2D3-212ENST00000502563 PLCH2O75038 1416 aa17.04■□□□□ 0.32
UBE2D3-212ENST00000502563 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
UBE2D3-212ENST00000502563 KDM6BO15054 1643 aa17.03■□□□□ 0.32
UBE2D3-212ENST00000502563 EHBP1L1Q8N3D4 1523 aa17.03■□□□□ 0.32
UBE2D3-212ENST00000502563 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms