RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
UBE2D3-211ENST00000502404 SYNJ2O15056 1496 aa19.88■□□□□ 0.77
UBE2D3-211ENST00000502404 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
UBE2D3-211ENST00000502404 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
UBE2D3-211ENST00000502404 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
UBE2D3-211ENST00000502404 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
UBE2D3-211ENST00000502404 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
UBE2D3-211ENST00000502404 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
UBE2D3-211ENST00000502404 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
UBE2D3-211ENST00000502404 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
UBE2D3-211ENST00000502404 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
UBE2D3-211ENST00000502404 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
UBE2D3-211ENST00000502404 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
UBE2D3-211ENST00000502404 ZBTB22O15209 634 aa19.66■□□□□ 0.74
UBE2D3-211ENST00000502404 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
UBE2D3-211ENST00000502404 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
UBE2D3-211ENST00000502404 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
UBE2D3-211ENST00000502404 NUP160Q12769 1436 aa19.6■□□□□ 0.73
UBE2D3-211ENST00000502404 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
UBE2D3-211ENST00000502404 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
UBE2D3-211ENST00000502404 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
UBE2D3-211ENST00000502404 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
UBE2D3-211ENST00000502404 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
UBE2D3-211ENST00000502404 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
UBE2D3-211ENST00000502404 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
UBE2D3-211ENST00000502404 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
UBE2D3-211ENST00000502404 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBE2D3-211ENST00000502404 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
UBE2D3-211ENST00000502404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
UBE2D3-211ENST00000502404 IGF1RP08069 1367 aa19.35■□□□□ 0.69
UBE2D3-211ENST00000502404 KIAA0586Q9BVV6 1533 aa19.31■□□□□ 0.68
UBE2D3-211ENST00000502404 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
UBE2D3-211ENST00000502404 CUL7Q14999 1698 aa19.27■□□□□ 0.67
UBE2D3-211ENST00000502404 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
UBE2D3-211ENST00000502404 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
UBE2D3-211ENST00000502404 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-211ENST00000502404 ABCC10Q5T3U5 1492 aa19.2■□□□□ 0.66
UBE2D3-211ENST00000502404 CARMIL2Q6F5E8 1435 aa19.19■□□□□ 0.66
UBE2D3-211ENST00000502404 MAPKBP1O60336 1514 aa19.19■□□□□ 0.66
UBE2D3-211ENST00000502404 PTPRGP23470 1445 aa19.18■□□□□ 0.66
UBE2D3-211ENST00000502404 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
UBE2D3-211ENST00000502404 U3KPZ7 1027 aaPredicted RBP19.14■□□□□ 0.65
UBE2D3-211ENST00000502404 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
UBE2D3-211ENST00000502404 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
UBE2D3-211ENST00000502404 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
UBE2D3-211ENST00000502404 DIP2BQ9P265 1576 aa19.08■□□□□ 0.65
UBE2D3-211ENST00000502404 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
UBE2D3-211ENST00000502404 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
UBE2D3-211ENST00000502404 ABCC2Q92887 1545 aa19.03■□□□□ 0.64
UBE2D3-211ENST00000502404 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
UBE2D3-211ENST00000502404 UACAQ9BZF9 1416 aa19■□□□□ 0.63
UBE2D3-211ENST00000502404 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
UBE2D3-211ENST00000502404 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
UBE2D3-211ENST00000502404 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
UBE2D3-211ENST00000502404 KDM6BO15054 1643 aa18.97■□□□□ 0.63
UBE2D3-211ENST00000502404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.97■□□□□ 0.63
UBE2D3-211ENST00000502404 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
UBE2D3-211ENST00000502404 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
UBE2D3-211ENST00000502404 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
UBE2D3-211ENST00000502404 ATXN8OSP0DMR3 200 aa18.94■□□□□ 0.62
UBE2D3-211ENST00000502404 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
UBE2D3-211ENST00000502404 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
UBE2D3-211ENST00000502404 GLI2P10070 1586 aa18.91■□□□□ 0.62
UBE2D3-211ENST00000502404 SAMD1Q6SPF0 538 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-211ENST00000502404 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
UBE2D3-211ENST00000502404 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
UBE2D3-211ENST00000502404 KIAA0556O60303 1618 aa18.86■□□□□ 0.61
UBE2D3-211ENST00000502404 EPRSP07814 1512 aaKnown RBP18.84■□□□□ 0.61
UBE2D3-211ENST00000502404 KDM4FA0A1W2PPD8 638 aa18.84■□□□□ 0.61
UBE2D3-211ENST00000502404 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
UBE2D3-211ENST00000502404 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
UBE2D3-211ENST00000502404 ZCCHC11Q5TAX3 1644 aaKnown RBP18.79■□□□□ 0.6
UBE2D3-211ENST00000502404 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
UBE2D3-211ENST00000502404 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
UBE2D3-211ENST00000502404 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
UBE2D3-211ENST00000502404 MAP3K4Q9Y6R4 1608 aa18.75■□□□□ 0.59
UBE2D3-211ENST00000502404 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
UBE2D3-211ENST00000502404 PPRC1Q5VV67 1664 aaKnown RBP18.75■□□□□ 0.59
UBE2D3-211ENST00000502404 APLP2Q06481 763 aa18.72■□□□□ 0.59
UBE2D3-211ENST00000502404 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
UBE2D3-211ENST00000502404 ABCA8O94911 1581 aa18.71■□□□□ 0.59
UBE2D3-211ENST00000502404 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
UBE2D3-211ENST00000502404 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
UBE2D3-211ENST00000502404 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
UBE2D3-211ENST00000502404 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
UBE2D3-211ENST00000502404 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
UBE2D3-211ENST00000502404 EEA1Q15075 1411 aa18.64■□□□□ 0.57
UBE2D3-211ENST00000502404 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
UBE2D3-211ENST00000502404 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
UBE2D3-211ENST00000502404 ATP10BO94823 1461 aa18.59■□□□□ 0.57
UBE2D3-211ENST00000502404 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
UBE2D3-211ENST00000502404 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-211ENST00000502404 SAMD9Q5K651 1589 aa18.53■□□□□ 0.56
UBE2D3-211ENST00000502404 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
UBE2D3-211ENST00000502404 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
UBE2D3-211ENST00000502404 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-211ENST00000502404 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
UBE2D3-211ENST00000502404 ABCA9Q8IUA7 1624 aa18.47■□□□□ 0.55
UBE2D3-211ENST00000502404 NEO1Q92859 1461 aa18.46■□□□□ 0.55
UBE2D3-211ENST00000502404 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms