RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
LMNA-218ENST00000502357 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
LMNA-218ENST00000502357 MAPKBP1O60336 1514 aa22.84■■□□□ 1.25
LMNA-218ENST00000502357 ADCY10Q96PN6 1610 aa22.82■■□□□ 1.24
LMNA-218ENST00000502357 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
LMNA-218ENST00000502357 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
LMNA-218ENST00000502357 IGF1RP08069 1367 aa22.76■■□□□ 1.23
LMNA-218ENST00000502357 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
LMNA-218ENST00000502357 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
LMNA-218ENST00000502357 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
LMNA-218ENST00000502357 CUL7Q14999 1698 aa22.64■■□□□ 1.21
LMNA-218ENST00000502357 KDM6BO15054 1643 aa22.61■■□□□ 1.21
LMNA-218ENST00000502357 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
LMNA-218ENST00000502357 TSPOAP1O95153 1857 aa22.58■■□□□ 1.21
LMNA-218ENST00000502357 PTPRGP23470 1445 aa22.56■■□□□ 1.2
LMNA-218ENST00000502357 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
LMNA-218ENST00000502357 ABCC2Q92887 1545 aa22.52■■□□□ 1.2
LMNA-218ENST00000502357 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
LMNA-218ENST00000502357 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
LMNA-218ENST00000502357 GLI2P10070 1586 aa22.5■■□□□ 1.19
LMNA-218ENST00000502357 UHRF1BP1LA0JNW5 1464 aa22.48■■□□□ 1.19
LMNA-218ENST00000502357 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
LMNA-218ENST00000502357 DISP1Q96F81 1524 aa22.46■■□□□ 1.19
LMNA-218ENST00000502357 IQGAP2Q13576 1575 aa22.44■■□□□ 1.18
LMNA-218ENST00000502357 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
LMNA-218ENST00000502357 COL17A1Q9UMD9 1497 aaPredicted RBP22.43■■□□□ 1.18
LMNA-218ENST00000502357 CARMIL2Q6F5E8 1435 aa22.43■■□□□ 1.18
LMNA-218ENST00000502357 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
LMNA-218ENST00000502357 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
LMNA-218ENST00000502357 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
LMNA-218ENST00000502357 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
LMNA-218ENST00000502357 MAP3K4Q9Y6R4 1608 aa22.35■■□□□ 1.17
LMNA-218ENST00000502357 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
LMNA-218ENST00000502357 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
LMNA-218ENST00000502357 ZCCHC11Q5TAX3 1644 aaKnown RBP22.29■■□□□ 1.16
LMNA-218ENST00000502357 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
LMNA-218ENST00000502357 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
LMNA-218ENST00000502357 ILDR1Q86SU0 546 aaPredicted RBP22.25■■□□□ 1.15
LMNA-218ENST00000502357 TEX14Q8IWB6 1497 aa22.2■■□□□ 1.14
LMNA-218ENST00000502357 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
LMNA-218ENST00000502357 ABCA8O94911 1581 aa22.13■■□□□ 1.13
LMNA-218ENST00000502357 HECW2Q9P2P5 1572 aa22.13■■□□□ 1.13
LMNA-218ENST00000502357 MAGI3Q5TCQ9 1506 aa22.13■■□□□ 1.13
LMNA-218ENST00000502357 CTTNBP2Q8WZ74 1663 aa22.1■■□□□ 1.13
LMNA-218ENST00000502357 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
LMNA-218ENST00000502357 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
LMNA-218ENST00000502357 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
LMNA-218ENST00000502357 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
LMNA-218ENST00000502357 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
LMNA-218ENST00000502357 ARAP3Q8WWN8 1544 aa21.97■■□□□ 1.11
LMNA-218ENST00000502357 KIF21BO75037 1637 aa21.95■■□□□ 1.1
LMNA-218ENST00000502357 ATP10BO94823 1461 aa21.95■■□□□ 1.1
LMNA-218ENST00000502357 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.09
LMNA-218ENST00000502357 ADAMTSL3P82987 1691 aa21.87■■□□□ 1.09
LMNA-218ENST00000502357 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
LMNA-218ENST00000502357 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
LMNA-218ENST00000502357 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
LMNA-218ENST00000502357 P3H3Q8IVL6 736 aa21.81■■□□□ 1.08
LMNA-218ENST00000502357 FRMPD1Q5SYB0 1578 aa21.81■■□□□ 1.08
LMNA-218ENST00000502357 PTPRMP28827 1452 aa21.8■■□□□ 1.08
LMNA-218ENST00000502357 RAPGEF3O95398 923 aa21.79■■□□□ 1.08
LMNA-218ENST00000502357 NEO1Q92859 1461 aa21.77■■□□□ 1.08
LMNA-218ENST00000502357 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.07
LMNA-218ENST00000502357 BCORL1Q5H9F3 1711 aa21.75■■□□□ 1.07
LMNA-218ENST00000502357 NUP153P49790 1475 aaKnown RBP21.74■■□□□ 1.07
LMNA-218ENST00000502357 FBXO41Q8TF61 875 aa21.7■■□□□ 1.06
LMNA-218ENST00000502357 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
LMNA-218ENST00000502357 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
LMNA-218ENST00000502357 LMTK3Q96Q04 1460 aa21.67■■□□□ 1.06
LMNA-218ENST00000502357 RICTORQ6R327 1708 aa21.66■■□□□ 1.06
LMNA-218ENST00000502357 PCF11O94913 1555 aaKnown RBP21.64■■□□□ 1.05
LMNA-218ENST00000502357 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
LMNA-218ENST00000502357 ARHGEF40Q8TER5 1519 aa21.63■■□□□ 1.05
LMNA-218ENST00000502357 FHOD3Q2V2M9 1422 aa21.63■■□□□ 1.05
LMNA-218ENST00000502357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.05
LMNA-218ENST00000502357 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
LMNA-218ENST00000502357 AKNAQ7Z591 1439 aa21.6■■□□□ 1.05
LMNA-218ENST00000502357 DENND4BO75064 1496 aaPredicted RBP21.59■■□□□ 1.05
LMNA-218ENST00000502357 RIMS1Q86UR5 1692 aaKnown RBP21.57■■□□□ 1.04
LMNA-218ENST00000502357 ZMYM4Q5VZL5 1548 aa21.56■■□□□ 1.04
LMNA-218ENST00000502357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
LMNA-218ENST00000502357 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
LMNA-218ENST00000502357 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
LMNA-218ENST00000502357 FANCAO15360 1455 aa21.55■■□□□ 1.04
LMNA-218ENST00000502357 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
LMNA-218ENST00000502357 YEATS2Q9ULM3 1422 aa21.54■■□□□ 1.04
LMNA-218ENST00000502357 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
LMNA-218ENST00000502357 EEA1Q15075 1411 aa21.51■■□□□ 1.03
LMNA-218ENST00000502357 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
LMNA-218ENST00000502357 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
LMNA-218ENST00000502357 MAGI2Q86UL8 1455 aa21.47■■□□□ 1.03
LMNA-218ENST00000502357 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
LMNA-218ENST00000502357 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
LMNA-218ENST00000502357 HSPA2P54652 639 aa21.47■■□□□ 1.03
LMNA-218ENST00000502357 EFCAB5A4FU69 1503 aa21.46■■□□□ 1.03
LMNA-218ENST00000502357 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
LMNA-218ENST00000502357 PLCH2O75038 1416 aa21.45■■□□□ 1.02
LMNA-218ENST00000502357 POGZQ7Z3K3 1410 aa21.43■■□□□ 1.02
LMNA-218ENST00000502357 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
LMNA-218ENST00000502357 ARHGEF12Q9NZN5 1544 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms