RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 KIAA0586Q9BVV6 1533 aa26.83■■□□□ 1.89
LMNA-217ENST00000498722 EEA1Q15075 1411 aa26.83■■□□□ 1.89
LMNA-217ENST00000498722 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
LMNA-217ENST00000498722 CYB5RLQ6IPT4 315 aa26.83■■□□□ 1.89
LMNA-217ENST00000498722 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
LMNA-217ENST00000498722 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
LMNA-217ENST00000498722 JPH4Q96JJ6 628 aa26.79■■□□□ 1.88
LMNA-217ENST00000498722 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
LMNA-217ENST00000498722 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
LMNA-217ENST00000498722 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
LMNA-217ENST00000498722 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
LMNA-217ENST00000498722 KIF21BO75037 1637 aa26.62■■□□□ 1.85
LMNA-217ENST00000498722 CARMIL2Q6F5E8 1435 aa26.59■■□□□ 1.85
LMNA-217ENST00000498722 UGGT2Q9NYU1 1516 aa26.56■■□□□ 1.84
LMNA-217ENST00000498722 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
LMNA-217ENST00000498722 TTBK1Q5TCY1 1321 aaPredicted RBP26.53■■□□□ 1.84
LMNA-217ENST00000498722 KIAA0556O60303 1618 aa26.51■■□□□ 1.83
LMNA-217ENST00000498722 DISP1Q96F81 1524 aa26.5■■□□□ 1.83
LMNA-217ENST00000498722 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
LMNA-217ENST00000498722 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
LMNA-217ENST00000498722 PTPRGP23470 1445 aa26.45■■□□□ 1.82
LMNA-217ENST00000498722 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
LMNA-217ENST00000498722 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
LMNA-217ENST00000498722 ADCY10Q96PN6 1610 aa26.4■■□□□ 1.82
LMNA-217ENST00000498722 SAMD9Q5K651 1589 aa26.33■■□□□ 1.81
LMNA-217ENST00000498722 TRHP20396 242 aaPredicted RBP26.32■■□□□ 1.8
LMNA-217ENST00000498722 P3H3Q8IVL6 736 aa26.32■■□□□ 1.8
LMNA-217ENST00000498722 NPM1P06748 294 aaKnown RBP eCLIP26.31■■□□□ 1.8
LMNA-217ENST00000498722 UACAQ9BZF9 1416 aa26.26■■□□□ 1.79
LMNA-217ENST00000498722 ABCC2Q92887 1545 aa26.24■■□□□ 1.79
LMNA-217ENST00000498722 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
LMNA-217ENST00000498722 UHRF1BP1LA0JNW5 1464 aa26.21■■□□□ 1.79
LMNA-217ENST00000498722 PLB1Q6P1J6 1458 aa26.2■■□□□ 1.78
LMNA-217ENST00000498722 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
LMNA-217ENST00000498722 MAPKBP1O60336 1514 aa26.17■■□□□ 1.78
LMNA-217ENST00000498722 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
LMNA-217ENST00000498722 ABCA8O94911 1581 aa26.17■■□□□ 1.78
LMNA-217ENST00000498722 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
LMNA-217ENST00000498722 RAPGEF6Q8TEU7 1601 aa26.12■■□□□ 1.77
LMNA-217ENST00000498722 KDM5BQ9UGL1 1544 aa26.09■■□□□ 1.77
LMNA-217ENST00000498722 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
LMNA-217ENST00000498722 ASXL2Q76L83 1435 aa26.04■■□□□ 1.76
LMNA-217ENST00000498722 DIP2BQ9P265 1576 aa26.04■■□□□ 1.76
LMNA-217ENST00000498722 ARID3CA6NKF2 412 aa26.04■■□□□ 1.76
LMNA-217ENST00000498722 ABCC10Q5T3U5 1492 aa26.02■■□□□ 1.76
LMNA-217ENST00000498722 TSPOAP1O95153 1857 aa26.01■■□□□ 1.75
LMNA-217ENST00000498722 FAM69CQ0P6D2 419 aa25.99■■□□□ 1.75
LMNA-217ENST00000498722 CLIP1P30622 1438 aa25.97■■□□□ 1.75
LMNA-217ENST00000498722 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
LMNA-217ENST00000498722 NUP153P49790 1475 aaKnown RBP25.94■■□□□ 1.74
LMNA-217ENST00000498722 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
LMNA-217ENST00000498722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
LMNA-217ENST00000498722 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
LMNA-217ENST00000498722 ATP10BO94823 1461 aa25.93■■□□□ 1.74
LMNA-217ENST00000498722 WDR7Q9Y4E6 1490 aa25.93■■□□□ 1.74
LMNA-217ENST00000498722 ATP1B4Q9UN42 357 aaPredicted RBP25.91■■□□□ 1.74
LMNA-217ENST00000498722 HECW1Q76N89 1606 aa25.91■■□□□ 1.74
LMNA-217ENST00000498722 EPRSP07814 1512 aaKnown RBP25.88■■□□□ 1.73
LMNA-217ENST00000498722 CEP162Q5TB80 1403 aa25.86■■□□□ 1.73
LMNA-217ENST00000498722 GLI2P10070 1586 aa25.86■■□□□ 1.73
LMNA-217ENST00000498722 KCNH8Q96L42 1107 aa25.85■■□□□ 1.73
LMNA-217ENST00000498722 PCF11O94913 1555 aaKnown RBP25.84■■□□□ 1.73
LMNA-217ENST00000498722 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
LMNA-217ENST00000498722 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.72
LMNA-217ENST00000498722 MAP3K4Q9Y6R4 1608 aa25.82■■□□□ 1.72
LMNA-217ENST00000498722 CFAP43Q8NDM7 1665 aa25.79■■□□□ 1.72
LMNA-217ENST00000498722 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
LMNA-217ENST00000498722 CASKIN1Q8WXD9 1431 aa25.75■■□□□ 1.71
LMNA-217ENST00000498722 PLEKHD1A6NEE1 506 aa25.74■■□□□ 1.71
LMNA-217ENST00000498722 FYCO1Q9BQS8 1478 aa25.73■■□□□ 1.71
LMNA-217ENST00000498722 ABCA9Q8IUA7 1624 aa25.69■■□□□ 1.7
LMNA-217ENST00000498722 CCDC18Q5T9S5 1454 aa25.68■■□□□ 1.7
LMNA-217ENST00000498722 CD109Q6YHK3 1445 aa25.67■■□□□ 1.7
LMNA-217ENST00000498722 KDM6BO15054 1643 aa25.66■■□□□ 1.7
LMNA-217ENST00000498722 TEX14Q8IWB6 1497 aa25.66■■□□□ 1.7
LMNA-217ENST00000498722 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
LMNA-217ENST00000498722 TTC37Q6PGP7 1564 aa25.6■■□□□ 1.69
LMNA-217ENST00000498722 KIF14Q15058 1648 aa25.59■■□□□ 1.69
LMNA-217ENST00000498722 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.69
LMNA-217ENST00000498722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.58■■□□□ 1.699e-7■■□□□ 11.4
LMNA-217ENST00000498722 MYO5CQ9NQX4 1742 aa25.55■■□□□ 1.68
LMNA-217ENST00000498722 TROQ12816 1431 aaPredicted RBP25.55■■□□□ 1.68
LMNA-217ENST00000498722 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
LMNA-217ENST00000498722 CFAP74Q9C0B2 1584 aa25.48■■□□□ 1.67
LMNA-217ENST00000498722 MTUS2Q5JR59 1369 aa25.44■■□□□ 1.66
LMNA-217ENST00000498722 NEO1Q92859 1461 aa25.43■■□□□ 1.66
LMNA-217ENST00000498722 FANCAO15360 1455 aa25.42■■□□□ 1.66
LMNA-217ENST00000498722 COL17A1Q9UMD9 1497 aaPredicted RBP25.42■■□□□ 1.66
LMNA-217ENST00000498722 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
LMNA-217ENST00000498722 CDC42BPAQ5VT25 1732 aa25.41■■□□□ 1.66
LMNA-217ENST00000498722 CDC42BPBQ9Y5S2 1711 aa25.41■■□□□ 1.66
LMNA-217ENST00000498722 EHBP1L1Q8N3D4 1523 aa25.4■■□□□ 1.66
LMNA-217ENST00000498722 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
LMNA-217ENST00000498722 PREX2Q70Z35 1606 aa25.38■■□□□ 1.65
LMNA-217ENST00000498722 ARHGAP5Q13017 1502 aa25.38■■□□□ 1.65
LMNA-217ENST00000498722 PLCH2O75038 1416 aa25.38■■□□□ 1.65
LMNA-217ENST00000498722 PHLDB1Q86UU1 1377 aa25.38■■□□□ 1.65
LMNA-217ENST00000498722 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
LMNA-217ENST00000498722 AKNAQ7Z591 1439 aa25.34■■□□□ 1.65
LMNA-217ENST00000498722 SUPT6HQ7KZ85 1726 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms