RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
LMBR1-219ENST00000498034 CUL7Q14999 1698 aa35.24■■■■□ 3.23
LMBR1-219ENST00000498034 KIAA0586Q9BVV6 1533 aa35.13■■■■□ 3.21
LMBR1-219ENST00000498034 CARMIL1Q5VZK9 1371 aa35.13■■■■□ 3.21
LMBR1-219ENST00000498034 ADCY10Q96PN6 1610 aa34.85■■■■□ 3.17
LMBR1-219ENST00000498034 NPM1P06748 294 aaKnown RBP eCLIP34.84■■■■□ 3.17
LMBR1-219ENST00000498034 IQGAP2Q13576 1575 aa34.83■■■■□ 3.17
LMBR1-219ENST00000498034 KIF13AQ9H1H9 1805 aa34.82■■■■□ 3.16
LMBR1-219ENST00000498034 RAPGEF2Q9Y4G8 1499 aa34.82■■■■□ 3.16
LMBR1-219ENST00000498034 TTBK1Q5TCY1 1321 aaPredicted RBP34.78■■■■□ 3.16
LMBR1-219ENST00000498034 PTPRGP23470 1445 aa34.77■■■■□ 3.16
LMBR1-219ENST00000498034 CARMIL2Q6F5E8 1435 aa34.77■■■■□ 3.16
LMBR1-219ENST00000498034 MAPKBP1O60336 1514 aa34.73■■■■□ 3.15
LMBR1-219ENST00000498034 TNIKQ9UKE5 1360 aa34.73■■■■□ 3.15
LMBR1-219ENST00000498034 ABCC10Q5T3U5 1492 aa34.7■■■■□ 3.15
LMBR1-219ENST00000498034 FAM69CQ0P6D2 419 aa34.69■■■■□ 3.14
LMBR1-219ENST00000498034 DISP1Q96F81 1524 aa34.66■■■■□ 3.14
LMBR1-219ENST00000498034 DIP2BQ9P265 1576 aa34.62■■■■□ 3.13
LMBR1-219ENST00000498034 UGGT2Q9NYU1 1516 aa34.61■■■■□ 3.13
LMBR1-219ENST00000498034 ABCC2Q92887 1545 aa34.54■■■■□ 3.12
LMBR1-219ENST00000498034 CTTNBP2Q8WZ74 1663 aa34.52■■■■□ 3.12
LMBR1-219ENST00000498034 PRXQ9BXM0 1461 aa34.52■■■■□ 3.12
LMBR1-219ENST00000498034 KIAA0556O60303 1618 aa34.52■■■■□ 3.12
LMBR1-219ENST00000498034 UACAQ9BZF9 1416 aa34.51■■■■□ 3.12
LMBR1-219ENST00000498034 UHRF1BP1LA0JNW5 1464 aa34.5■■■■□ 3.11
LMBR1-219ENST00000498034 ASXL2Q76L83 1435 aa34.42■■■■□ 3.1
LMBR1-219ENST00000498034 TSPOAP1O95153 1857 aa34.4■■■■□ 3.1
LMBR1-219ENST00000498034 PLB1Q6P1J6 1458 aa34.37■■■■□ 3.09
LMBR1-219ENST00000498034 KDM5BQ9UGL1 1544 aa34.35■■■■□ 3.09
LMBR1-219ENST00000498034 GOLGA3Q08378 1498 aa34.34■■■■□ 3.09
LMBR1-219ENST00000498034 CSRNP3Q8WYN3 585 aa34.34■■■■□ 3.09
LMBR1-219ENST00000498034 AEBP2Q6ZN18 517 aaPredicted RBP34.33■■■■□ 3.09
LMBR1-219ENST00000498034 ZCCHC11Q5TAX3 1644 aaKnown RBP34.3■■■■□ 3.08
LMBR1-219ENST00000498034 GLI2P10070 1586 aa34.27■■■■□ 3.08
LMBR1-219ENST00000498034 KDM6BO15054 1643 aa34.26■■■■□ 3.07
LMBR1-219ENST00000498034 EPRSP07814 1512 aaKnown RBP34.2■■■■□ 3.07
LMBR1-219ENST00000498034 ABCA8O94911 1581 aa34.19■■■■□ 3.06
LMBR1-219ENST00000498034 PPRC1Q5VV67 1664 aaKnown RBP34.19■■■■□ 3.06
LMBR1-219ENST00000498034 EEA1Q15075 1411 aa34.18■■■■□ 3.06
LMBR1-219ENST00000498034 P3H3Q8IVL6 736 aa34.16■■■■□ 3.06
LMBR1-219ENST00000498034 FAM9AQ8IZU1 332 aaPredicted RBP34.14■■■■□ 3.06
LMBR1-219ENST00000498034 WDR7Q9Y4E6 1490 aa34.1■■■■□ 3.05
LMBR1-219ENST00000498034 MAP3K4Q9Y6R4 1608 aa34.1■■■■□ 3.05
LMBR1-219ENST00000498034 SAMD9Q5K651 1589 aa34.03■■■■□ 3.04
LMBR1-219ENST00000498034 KCNH8Q96L42 1107 aa34■■■■□ 3.03
LMBR1-219ENST00000498034 ARID3CA6NKF2 412 aa33.99■■■■□ 3.03
LMBR1-219ENST00000498034 RANGAP1P46060 587 aaPredicted RBP33.99■■■■□ 3.03
LMBR1-219ENST00000498034 TEX14Q8IWB6 1497 aa33.97■■■■□ 3.03
LMBR1-219ENST00000498034 COL17A1Q9UMD9 1497 aaPredicted RBP33.95■■■■□ 3.03
LMBR1-219ENST00000498034 CHIC1Q5VXU3 224 aa33.94■■■■□ 3.02
LMBR1-219ENST00000498034 ATP10BO94823 1461 aa33.92■■■■□ 3.02
LMBR1-219ENST00000498034 KIF21BO75037 1637 aa33.91■■■■□ 3.02
LMBR1-219ENST00000498034 CD109Q6YHK3 1445 aa33.89■■■■□ 3.02
LMBR1-219ENST00000498034 CFAP43Q8NDM7 1665 aa33.88■■■■□ 3.01
LMBR1-219ENST00000498034 RAPGEF6Q8TEU7 1601 aa33.86■■■■□ 3.01
LMBR1-219ENST00000498034 KDM4FA0A1W2PPD8 638 aa33.85■■■■□ 3.01
LMBR1-219ENST00000498034 FHOD3Q2V2M9 1422 aa33.85■■■■□ 3.01
LMBR1-219ENST00000498034 MAGI3Q5TCQ9 1506 aa33.83■■■■□ 3.01
LMBR1-219ENST00000498034 EHMT2Q96KQ7 1210 aa33.8■■■■□ 3
LMBR1-219ENST00000498034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.76■■■□□ 2.99
LMBR1-219ENST00000498034 HNRNPUL2Q1KMD3 747 aaKnown RBP33.76■■■□□ 2.99
LMBR1-219ENST00000498034 NUP153P49790 1475 aaKnown RBP33.75■■■□□ 2.99
LMBR1-219ENST00000498034 EFCAB5A4FU69 1503 aa33.72■■■□□ 2.99
LMBR1-219ENST00000498034 UBTFP17480 764 aaKnown RBP33.7■■■□□ 2.99
LMBR1-219ENST00000498034 ABCA9Q8IUA7 1624 aa33.67■■■□□ 2.98
LMBR1-219ENST00000498034 ADGRL1O94910 1474 aa33.61■■■□□ 2.97
LMBR1-219ENST00000498034 PLEKHD1A6NEE1 506 aa33.56■■■□□ 2.96
LMBR1-219ENST00000498034 ARAP3Q8WWN8 1544 aa33.56■■■□□ 2.96
LMBR1-219ENST00000498034 ARHGAP35Q9NRY4 1499 aa33.5■■■□□ 2.95
LMBR1-219ENST00000498034 PHLDB1Q86UU1 1377 aa33.49■■■□□ 2.95
LMBR1-219ENST00000498034 CDK13Q14004 1512 aaKnown RBP33.47■■■□□ 2.95
LMBR1-219ENST00000498034 NEO1Q92859 1461 aa33.46■■■□□ 2.95
LMBR1-219ENST00000498034 ATP1B4Q9UN42 357 aaPredicted RBP33.43■■■□□ 2.94
LMBR1-219ENST00000498034 FMN1Q68DA7 1419 aa33.43■■■□□ 2.94
LMBR1-219ENST00000498034 RAPGEF3O95398 923 aa33.42■■■□□ 2.94
LMBR1-219ENST00000498034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.41■■■□□ 2.941e-6■■■□□ 16.9
LMBR1-219ENST00000498034 HECW1Q76N89 1606 aa33.36■■■□□ 2.93
LMBR1-219ENST00000498034 TTC37Q6PGP7 1564 aa33.35■■■□□ 2.93
LMBR1-219ENST00000498034 FRMPD1Q5SYB0 1578 aa33.32■■■□□ 2.92
LMBR1-219ENST00000498034 FANCAO15360 1455 aa33.3■■■□□ 2.92
LMBR1-219ENST00000498034 AKNAQ7Z591 1439 aa33.29■■■□□ 2.92
LMBR1-219ENST00000498034 CFAP74Q9C0B2 1584 aa33.25■■■□□ 2.91
LMBR1-219ENST00000498034 DENND4BO75064 1496 aaPredicted RBP33.25■■■□□ 2.91
LMBR1-219ENST00000498034 CDK11AQ9UQ88 783 aaPredicted RBP33.22■■■□□ 2.91
LMBR1-219ENST00000498034 RICTORQ6R327 1708 aa33.21■■■□□ 2.91
LMBR1-219ENST00000498034 LRRIQ1Q96JM4 1722 aa33.2■■■□□ 2.91
LMBR1-219ENST00000498034 PLCH2O75038 1416 aa33.19■■■□□ 2.9
LMBR1-219ENST00000498034 KIF14Q15058 1648 aa33.15■■■□□ 2.9
LMBR1-219ENST00000498034 TROQ12816 1431 aaPredicted RBP33.14■■■□□ 2.9
LMBR1-219ENST00000498034 PCF11O94913 1555 aaKnown RBP33.12■■■□□ 2.89
LMBR1-219ENST00000498034 ARHGEF40Q8TER5 1519 aa33.11■■■□□ 2.89
LMBR1-219ENST00000498034 MYO5CQ9NQX4 1742 aa33.11■■■□□ 2.89
LMBR1-219ENST00000498034 CASKIN1Q8WXD9 1431 aa33.11■■■□□ 2.89
LMBR1-219ENST00000498034 ARID4BQ4LE39 1312 aaPredicted RBP33.1■■■□□ 2.89
LMBR1-219ENST00000498034 ADAMTSL3P82987 1691 aa33.1■■■□□ 2.89
LMBR1-219ENST00000498034 SCAPERQ9BY12 1400 aa33.09■■■□□ 2.89
LMBR1-219ENST00000498034 CLIP1P30622 1438 aa33.08■■■□□ 2.89
LMBR1-219ENST00000498034 EFCAB2Q5VUJ9 269 aa33.07■■■□□ 2.88
LMBR1-219ENST00000498034 HECW2Q9P2P5 1572 aa33.07■■■□□ 2.88
LMBR1-219ENST00000498034 ZMYM4Q5VZL5 1548 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms